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The map label for this gene is flhF [H]

Identifier: 120613050

GI number: 120613050

Start: 4908844

End: 4910418

Strand: Direct

Name: flhF [H]

Synonym: Aave_4414

Alternate gene names: 120613050

Gene position: 4908844-4910418 (Clockwise)

Preceding gene: 120613049

Following gene: 120613051

Centisome position: 91.71

GC content: 70.98

Gene sequence:

>1575_bases
ATGAATATCAAACGCTTTACCGCTCCCACCTCCCGTGAGGCCCTGGCCAAGGCACGCATGGCCTTCGGAGACGGCACGCT
GATCCTCTCGAACCGCCAGATCGCCGGCGGCGTCGAGGTGATGGCCACCGCGGAAGACACGCTGTCCTCGCTGGAGAGCG
CCGCCGCCGAGCCCGCACCCGTCGCCTCGAGGCTGCAGGAACGCGCCCCGGCCGCCTCCCGGCTGCAGGAGCGCGCCGCC
GACATGGCCGCCAACCCGGCGCAGTCGAGCCGGCCTCTGCGCGCGGCGCAGCGGTCCGAGGCGCGCAACCCGGTGGCGCA
GGACACGGAGCAACTGGCGATGAGCACGCTCTCCTTCCAGGACTATGTGCGCGAGCGCATGCTGCGCCGCCGCCACGAGG
CCATGCACGGCACGGCACCGGCCTCCGATGCCGCGCCGCAGCCCGAGCGCGCGCCGCTGTCGCGCCCCGAAGCCCCCCGC
ATGGCCGAACGTGCCATGGCGCCCGCCAGCGCCCCGCTGCCGCGGCACAACCCGATGCACGCCATCCCCCTGGGCCTGCC
GCCCGAGCAGCCCGTGCGCGAACGCCGCGTGCAGGCCCCCGTGCCCTCGCTCGCCCAGGAGTCGGGCCAGCAGAACCTGA
TGAGCGAACTGCAGTCCATGAAGGACCTCATCGAGGACCGCTTCAACACGCTGGCCTGGCTGGGTCAGGCCCGGCAGAAC
CCGATCCAGTCCAACCTGATGCTCAAGCTCATCCGGGCGGGCTATTCACCCTCGCTGGCGCGCGCCGTGCTGGAGCGCCT
GCCCGAGGAGCTGGGTGCCGCCCATGCCGTGCGCTGGCTCATGGAAGTGCTGGAACGCAACCTCAGGACCGATGCGCACC
AGCGCCCGCTGTACGAAGAAGGCGGCGTGTACGCGATGGTGGGCGCCACCGGCGTGGGCAAGACGACCACGACCGCCAAG
CTCGCCGCCCTGTGCGCCCGCATCCACGGCCCGGCCAGCGTCGGCCTGATCACCCTGGACACCTACCGCGTGGGCGCCCA
CGAGCAGTTGCGCTCGTATGGCCGCATGCTCGGCGTGGTGGCGCACCTCGCCCACGACCGTGCCGCCCTGCAGGACCTGC
TCGGCCTGCTGGCCGGCAAGAAGATGGTGCTGATCGACACCACCGGCATCGCCCCGCGCGATCCGCGCAAGCGCGACATG
CTCGACGTGCTCGACCTGCCCGGCGTGAACCGCCTGCTGGTGCTCAACGCGGGCTGCCATGGCGATACGCTGGACGACGT
GCTCATCGGGTTCCGGACCGCCGGCTCGCAGCAGGCCATCCTCTCCAAGGTGGACGAGGCCGTGAAGCTCGGCCCGGCCG
TGGATGCGCTGATCCGCCACCAGATGGTGCTGCGCGGCGTGACCAACGGCCAGCGCGTGCCCGAGGACTGGGAAGCGGCC
GATGCCCAGAAGCTCATCGCCACCTCCATGCGTTCGCCCGCGAAGTCGGCGTTCGACCCGAAAGCCTCGGATCTGAACTT
CTTCTTCTCGCACTCCCCCGAACTCGCCACGGAAAGGGCCCTGGTCGATGCTTGA

Upstream 100 bases:

>100_bases
GCCTCGTGCGCCGGGTCGCCCCGCGCCTGCAGGTGCTCGCCCACAGCGAGATCCCTGAAACCCACACCATCCGCATTGGC
CCGATCCTCAAAGGTGCAGC

Downstream 100 bases:

>100_bases
CACTGCCTTCCACCAGGGCGCGAGCCTGCTGCGCCTGATGCCCGAGTCGCCCCTGCGCCTGCTGGCCATCCTGGCGCAGC
CGGATGCGGCCTACGGGCTC

Product: GTP-binding signal recognition particle

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MNIKRFTAPTSREALAKARMAFGDGTLILSNRQIAGGVEVMATAEDTLSSLESAAAEPAPVASRLQERAPAASRLQERAA
DMAANPAQSSRPLRAAQRSEARNPVAQDTEQLAMSTLSFQDYVRERMLRRRHEAMHGTAPASDAAPQPERAPLSRPEAPR
MAERAMAPASAPLPRHNPMHAIPLGLPPEQPVRERRVQAPVPSLAQESGQQNLMSELQSMKDLIEDRFNTLAWLGQARQN
PIQSNLMLKLIRAGYSPSLARAVLERLPEELGAAHAVRWLMEVLERNLRTDAHQRPLYEEGGVYAMVGATGVGKTTTTAK
LAALCARIHGPASVGLITLDTYRVGAHEQLRSYGRMLGVVAHLAHDRAALQDLLGLLAGKKMVLIDTTGIAPRDPRKRDM
LDVLDLPGVNRLLVLNAGCHGDTLDDVLIGFRTAGSQQAILSKVDEAVKLGPAVDALIRHQMVLRGVTNGQRVPEDWEAA
DAQKLIATSMRSPAKSAFDPKASDLNFFFSHSPELATERALVDA

Sequences:

>Translated_524_residues
MNIKRFTAPTSREALAKARMAFGDGTLILSNRQIAGGVEVMATAEDTLSSLESAAAEPAPVASRLQERAPAASRLQERAA
DMAANPAQSSRPLRAAQRSEARNPVAQDTEQLAMSTLSFQDYVRERMLRRRHEAMHGTAPASDAAPQPERAPLSRPEAPR
MAERAMAPASAPLPRHNPMHAIPLGLPPEQPVRERRVQAPVPSLAQESGQQNLMSELQSMKDLIEDRFNTLAWLGQARQN
PIQSNLMLKLIRAGYSPSLARAVLERLPEELGAAHAVRWLMEVLERNLRTDAHQRPLYEEGGVYAMVGATGVGKTTTTAK
LAALCARIHGPASVGLITLDTYRVGAHEQLRSYGRMLGVVAHLAHDRAALQDLLGLLAGKKMVLIDTTGIAPRDPRKRDM
LDVLDLPGVNRLLVLNAGCHGDTLDDVLIGFRTAGSQQAILSKVDEAVKLGPAVDALIRHQMVLRGVTNGQRVPEDWEAA
DAQKLIATSMRSPAKSAFDPKASDLNFFFSHSPELATERALVDA
>Mature_524_residues
MNIKRFTAPTSREALAKARMAFGDGTLILSNRQIAGGVEVMATAEDTLSSLESAAAEPAPVASRLQERAPAASRLQERAA
DMAANPAQSSRPLRAAQRSEARNPVAQDTEQLAMSTLSFQDYVRERMLRRRHEAMHGTAPASDAAPQPERAPLSRPEAPR
MAERAMAPASAPLPRHNPMHAIPLGLPPEQPVRERRVQAPVPSLAQESGQQNLMSELQSMKDLIEDRFNTLAWLGQARQN
PIQSNLMLKLIRAGYSPSLARAVLERLPEELGAAHAVRWLMEVLERNLRTDAHQRPLYEEGGVYAMVGATGVGKTTTTAK
LAALCARIHGPASVGLITLDTYRVGAHEQLRSYGRMLGVVAHLAHDRAALQDLLGLLAGKKMVLIDTTGIAPRDPRKRDM
LDVLDLPGVNRLLVLNAGCHGDTLDDVLIGFRTAGSQQAILSKVDEAVKLGPAVDALIRHQMVLRGVTNGQRVPEDWEAA
DAQKLIATSMRSPAKSAFDPKASDLNFFFSHSPELATERALVDA

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 56848; Mature: 56848

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKRFTAPTSREALAKARMAFGDGTLILSNRQIAGGVEVMATAEDTLSSLESAAAEPAP
CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHCCCCCH
VASRLQERAPAASRLQERAADMAANPAQSSRPLRAAQRSEARNPVAQDTEQLAMSTLSFQ
HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
DYVRERMLRRRHEAMHGTAPASDAAPQPERAPLSRPEAPRMAERAMAPASAPLPRHNPMH
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
AIPLGLPPEQPVRERRVQAPVPSLAQESGQQNLMSELQSMKDLIEDRFNTLAWLGQARQN
EECCCCCCCCCHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PIQSNLMLKLIRAGYSPSLARAVLERLPEELGAAHAVRWLMEVLERNLRTDAHQRPLYEE
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHC
GGVYAMVGATGVGKTTTTAKLAALCARIHGPASVGLITLDTYRVGAHEQLRSYGRMLGVV
CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECEECCHHHHHHHHHHHHHHH
AHLAHDRAALQDLLGLLAGKKMVLIDTTGIAPRDPRKRDMLDVLDLPGVNRLLVLNAGCH
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCC
GDTLDDVLIGFRTAGSQQAILSKVDEAVKLGPAVDALIRHQMVLRGVTNGQRVPEDWEAA
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
DAQKLIATSMRSPAKSAFDPKASDLNFFFSHSPELATERALVDA
HHHHHHHHHHCCCHHHHCCCCCCCCCEEECCCCCHHHHHHHCCC
>Mature Secondary Structure
MNIKRFTAPTSREALAKARMAFGDGTLILSNRQIAGGVEVMATAEDTLSSLESAAAEPAP
CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHCCCCCH
VASRLQERAPAASRLQERAADMAANPAQSSRPLRAAQRSEARNPVAQDTEQLAMSTLSFQ
HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
DYVRERMLRRRHEAMHGTAPASDAAPQPERAPLSRPEAPRMAERAMAPASAPLPRHNPMH
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
AIPLGLPPEQPVRERRVQAPVPSLAQESGQQNLMSELQSMKDLIEDRFNTLAWLGQARQN
EECCCCCCCCCHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PIQSNLMLKLIRAGYSPSLARAVLERLPEELGAAHAVRWLMEVLERNLRTDAHQRPLYEE
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHC
GGVYAMVGATGVGKTTTTAKLAALCARIHGPASVGLITLDTYRVGAHEQLRSYGRMLGVV
CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECEECCHHHHHHHHHHHHHHH
AHLAHDRAALQDLLGLLAGKKMVLIDTTGIAPRDPRKRDMLDVLDLPGVNRLLVLNAGCH
HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCC
GDTLDDVLIGFRTAGSQQAILSKVDEAVKLGPAVDALIRHQMVLRGVTNGQRVPEDWEAA
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
DAQKLIATSMRSPAKSAFDPKASDLNFFFSHSPELATERALVDA
HHHHHHHHHHCCCHHHHCCCCCCCCCEEECCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]