Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121609831

Identifier: 121609831

GI number: 121609831

Start: 3228780

End: 3229127

Strand: Direct

Name: 121609831

Synonym: Veis_2884

Alternate gene names: NA

Gene position: 3228780-3229127 (Clockwise)

Preceding gene: 121609830

Following gene: 121609832

Centisome position: 58.0

GC content: 60.63

Gene sequence:

>348_bases
GTGGAACTTGAATGGGATGCCGGCAAAGCGGCACGAAACCTGAACGAGCATGGCGTTTCCTTCGAGGATGCCGCGCTCGT
TTTTTACGACCCCGGGCGGATCGAAGCCTGCGACGGACGCGAGGACTACGGGGAAGATCGATGGGCCACGATCGGGTTTG
CCCACTCGGCTGTCCTGTATGTGGTCTACACCGTTCGACGCGGGCAAACCATCCGCCTCATCTCTGCGAGGAAAGCCAAT
GCCGACGAAAGAAAGCAATATCGTCAAGCGAACCGTCGACCTGAAGAACCCGCCGCCTCTGACTGCCGGGCAGAAGGCGC
GATTGGATGCCGTGGCGGCCATGCCTGA

Upstream 100 bases:

>100_bases
CCGCGACGGCCACCCACCCGCCGTCGTGCGCGATAACCTACCAAGTATGCTCCGATGAAAACTTTACGTAACTACAAAAC
GAAATGACGATGACGGCACA

Downstream 100 bases:

>100_bases
TGCGCAGATCGACGACAGCGATGCCCCGTTTCTGCCGGATGCCGTCTGGACGAAAGCCGCAGTGCAGTTGCCGCACACCA
AGCGGCAAATCACGTTGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MELEWDAGKAARNLNEHGVSFEDAALVFYDPGRIEACDGREDYGEDRWATIGFAHSAVLYVVYTVRRGQTIRLISARKAN
ADERKQYRQANRRPEEPAASDCRAEGAIGCRGGHA

Sequences:

>Translated_115_residues
MELEWDAGKAARNLNEHGVSFEDAALVFYDPGRIEACDGREDYGEDRWATIGFAHSAVLYVVYTVRRGQTIRLISARKAN
ADERKQYRQANRRPEEPAASDCRAEGAIGCRGGHA
>Mature_115_residues
MELEWDAGKAARNLNEHGVSFEDAALVFYDPGRIEACDGREDYGEDRWATIGFAHSAVLYVVYTVRRGQTIRLISARKAN
ADERKQYRQANRRPEEPAASDCRAEGAIGCRGGHA

Specific function: Unknown

COG id: COG2929

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12829; Mature: 12829

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELEWDAGKAARNLNEHGVSFEDAALVFYDPGRIEACDGREDYGEDRWATIGFAHSAVLY
CCCCCCCCHHHHCHHHCCCCCCCCEEEEECCCCEEECCCCCCCCCCCEEEEHHHHHEEEE
VVYTVRRGQTIRLISARKANADERKQYRQANRRPEEPAASDCRAEGAIGCRGGHA
HEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MELEWDAGKAARNLNEHGVSFEDAALVFYDPGRIEACDGREDYGEDRWATIGFAHSAVLY
CCCCCCCCHHHHCHHHCCCCCCCCEEEEECCCCEEECCCCCCCCCCCEEEEHHHHHEEEE
VVYTVRRGQTIRLISARKANADERKQYRQANRRPEEPAASDCRAEGAIGCRGGHA
HEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA