| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is pabB [H]
Identifier: 121609784
GI number: 121609784
Start: 3186392
End: 3188191
Strand: Direct
Name: pabB [H]
Synonym: Veis_2835
Alternate gene names: 121609784
Gene position: 3186392-3188191 (Clockwise)
Preceding gene: 121609783
Following gene: 121609787
Centisome position: 57.24
GC content: 71.94
Gene sequence:
>1800_bases TTGACGACTACCTCCCGCATCGACTTCACCCAGCCGCTGGACGGCCAGGCCGCGCGCCTGCGCCAAGCCTTTGGCAGGCC GCGCCAACTGTTGCTGGCCCACACCCATGCCGACGTGCGCGCGGTGCTCGACGCCGTGCATGCCGCAGCGCAGCGCGGCC ACTGGTGCGTGGGCTATCTGCGCTATGAGGCAGCGGCGGCGTTCGACACCGCCTTGCAAACCCACGCGGCCGATGGCCCG CTGGCCTGGTTTGCCGTGCACGACGCTCCCATGCCCTGGCCGGATGACAATCTGCAGCAGCGGGCGGCCGACCCGGCACG GGTGGAGTGGGCCGACGGCCCGGAGCGTGCCGCGTTTGACGCAGCGCTGGCCCGCATACAGCAGGCCATCAGCGCGGGCG AGCTGTACCAGGTCAATTACACCGCCCCGCTCAGGGGCCGCTTGCAGGGCGCCGCCGAGGCGCTGTTTGCCGCGCTGCAA CAGGCCCAGCCTGGCGGCTACGCGGCGCATATCGTTGCCGGGGATGAGCAGTTGCTGTCGGTGTCGCCCGAACTGTTCTT CGACTGGCACGATGCGCCCGGCGGCGGCCGCATCGTGGCCCGCCCGATGAAAGGCACGGCCCCGCGCGGCGCCACGCCCG GGCAGGACATGGCCAACGCCGAGTGGCTGCGCACGGCACCCAAGGAGCGGGCCGAGAACGTGATGATCGTCGACCTGCTG CGCAACGACATGGCGCGCATCGCCCTGCCGCACAGCGTGCGCGTGCCGGTGCTGTTTGCCACGCAGGCTCTGCCCACGGT GTGGCAGATGACCTCGGACGTGCAGGCGCGCACACGGCCGGGCACCACGCTGACCGATGTGTTTGCTGCGCTGTTTCCCT GCGGTTCGGTCACCGGCGCGCCCAAGGTGCGCGCGATGCAGATGATCCGCCAACTCGAGCCTGCCCCGCGCGGTGTGTAC TGCGGCGCCGTGGGCGTGGTGCGGCCTCGCGGCCCCGCCGGGGCCGATGGGCTGCGCGCCGTGGCCGCCACGTTCAACGT GCCGATACGCACCGTGGTGCTGCATACGCAGGGCGGCCAGCAGCGCGTCCACTGCGGCATCGGCAGCGGCATCACCTGCG GCGCGCAGGCCGATGCCGAGTGGCGCGAATGGCAGTACAAGCGCGCCTTCGTCGAGCGCGCCAGCATGCCGTTCGAACTG CTGGAAACCCTGGCCCTGGAGGACGCAGCGTTTCGCCATCTGCCCGAGCACCTGGCCCGCCTGCGCGGCGCTGCGGCGCA TTTCGGCGTGCCGTGGGATGCCGATGCCGTGCAGCAATGCCTGCGGGCGCTGGCGCAGCGCCACCTGGCGCAGCGCTGGC GTGTGCGCCTGCTGCTGGACGCTGCGGGCCGGCCCCGGGCCGAGGCCTTTGCCCTGCACGCCGCATCGGAGCCGGTGCGC CTGGCGCTGGCCACCCGGGCGTTCACGGCGGCGCACAGCGAGTTTGTGCGCTACAAGACGACGCGCCGCGCGCATTACGC GGCTTTTGCGCCGACTGCGCCGGGGGTGTTCGACACGCTGCTGTGGAACGAGGCCGGCGAGATCACTGAAAGCACCTTCG GCAACATCGCCGCATACATCGACGGCCGCTGGGTGACCCCGCCATGCTGCTGCGGCCTGCTGCCCGGCGTGGGCCGCGCC GTGGCGCTGCGCGAAGGGCGCGTGGCAGAGGCCGTGCTGCGCCTGACCGACAGGCCCCGGGTACAGGGCTGGGCGTTCAT CAACAGCCTGCGCGGGTGGCTGGCCGCCACGGTGCAGTAA
Upstream 100 bases:
>100_bases TTGGCACCGACGGGCACAGCGCCTGGCGTTGCCGGTCAAGCCCCGAATGATTTGTAATCGATAGCTGCACGCGCTGTCAG AACGAGCGCCAGGGCCTATC
Downstream 100 bases:
>100_bases AACACCCCCGGCAGGCAAGCCAGCGCCAAACCGCCGCCAGCCGCACAGCATATGGCTGGGCAGGGCAGCCGGCACCAAGC CCGCGCCCAGGCACCAAGCC
Product: para-aminobenzoate synthase subunit I
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 599; Mature: 598
Protein sequence:
>599_residues MTTTSRIDFTQPLDGQAARLRQAFGRPRQLLLAHTHADVRAVLDAVHAAAQRGHWCVGYLRYEAAAAFDTALQTHAADGP LAWFAVHDAPMPWPDDNLQQRAADPARVEWADGPERAAFDAALARIQQAISAGELYQVNYTAPLRGRLQGAAEALFAALQ QAQPGGYAAHIVAGDEQLLSVSPELFFDWHDAPGGGRIVARPMKGTAPRGATPGQDMANAEWLRTAPKERAENVMIVDLL RNDMARIALPHSVRVPVLFATQALPTVWQMTSDVQARTRPGTTLTDVFAALFPCGSVTGAPKVRAMQMIRQLEPAPRGVY CGAVGVVRPRGPAGADGLRAVAATFNVPIRTVVLHTQGGQQRVHCGIGSGITCGAQADAEWREWQYKRAFVERASMPFEL LETLALEDAAFRHLPEHLARLRGAAAHFGVPWDADAVQQCLRALAQRHLAQRWRVRLLLDAAGRPRAEAFALHAASEPVR LALATRAFTAAHSEFVRYKTTRRAHYAAFAPTAPGVFDTLLWNEAGEITESTFGNIAAYIDGRWVTPPCCCGLLPGVGRA VALREGRVAEAVLRLTDRPRVQGWAFINSLRGWLAATVQ
Sequences:
>Translated_599_residues MTTTSRIDFTQPLDGQAARLRQAFGRPRQLLLAHTHADVRAVLDAVHAAAQRGHWCVGYLRYEAAAAFDTALQTHAADGP LAWFAVHDAPMPWPDDNLQQRAADPARVEWADGPERAAFDAALARIQQAISAGELYQVNYTAPLRGRLQGAAEALFAALQ QAQPGGYAAHIVAGDEQLLSVSPELFFDWHDAPGGGRIVARPMKGTAPRGATPGQDMANAEWLRTAPKERAENVMIVDLL RNDMARIALPHSVRVPVLFATQALPTVWQMTSDVQARTRPGTTLTDVFAALFPCGSVTGAPKVRAMQMIRQLEPAPRGVY CGAVGVVRPRGPAGADGLRAVAATFNVPIRTVVLHTQGGQQRVHCGIGSGITCGAQADAEWREWQYKRAFVERASMPFEL LETLALEDAAFRHLPEHLARLRGAAAHFGVPWDADAVQQCLRALAQRHLAQRWRVRLLLDAAGRPRAEAFALHAASEPVR LALATRAFTAAHSEFVRYKTTRRAHYAAFAPTAPGVFDTLLWNEAGEITESTFGNIAAYIDGRWVTPPCCCGLLPGVGRA VALREGRVAEAVLRLTDRPRVQGWAFINSLRGWLAATVQ >Mature_598_residues TTTSRIDFTQPLDGQAARLRQAFGRPRQLLLAHTHADVRAVLDAVHAAAQRGHWCVGYLRYEAAAAFDTALQTHAADGPL AWFAVHDAPMPWPDDNLQQRAADPARVEWADGPERAAFDAALARIQQAISAGELYQVNYTAPLRGRLQGAAEALFAALQQ AQPGGYAAHIVAGDEQLLSVSPELFFDWHDAPGGGRIVARPMKGTAPRGATPGQDMANAEWLRTAPKERAENVMIVDLLR NDMARIALPHSVRVPVLFATQALPTVWQMTSDVQARTRPGTTLTDVFAALFPCGSVTGAPKVRAMQMIRQLEPAPRGVYC GAVGVVRPRGPAGADGLRAVAATFNVPIRTVVLHTQGGQQRVHCGIGSGITCGAQADAEWREWQYKRAFVERASMPFELL ETLALEDAAFRHLPEHLARLRGAAAHFGVPWDADAVQQCLRALAQRHLAQRWRVRLLLDAAGRPRAEAFALHAASEPVRL ALATRAFTAAHSEFVRYKTTRRAHYAAFAPTAPGVFDTLLWNEAGEITESTFGNIAAYIDGRWVTPPCCCGLLPGVGRAV ALREGRVAEAVLRLTDRPRVQGWAFINSLRGWLAATVQ
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=275, Percent_Identity=34.5454545454545, Blast_Score=160, Evalue=3e-40, Organism=Escherichia coli, GI1787518, Length=223, Percent_Identity=33.6322869955157, Blast_Score=93, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6320935, Length=266, Percent_Identity=31.9548872180451, Blast_Score=131, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6324361, Length=295, Percent_Identity=27.7966101694915, Blast_Score=90, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 65104; Mature: 64973
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTSRIDFTQPLDGQAARLRQAFGRPRQLLLAHTHADVRAVLDAVHAAAQRGHWCVGYL CCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEH RYEAAAAFDTALQTHAADGPLAWFAVHDAPMPWPDDNLQQRAADPARVEWADGPERAAFD HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHCCCCCEEEECCCCCHHHHH AALARIQQAISAGELYQVNYTAPLRGRLQGAAEALFAALQQAQPGGYAAHIVAGDEQLLS HHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHEE VSPELFFDWHDAPGGGRIVARPMKGTAPRGATPGQDMANAEWLRTAPKERAENVMIVDLL CCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCHHHHCCEEEEHHH RNDMARIALPHSVRVPVLFATQALPTVWQMTSDVQARTRPGTTLTDVFAALFPCGSVTGA HCCHHHEECCCCCCCCEEEEHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHCCCCCCCC PKVRAMQMIRQLEPAPRGVYCGAVGVVRPRGPAGADGLRAVAATFNVPIRTVVLHTQGGQ CHHHHHHHHHHCCCCCCCEEECCEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCC QRVHCGIGSGITCGAQADAEWREWQYKRAFVERASMPFELLETLALEDAAFRHLPEHLAR EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LRGAAAHFGVPWDADAVQQCLRALAQRHLAQRWRVRLLLDAAGRPRAEAFALHAASEPVR HHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHEEEECCCCCEE LALATRAFTAAHSEFVRYKTTRRAHYAAFAPTAPGVFDTLLWNEAGEITESTFGNIAAYI EHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCHHHHHHCCEEEEE DGRWVTPPCCCGLLPGVGRAVALREGRVAEAVLRLTDRPRVQGWAFINSLRGWLAATVQ CCCCCCCHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTTSRIDFTQPLDGQAARLRQAFGRPRQLLLAHTHADVRAVLDAVHAAAQRGHWCVGYL CCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEH RYEAAAAFDTALQTHAADGPLAWFAVHDAPMPWPDDNLQQRAADPARVEWADGPERAAFD HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHCCCCCEEEECCCCCHHHHH AALARIQQAISAGELYQVNYTAPLRGRLQGAAEALFAALQQAQPGGYAAHIVAGDEQLLS HHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHEE VSPELFFDWHDAPGGGRIVARPMKGTAPRGATPGQDMANAEWLRTAPKERAENVMIVDLL CCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCHHHHCCEEEEHHH RNDMARIALPHSVRVPVLFATQALPTVWQMTSDVQARTRPGTTLTDVFAALFPCGSVTGA HCCHHHEECCCCCCCCEEEEHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHCCCCCCCC PKVRAMQMIRQLEPAPRGVYCGAVGVVRPRGPAGADGLRAVAATFNVPIRTVVLHTQGGQ CHHHHHHHHHHCCCCCCCEEECCEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCC QRVHCGIGSGITCGAQADAEWREWQYKRAFVERASMPFELLETLALEDAAFRHLPEHLAR EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LRGAAAHFGVPWDADAVQQCLRALAQRHLAQRWRVRLLLDAAGRPRAEAFALHAASEPVR HHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHEEEECCCCCEE LALATRAFTAAHSEFVRYKTTRRAHYAAFAPTAPGVFDTLLWNEAGEITESTFGNIAAYI EHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCHHHHHHCCEEEEE DGRWVTPPCCCGLLPGVGRAVALREGRVAEAVLRLTDRPRVQGWAFINSLRGWLAATVQ CCCCCCCHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3057324; 11677609; 2251281 [H]