| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609569
Identifier: 121609569
GI number: 121609569
Start: 2954817
End: 2955044
Strand: Direct
Name: 121609569
Synonym: Veis_2614
Alternate gene names: NA
Gene position: 2954817-2955044 (Clockwise)
Preceding gene: 121609560
Following gene: 121609570
Centisome position: 53.08
GC content: 59.21
Gene sequence:
>228_bases ATGGGCAAGCAAATGAGCGATCAACCGGACGAAATCCTCACGATTGATGAGGTGGCCGCCTATTTGAAGGCTAGCAAGCG TACGGTCTATCGCCTCGCGGCGAGCGGGAAGCTCCCAGCCTTCAAACTCGGCGGAACGTGGCGCTTCCGGCGTGGCGAAC TGGATCAGTGGATCGCCAGCCACATCGGCAAGGCATCGGTCGATGACAACGAGGGAGGAACGGAATGA
Upstream 100 bases:
>100_bases GTCGGTCCGGCAACTTTTCAGATGCCAAGTTTGCCCAAGTCTGCTCAACCGCGAAATCTTATGCCAAGATACGCCATTAG ACCATCCGTGTCGAAACGAC
Downstream 100 bases:
>100_bases CCAGCGCCGCCGCCCTCCAATCCAAGGACAATCCGCAGCAGCTCGACGCCATCCTCACCACAGAAGGCCCGGTGCTCATC ATCGCGGGCCCGGCTCCGGT
Product: phage transcriptional regulator AlpA
Products: NA
Alternate protein names: Transcriptional Regulator; Phage Transcriptional Regulator; Excision Promoter Xis; Transcriptional Regulator AlpA Family; Excisionase
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MGKQMSDQPDEILTIDEVAAYLKASKRTVYRLAASGKLPAFKLGGTWRFRRGELDQWIASHIGKASVDDNEGGTE
Sequences:
>Translated_75_residues MGKQMSDQPDEILTIDEVAAYLKASKRTVYRLAASGKLPAFKLGGTWRFRRGELDQWIASHIGKASVDDNEGGTE >Mature_74_residues GKQMSDQPDEILTIDEVAAYLKASKRTVYRLAASGKLPAFKLGGTWRFRRGELDQWIASHIGKASVDDNEGGTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8283; Mature: 8152
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKQMSDQPDEILTIDEVAAYLKASKRTVYRLAASGKLPAFKLGGTWRFRRGELDQWIAS CCCCCCCCCCCEEEHHHHHHHHHHHHHHEEHHCCCCCCCEEEECCEEEECCCCHHHHHHH HIGKASVDDNEGGTE HCCCCCCCCCCCCCC >Mature Secondary Structure GKQMSDQPDEILTIDEVAAYLKASKRTVYRLAASGKLPAFKLGGTWRFRRGELDQWIAS CCCCCCCCCCEEEHHHHHHHHHHHHHHEEHHCCCCCCCEEEECCEEEECCCCHHHHHHH HIGKASVDDNEGGTE HCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA