| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120613051
Identifier: 120613051
GI number: 120613051
Start: 4910411
End: 4911208
Strand: Direct
Name: 120613051
Synonym: Aave_4415
Alternate gene names: NA
Gene position: 4910411-4911208 (Clockwise)
Preceding gene: 120613050
Following gene: 120613052
Centisome position: 91.74
GC content: 73.81
Gene sequence:
>798_bases ATGCTTGACACTGCCTTCCACCAGGGCGCGAGCCTGCTGCGCCTGATGCCCGAGTCGCCCCTGCGCCTGCTGGCCATCCT GGCGCAGCCGGATGCGGCCTACGGGCTCGAAACCTTCTTCCAGGTGTGCTCGGCGCTGCAGCGCATGGGCTATCCCGTGG CCGTTCTCGACGGCACCGCGCGCGAGACCGATGCCTTCCCCGGCCTGGCCCACCTGCTGGCCGAGCCGTCCTGGCAGGAC GGCGCGCCGCTGGACACGGGAGGCGCCGCCGCGGCCTCTCTGGCCGTGCTGCCGGCCGCCTACGGACTGCGCCGGCTGGC CCGCCAGAGCACCGATGCGGTGGCGGCCCAGCAGACCCTGCAGCCCTTCTTCCGCTCCTACGCGGTGCTGGCGATCTATG CCCCCGCGGAGGCGCTGGCGCCCCTGGTGCGCGATACGGCCGCGGTGCCGCTGCTGATCGCCGAGGGCGGCGACCATGCG ATGCGCAGCTACCGCCAGCTCAAGCACATGGCGCTGCACGCCGGCGTGCCCTGCACGGTGGCCTCGGTGCTGCCCACCGA CCGGCCCGCGGGCCTCCACCGGGTCCACGCCACGCTCGCCACCCTGCAGCGCTGCGCCGAGCGGCACCTGGGCAGCGAAT TGCGCACCACGACCCTGCGGGCCAATCACCCGCAGGACTTGCAGCGCCTGGCCTTGCAACTGCTGGAAAACGCGGGCACC ATTGGCGCCGCGCCGGCCGCAGCCGCCCCGCCCTTCGGTACGCAGCGGTCCGCCCAGCCCTTCGCACGGAGCCACTGA
Upstream 100 bases:
>100_bases ATGCGTTCGCCCGCGAAGTCGGCGTTCGACCCGAAAGCCTCGGATCTGAACTTCTTCTTCTCGCACTCCCCCGAACTCGC CACGGAAAGGGCCCTGGTCG
Downstream 100 bases:
>100_bases TCCGATGTACACCGCCAAAGGACAGCTCAACCGCGATGCATTGATCCGCCAGCACGCGCCGCTGGTCCGCCGGATCGCGC ACCACATGATCGCGAAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MLDTAFHQGASLLRLMPESPLRLLAILAQPDAAYGLETFFQVCSALQRMGYPVAVLDGTARETDAFPGLAHLLAEPSWQD GAPLDTGGAAAASLAVLPAAYGLRRLARQSTDAVAAQQTLQPFFRSYAVLAIYAPAEALAPLVRDTAAVPLLIAEGGDHA MRSYRQLKHMALHAGVPCTVASVLPTDRPAGLHRVHATLATLQRCAERHLGSELRTTTLRANHPQDLQRLALQLLENAGT IGAAPAAAAPPFGTQRSAQPFARSH
Sequences:
>Translated_265_residues MLDTAFHQGASLLRLMPESPLRLLAILAQPDAAYGLETFFQVCSALQRMGYPVAVLDGTARETDAFPGLAHLLAEPSWQD GAPLDTGGAAAASLAVLPAAYGLRRLARQSTDAVAAQQTLQPFFRSYAVLAIYAPAEALAPLVRDTAAVPLLIAEGGDHA MRSYRQLKHMALHAGVPCTVASVLPTDRPAGLHRVHATLATLQRCAERHLGSELRTTTLRANHPQDLQRLALQLLENAGT IGAAPAAAAPPFGTQRSAQPFARSH >Mature_265_residues MLDTAFHQGASLLRLMPESPLRLLAILAQPDAAYGLETFFQVCSALQRMGYPVAVLDGTARETDAFPGLAHLLAEPSWQD GAPLDTGGAAAASLAVLPAAYGLRRLARQSTDAVAAQQTLQPFFRSYAVLAIYAPAEALAPLVRDTAAVPLLIAEGGDHA MRSYRQLKHMALHAGVPCTVASVLPTDRPAGLHRVHATLATLQRCAERHLGSELRTTTLRANHPQDLQRLALQLLENAGT IGAAPAAAAPPFGTQRSAQPFARSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28084; Mature: 28084
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDTAFHQGASLLRLMPESPLRLLAILAQPDAAYGLETFFQVCSALQRMGYPVAVLDGTA CCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCC RETDAFPGLAHLLAEPSWQDGAPLDTGGAAAASLAVLPAAYGLRRLARQSTDAVAAQQTL HHCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QPFFRSYAVLAIYAPAEALAPLVRDTAAVPLLIAEGGDHAMRSYRQLKHMALHAGVPCTV HHHHHHHHHHEEECCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHH ASVLPTDRPAGLHRVHATLATLQRCAERHLGSELRTTTLRANHPQDLQRLALQLLENAGT HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHCCCC IGAAPAAAAPPFGTQRSAQPFARSH CCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLDTAFHQGASLLRLMPESPLRLLAILAQPDAAYGLETFFQVCSALQRMGYPVAVLDGTA CCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCC RETDAFPGLAHLLAEPSWQDGAPLDTGGAAAASLAVLPAAYGLRRLARQSTDAVAAQQTL HHCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QPFFRSYAVLAIYAPAEALAPLVRDTAAVPLLIAEGGDHAMRSYRQLKHMALHAGVPCTV HHHHHHHHHHEEECCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCHHH ASVLPTDRPAGLHRVHATLATLQRCAERHLGSELRTTTLRANHPQDLQRLALQLLENAGT HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHCCCC IGAAPAAAAPPFGTQRSAQPFARSH CCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA