Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

Click here to switch to the map view.

The map label for this gene is 121610398

Identifier: 121610398

GI number: 121610398

Start: 3838508

End: 3839500

Strand: Direct

Name: 121610398

Synonym: Veis_3466

Alternate gene names: NA

Gene position: 3838508-3839500 (Clockwise)

Preceding gene: 121610397

Following gene: 121610402

Centisome position: 68.95

GC content: 67.17

Gene sequence:

>993_bases
ATGTCTGCCTCCCCCAACACCGCCGGCAACCCGGACCCCGAGGGCGAGTACGAAGACCTGCTGGGCCTGTGGTCCGATCT
GGAATCGGGGCTGTCCGCGCTGCTGTCCTGGCCATTGCAGGCGCAGGACTTTGCGCAAAAGCTGCGGCAGTTCGATGCCT
GGTTGCAGGACCTGGTGGCGCACGACATCGATGCCGCGCTGTACCTGATGTTTCAGTTGGCGTCGACCTCCACCGTCGGC
TACAGCGCTTCGCACGCACTGGTTTGCGGCACGCTGTGCCACATCATGGCGCATGAGCTGCAACTGCCCCGGCCAGAGCG
CGACAGCCTGGTGCGGGCCGCGCTGACGATGAACATCGGCATGACCGCGCTGCAAAACGAACTGGCCGAACAACGCGAAC
GCCCCAGCGCCATGCAGCAGCAGGCGATCGACAAGCATCCCGCTGCGGGCCAGGCCCTGCTCGAGCGGCTGCACATCACC
GACGCGCTGTGGCTGGCGGTCGTCGGACAGCACCACGCCAGCAGCGCGCAGCGCGTGCCGCTGGCCACGCAGACAGCGCC
AGCGCGGCTGGCGCGCATCCTGGGCACCATAGACCGCTACGCGGCGATGATCAGCCCGCGAAAATCACGCGCCGGGCGCA
GCGCCACCGACTCGGTGCGCGCCATCGTGGGACAGCAAGTCGATCAGCGCGACGAACTCAGCCATGCGCTGGTGCGCTGC
ATCGGACTATGCCCTCCGGGCACCTTCGTCAAGCTGGACAACGGCGATACGGCCCTCGTGCTGCGCCGCAGCGACAAGCC
CAACCATCCGCTGGTGGCCAGCCTGCTCGAACGCAACGGCAGCCCGTATTCCCGGCCCAGCCTGTACCAGACCGCGAGCG
GAAAACCCCGCATACAGTTCGCGCTGGCACGCTCTGCCGTGAGCCTGGAACTCGACCACCGCACCATGGTGCGCCTGGGC
TTGTATGCAGCGCAGGCCTGTGTCGACGAATGA

Upstream 100 bases:

>100_bases
CCATGCCCTATGTGCTGCTGGGCAACAGCTTTCTGACCGAGTTTCAAATGACCCGCATCAACGACCGGTTGGTGCTGGAA
AAACGCCAGTGAGGGCCGCC

Downstream 100 bases:

>100_bases
CCGGATGGGTCACCGAACGGCTTTGCGCCCCCCCAGGCGCGCCTCCTTGCCCGCGATCAGCCGCCGGATATTGTCCCTGT
GCCGCCAGGCCAGCAGCAGC

Product: putative metal dependent phosphohydrolase

Products: NA

Alternate protein names: HD-GYP Domain-Containing Protein; HD-GYP Domain-Like Protein

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MSASPNTAGNPDPEGEYEDLLGLWSDLESGLSALLSWPLQAQDFAQKLRQFDAWLQDLVAHDIDAALYLMFQLASTSTVG
YSASHALVCGTLCHIMAHELQLPRPERDSLVRAALTMNIGMTALQNELAEQRERPSAMQQQAIDKHPAAGQALLERLHIT
DALWLAVVGQHHASSAQRVPLATQTAPARLARILGTIDRYAAMISPRKSRAGRSATDSVRAIVGQQVDQRDELSHALVRC
IGLCPPGTFVKLDNGDTALVLRRSDKPNHPLVASLLERNGSPYSRPSLYQTASGKPRIQFALARSAVSLELDHRTMVRLG
LYAAQACVDE

Sequences:

>Translated_330_residues
MSASPNTAGNPDPEGEYEDLLGLWSDLESGLSALLSWPLQAQDFAQKLRQFDAWLQDLVAHDIDAALYLMFQLASTSTVG
YSASHALVCGTLCHIMAHELQLPRPERDSLVRAALTMNIGMTALQNELAEQRERPSAMQQQAIDKHPAAGQALLERLHIT
DALWLAVVGQHHASSAQRVPLATQTAPARLARILGTIDRYAAMISPRKSRAGRSATDSVRAIVGQQVDQRDELSHALVRC
IGLCPPGTFVKLDNGDTALVLRRSDKPNHPLVASLLERNGSPYSRPSLYQTASGKPRIQFALARSAVSLELDHRTMVRLG
LYAAQACVDE
>Mature_329_residues
SASPNTAGNPDPEGEYEDLLGLWSDLESGLSALLSWPLQAQDFAQKLRQFDAWLQDLVAHDIDAALYLMFQLASTSTVGY
SASHALVCGTLCHIMAHELQLPRPERDSLVRAALTMNIGMTALQNELAEQRERPSAMQQQAIDKHPAAGQALLERLHITD
ALWLAVVGQHHASSAQRVPLATQTAPARLARILGTIDRYAAMISPRKSRAGRSATDSVRAIVGQQVDQRDELSHALVRCI
GLCPPGTFVKLDNGDTALVLRRSDKPNHPLVASLLERNGSPYSRPSLYQTASGKPRIQFALARSAVSLELDHRTMVRLGL
YAAQACVDE

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35979; Mature: 35848

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASPNTAGNPDPEGEYEDLLGLWSDLESGLSALLSWPLQAQDFAQKLRQFDAWLQDLVA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
HDIDAALYLMFQLASTSTVGYSASHALVCGTLCHIMAHELQLPRPERDSLVRAALTMNIG
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
MTALQNELAEQRERPSAMQQQAIDKHPAAGQALLERLHITDALWLAVVGQHHASSAQRVP
HHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LATQTAPARLARILGTIDRYAAMISPRKSRAGRSATDSVRAIVGQQVDQRDELSHALVRC
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
IGLCPPGTFVKLDNGDTALVLRRSDKPNHPLVASLLERNGSPYSRPSLYQTASGKPRIQF
HHCCCCCCEEEECCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCCEEH
ALARSAVSLELDHRTMVRLGLYAAQACVDE
HHHHHHHEEEECHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SASPNTAGNPDPEGEYEDLLGLWSDLESGLSALLSWPLQAQDFAQKLRQFDAWLQDLVA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
HDIDAALYLMFQLASTSTVGYSASHALVCGTLCHIMAHELQLPRPERDSLVRAALTMNIG
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
MTALQNELAEQRERPSAMQQQAIDKHPAAGQALLERLHITDALWLAVVGQHHASSAQRVP
HHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LATQTAPARLARILGTIDRYAAMISPRKSRAGRSATDSVRAIVGQQVDQRDELSHALVRC
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
IGLCPPGTFVKLDNGDTALVLRRSDKPNHPLVASLLERNGSPYSRPSLYQTASGKPRIQF
HHCCCCCCEEEECCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCCCEEH
ALARSAVSLELDHRTMVRLGLYAAQACVDE
HHHHHHHEEEECHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA