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The map label for this gene is 121609783

Identifier: 121609783

GI number: 121609783

Start: 3185939

End: 3186220

Strand: Direct

Name: 121609783

Synonym: Veis_2834

Alternate gene names: NA

Gene position: 3185939-3186220 (Clockwise)

Preceding gene: 121609782

Following gene: 121609784

Centisome position: 57.23

GC content: 62.06

Gene sequence:

>282_bases
GTGTCGTTCAACCTGCCCGACGGGCGCGCTCTGTTCGATCATTTGAACCACACCTTCAGTGCCAGGGCCACCGGCATGGT
CGAGAGGTTCGATGGCCGCATAGCGGATGTCCTGAGGCCCCACAGGTGCAACAGCCGCGAGGACATGGAGCAGACCTTGC
CGCGCCATGTGGCCCTGTACAACCAACTTGCGCAGTCAGCGCTGGGCAGCAAGACACCTATGCAGGCCATGAAGGAGTGG
CACCAGGGGGCACCCGCATCCGTTTCACAAGCGGCCATATGA

Upstream 100 bases:

>100_bases
GAAGGCGAAGCGCAGACAGCACGAATGCACGGCAAGCGACGCCGGCAAAGCGCACGGATGATTCGGGAATGGAATTACTG
AATGACTTCGACGCGATCGA

Downstream 100 bases:

>100_bases
TCGTCCGGGATGCAACACCGACGCCGTGCCGATGGATTCCAGCGCCAGAGCACGCCAGAGCACGCCAGTGATTGGCACCG
ACGGGCACAGCGCCTGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Subunit; Integrase Catalytic Region; Integrase

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MSFNLPDGRALFDHLNHTFSARATGMVERFDGRIADVLRPHRCNSREDMEQTLPRHVALYNQLAQSALGSKTPMQAMKEW
HQGAPASVSQAAI

Sequences:

>Translated_93_residues
MSFNLPDGRALFDHLNHTFSARATGMVERFDGRIADVLRPHRCNSREDMEQTLPRHVALYNQLAQSALGSKTPMQAMKEW
HQGAPASVSQAAI
>Mature_92_residues
SFNLPDGRALFDHLNHTFSARATGMVERFDGRIADVLRPHRCNSREDMEQTLPRHVALYNQLAQSALGSKTPMQAMKEWH
QGAPASVSQAAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10390; Mature: 10259

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNLPDGRALFDHLNHTFSARATGMVERFDGRIADVLRPHRCNSREDMEQTLPRHVALY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHH
NQLAQSALGSKTPMQAMKEWHQGAPASVSQAAI
HHHHHHHCCCCCHHHHHHHHHCCCCCCCHHCCC
>Mature Secondary Structure 
SFNLPDGRALFDHLNHTFSARATGMVERFDGRIADVLRPHRCNSREDMEQTLPRHVALY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHH
NQLAQSALGSKTPMQAMKEWHQGAPASVSQAAI
HHHHHHHCCCCCHHHHHHHHHCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA