| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609866
Identifier: 121609866
GI number: 121609866
Start: 3266723
End: 3267691
Strand: Direct
Name: 121609866
Synonym: Veis_2919
Alternate gene names: NA
Gene position: 3266723-3267691 (Clockwise)
Preceding gene: 121609857
Following gene: 121609867
Centisome position: 58.68
GC content: 68.11
Gene sequence:
>969_bases GTGAAAAAACGCGCTTTCGTCCAACTGCTGGGGGCTGCGGCCTGGACCGGGCCGGTCGCGCTGGCGCAGGCCCAGGAGCC GTGGCCCGGCCGCCCGATCAAGGTCATCGTTCCGGTGACCGCCGGCGGCACGGCCGATGTCCTGGCGCGTGAATTTGGCC GGCGGCTCGGCGAACGCTTGGGGCAGCCGGTGGTGGTGGAAAACCGGCCTGGCGCCAACGGCATTCCGGCCACGCTGGCG GTGGCGCGCGCACCCGCCGATGGCTACACGCTGCTGCTGACGCTGACCCAGCATATCCAGAACCCGGTGCAGTTCAAGGA CGCAGGCTATGACCCGATCGCCGATTTCACGCCGCTGTGCCGCATCGGTGCGGCGGCGACCGTGCTGGCGGCCCGCGCCA GCCTGAAGGTCGACTCCGCGACCGAGTTGGCGCAGTTCGCGCCCGGCAAAGGGCTTACCTTCGGCACCACGGCGCTCGGC CCCCAGGTCATTTTGGAGGTGTTCAACCAGTCGGCCAAGCTGGAGATGCTCAACGTGCCCTACAAGGGCGAAGCGCCGGC ACTGACCGACCTGCTCGGTGGCCAGATCGACATGGCGCTGCTGACGGTGGCCACGGCACGCGCGCATATCCAGCGCGGCA CGCTCAAGGGACTGGCGGTGATTGCGCCCAAGCGCGCGTCTTCGCTGCCGCATGTGGCCACGTTCCTGGAGCAGGGTTTC AAGGAGGTCAACTGGACCGGCGGCTGGTACGCCTTCATGGCGCCGGCCAAGCTGCCGCCCGCAATCGCCGCCCGGCTGGT GCAGGAACTGCGCGTCATTGGCGAGGATGCGGCCATGCGCAAGCTGTTCGACGAGCTGAACATCACGGTCAACTGGATGG ACGGCCCGGAGTTTCAGCCGGTGATGAAGCGCGACATGGAACTGTGGCGCTCGCTGGTGCAGCGCTCGGGCGTGGTGATC GAGCGATGA
Upstream 100 bases:
>100_bases GCTGCGTTGGGGGTCCTCGGGAATCCGGGGCCGCCAGTGTCGGATCGCCGGCAAAAACCAAGCATGACGAACAACCAAGC ATGACGAACAAGGAGACAGG
Downstream 100 bases:
>100_bases GCCTGCACGGCAAGACGGCCTTCGTCACCGGGGCCGGTTCGGGCATTGGCCAGGCCACGGCCATGGCGTTCGCGCAGGCC GGCGCCTGGGTGCTGCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF5 [H]
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MKKRAFVQLLGAAAWTGPVALAQAQEPWPGRPIKVIVPVTAGGTADVLAREFGRRLGERLGQPVVVENRPGANGIPATLA VARAPADGYTLLLTLTQHIQNPVQFKDAGYDPIADFTPLCRIGAAATVLAARASLKVDSATELAQFAPGKGLTFGTTALG PQVILEVFNQSAKLEMLNVPYKGEAPALTDLLGGQIDMALLTVATARAHIQRGTLKGLAVIAPKRASSLPHVATFLEQGF KEVNWTGGWYAFMAPAKLPPAIAARLVQELRVIGEDAAMRKLFDELNITVNWMDGPEFQPVMKRDMELWRSLVQRSGVVI ER
Sequences:
>Translated_322_residues MKKRAFVQLLGAAAWTGPVALAQAQEPWPGRPIKVIVPVTAGGTADVLAREFGRRLGERLGQPVVVENRPGANGIPATLA VARAPADGYTLLLTLTQHIQNPVQFKDAGYDPIADFTPLCRIGAAATVLAARASLKVDSATELAQFAPGKGLTFGTTALG PQVILEVFNQSAKLEMLNVPYKGEAPALTDLLGGQIDMALLTVATARAHIQRGTLKGLAVIAPKRASSLPHVATFLEQGF KEVNWTGGWYAFMAPAKLPPAIAARLVQELRVIGEDAAMRKLFDELNITVNWMDGPEFQPVMKRDMELWRSLVQRSGVVI ER >Mature_322_residues MKKRAFVQLLGAAAWTGPVALAQAQEPWPGRPIKVIVPVTAGGTADVLAREFGRRLGERLGQPVVVENRPGANGIPATLA VARAPADGYTLLLTLTQHIQNPVQFKDAGYDPIADFTPLCRIGAAATVLAARASLKVDSATELAQFAPGKGLTFGTTALG PQVILEVFNQSAKLEMLNVPYKGEAPALTDLLGGQIDMALLTVATARAHIQRGTLKGLAVIAPKRASSLPHVATFLEQGF KEVNWTGGWYAFMAPAKLPPAIAARLVQELRVIGEDAAMRKLFDELNITVNWMDGPEFQPVMKRDMELWRSLVQRSGVVI ER
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34585; Mature: 34585
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRAFVQLLGAAAWTGPVALAQAQEPWPGRPIKVIVPVTAGGTADVLAREFGRRLGERL CCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC GQPVVVENRPGANGIPATLAVARAPADGYTLLLTLTQHIQNPVQFKDAGYDPIADFTPLC CCCEEEECCCCCCCCCHHHHEEECCCCCEEHHHHHHHHHCCCCEECCCCCCCCCCCHHHH RIGAAATVLAARASLKVDSATELAQFAPGKGLTFGTTALGPQVILEVFNQSAKLEMLNVP HHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHCCHHHHHHHHCCCCCEEEEECC YKGEAPALTDLLGGQIDMALLTVATARAHIQRGTLKGLAVIAPKRASSLPHVATFLEQGF CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHCCCHHHHHHHHHHH KEVNWTGGWYAFMAPAKLPPAIAARLVQELRVIGEDAAMRKLFDELNITVNWMDGPEFQP HHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCCCH VMKRDMELWRSLVQRSGVVIER HHHHHHHHHHHHHHHCCCEECC >Mature Secondary Structure MKKRAFVQLLGAAAWTGPVALAQAQEPWPGRPIKVIVPVTAGGTADVLAREFGRRLGERL CCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC GQPVVVENRPGANGIPATLAVARAPADGYTLLLTLTQHIQNPVQFKDAGYDPIADFTPLC CCCEEEECCCCCCCCCHHHHEEECCCCCEEHHHHHHHHHCCCCEECCCCCCCCCCCHHHH RIGAAATVLAARASLKVDSATELAQFAPGKGLTFGTTALGPQVILEVFNQSAKLEMLNVP HHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHHCCHHHHHHHHCCCCCEEEEECC YKGEAPALTDLLGGQIDMALLTVATARAHIQRGTLKGLAVIAPKRASSLPHVATFLEQGF CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHCCCHHHHHHHHHHH KEVNWTGGWYAFMAPAKLPPAIAARLVQELRVIGEDAAMRKLFDELNITVNWMDGPEFQP HHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCCCH VMKRDMELWRSLVQRSGVVIER HHHHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9583950; 12910271 [H]