| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is 121610403
Identifier: 121610403
GI number: 121610403
Start: 3841595
End: 3841879
Strand: Direct
Name: 121610403
Synonym: Veis_3471
Alternate gene names: NA
Gene position: 3841595-3841879 (Clockwise)
Preceding gene: 121610402
Following gene: 121610404
Centisome position: 69.01
GC content: 55.44
Gene sequence:
>285_bases ATGGAAAACAAACACATCGGCAGCAATTTCGACGATTTTCTGGCCGAGGAAGCTTTATTGGAAGACGCGATGGCGACGGC TATGAAGCGGGTCATTGCCTGGCAGATTGAGCAGGAAATGAAAGCACAGAAGCTTTCCAAGACGGCCATGGCCACCAAGA TGCATACCAGCCGTGCGGCGCTGAATCGGTTGCTCGATGCCACTGATACCAGCCTGACCCTGACAACGCTGGCCAGCGCC GCTGCCGCTTTGGGAAAGCGGGTCCGGGTAGAGTTGGTTGTTTGA
Upstream 100 bases:
>100_bases TGGTGCTGCTCCATGGGTTCATCAAAAAATCCAGCAGCACCCCGGCGGATGACCTCGCGCTCGCGAAAAACCGACTAAAA CAAGTCAAGGAGTGAAGACC
Downstream 100 bases:
>100_bases TTCCAGCATGTCAGGCTGAGGTATAGCTCGCCAGCGTCGTGAGCGCCTTTTCAAACGTCCGAAAGCGCACCGGGCGGCCT TCGTGGGTGATGGCGTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MENKHIGSNFDDFLAEEALLEDAMATAMKRVIAWQIEQEMKAQKLSKTAMATKMHTSRAALNRLLDATDTSLTLTTLASA AAALGKRVRVELVV
Sequences:
>Translated_94_residues MENKHIGSNFDDFLAEEALLEDAMATAMKRVIAWQIEQEMKAQKLSKTAMATKMHTSRAALNRLLDATDTSLTLTTLASA AAALGKRVRVELVV >Mature_94_residues MENKHIGSNFDDFLAEEALLEDAMATAMKRVIAWQIEQEMKAQKLSKTAMATKMHTSRAALNRLLDATDTSLTLTTLASA AAALGKRVRVELVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10305; Mature: 10305
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKHIGSNFDDFLAEEALLEDAMATAMKRVIAWQIEQEMKAQKLSKTAMATKMHTSRAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNRLLDATDTSLTLTTLASAAAALGKRVRVELVV HHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEC >Mature Secondary Structure MENKHIGSNFDDFLAEEALLEDAMATAMKRVIAWQIEQEMKAQKLSKTAMATKMHTSRAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNRLLDATDTSLTLTTLASAAAALGKRVRVELVV HHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA