| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609831
Identifier: 121609831
GI number: 121609831
Start: 3228780
End: 3229127
Strand: Direct
Name: 121609831
Synonym: Veis_2884
Alternate gene names: NA
Gene position: 3228780-3229127 (Clockwise)
Preceding gene: 121609830
Following gene: 121609832
Centisome position: 58.0
GC content: 60.63
Gene sequence:
>348_bases GTGGAACTTGAATGGGATGCCGGCAAAGCGGCACGAAACCTGAACGAGCATGGCGTTTCCTTCGAGGATGCCGCGCTCGT TTTTTACGACCCCGGGCGGATCGAAGCCTGCGACGGACGCGAGGACTACGGGGAAGATCGATGGGCCACGATCGGGTTTG CCCACTCGGCTGTCCTGTATGTGGTCTACACCGTTCGACGCGGGCAAACCATCCGCCTCATCTCTGCGAGGAAAGCCAAT GCCGACGAAAGAAAGCAATATCGTCAAGCGAACCGTCGACCTGAAGAACCCGCCGCCTCTGACTGCCGGGCAGAAGGCGC GATTGGATGCCGTGGCGGCCATGCCTGA
Upstream 100 bases:
>100_bases CCGCGACGGCCACCCACCCGCCGTCGTGCGCGATAACCTACCAAGTATGCTCCGATGAAAACTTTACGTAACTACAAAAC GAAATGACGATGACGGCACA
Downstream 100 bases:
>100_bases TGCGCAGATCGACGACAGCGATGCCCCGTTTCTGCCGGATGCCGTCTGGACGAAAGCCGCAGTGCAGTTGCCGCACACCA AGCGGCAAATCACGTTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MELEWDAGKAARNLNEHGVSFEDAALVFYDPGRIEACDGREDYGEDRWATIGFAHSAVLYVVYTVRRGQTIRLISARKAN ADERKQYRQANRRPEEPAASDCRAEGAIGCRGGHA
Sequences:
>Translated_115_residues MELEWDAGKAARNLNEHGVSFEDAALVFYDPGRIEACDGREDYGEDRWATIGFAHSAVLYVVYTVRRGQTIRLISARKAN ADERKQYRQANRRPEEPAASDCRAEGAIGCRGGHA >Mature_115_residues MELEWDAGKAARNLNEHGVSFEDAALVFYDPGRIEACDGREDYGEDRWATIGFAHSAVLYVVYTVRRGQTIRLISARKAN ADERKQYRQANRRPEEPAASDCRAEGAIGCRGGHA
Specific function: Unknown
COG id: COG2929
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12829; Mature: 12829
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELEWDAGKAARNLNEHGVSFEDAALVFYDPGRIEACDGREDYGEDRWATIGFAHSAVLY CCCCCCCCHHHHCHHHCCCCCCCCEEEEECCCCEEECCCCCCCCCCCEEEEHHHHHEEEE VVYTVRRGQTIRLISARKANADERKQYRQANRRPEEPAASDCRAEGAIGCRGGHA HEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MELEWDAGKAARNLNEHGVSFEDAALVFYDPGRIEACDGREDYGEDRWATIGFAHSAVLY CCCCCCCCHHHHCHHHCCCCCCCCEEEEECCCCEEECCCCCCCCCCCEEEEHHHHHEEEE VVYTVRRGQTIRLISARKANADERKQYRQANRRPEEPAASDCRAEGAIGCRGGHA HEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA