| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609832
Identifier: 121609832
GI number: 121609832
Start: 3229018
End: 3229338
Strand: Direct
Name: 121609832
Synonym: Veis_2885
Alternate gene names: NA
Gene position: 3229018-3229338 (Clockwise)
Preceding gene: 121609831
Following gene: 121609846
Centisome position: 58.01
GC content: 59.81
Gene sequence:
>321_bases ATGCCGACGAAAGAAAGCAATATCGTCAAGCGAACCGTCGACCTGAAGAACCCGCCGCCTCTGACTGCCGGGCAGAAGGC GCGATTGGATGCCGTGGCGGCCATGCCTGATGCGCAGATCGACGACAGCGATGCCCCGTTTCTGCCGGATGCCGTCTGGA CGAAAGCCGCAGTGCAGTTGCCGCACACCAAGCGGCAAATCACGTTGCGTATCGATGCGGAAGTGCTGGATTTTTTCAAG CACACGGGCAAGCGGTATCAGTCCCGCATCAATGCCGTGCTGCGCTCCTACGTGCAAGCGCACAAGGCGCACGCGAAATG A
Upstream 100 bases:
>100_bases CGATGGGCCACGATCGGGTTTGCCCACTCGGCTGTCCTGTATGTGGTCTACACCGTTCGACGCGGGCAAACCATCCGCCT CATCTCTGCGAGGAAAGCCA
Downstream 100 bases:
>100_bases GCAGCAGGCCGGGCATTTCCGCGCCTGCCTGGCGCAAGCGGGCTGCCAAGTCCGGGGCCTGGTGCTCTGGTGTCGCGTCA CCGATCATCTGTCGGTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MPTKESNIVKRTVDLKNPPPLTAGQKARLDAVAAMPDAQIDDSDAPFLPDAVWTKAAVQLPHTKRQITLRIDAEVLDFFK HTGKRYQSRINAVLRSYVQAHKAHAK
Sequences:
>Translated_106_residues MPTKESNIVKRTVDLKNPPPLTAGQKARLDAVAAMPDAQIDDSDAPFLPDAVWTKAAVQLPHTKRQITLRIDAEVLDFFK HTGKRYQSRINAVLRSYVQAHKAHAK >Mature_105_residues PTKESNIVKRTVDLKNPPPLTAGQKARLDAVAAMPDAQIDDSDAPFLPDAVWTKAAVQLPHTKRQITLRIDAEVLDFFKH TGKRYQSRINAVLRSYVQAHKAHAK
Specific function: Unknown
COG id: COG3514
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11841; Mature: 11710
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTKESNIVKRTVDLKNPPPLTAGQKARLDAVAAMPDAQIDDSDAPFLPDAVWTKAAVQL CCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCC PHTKRQITLRIDAEVLDFFKHTGKRYQSRINAVLRSYVQAHKAHAK CCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PTKESNIVKRTVDLKNPPPLTAGQKARLDAVAAMPDAQIDDSDAPFLPDAVWTKAAVQL CCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCC PHTKRQITLRIDAEVLDFFKHTGKRYQSRINAVLRSYVQAHKAHAK CCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA