| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is ate
Identifier: 120611765
GI number: 120611765
Start: 3429085
End: 3429822
Strand: Direct
Name: ate
Synonym: Aave_3105
Alternate gene names: 120611765
Gene position: 3429085-3429822 (Clockwise)
Preceding gene: 120611764
Following gene: 120611766
Centisome position: 64.06
GC content: 66.94
Gene sequence:
>738_bases ATGACGCAACTCAACGACCTTCCGCTGCAGACCCTGCAGTTCTACGCGACGGCCCCCTACCCGTGCAGCTACCTGCCGGA CCGGCAGGCCCGGTCCCAGGTCGCCACGCCCAGCCACCTGATCCAGAGCGACGTGTATTCCGACCTGGTGGCGCGCGGAT TCCGCCGCAGCGGCATGTTCACCTACCGCCCCTATTGCGACGGCTGCCAGGCCTGCACCCCGCTGCGCGTACTGGCGGGC GAGTTCCGGCCCGACCGCAGCCAGCGCCGGGCCTGGAAACAGCACAGCATCCTGCAGACCCGCGTGCTGCGACTGTGCTA CGAGCCGGAGCACTACCAGCTCTATCTCCACTACCAGCGCGCCCGCCATTCCGGCGGCGGCATGGACCACGACAGCATCG ACCAGTACACGCAGTTCCTGCTGCAGAGCCGGGTGAATTCGCGCCTCGTCGAATTCCGCGATCCGGCGCCCGACGGCGAA ACCGGCACGCTGCGCATGGTGTCCATCCTCGACGTGCTGGACGACGGCCTTTCGGCCGTCTATACCTTCTACGACCCCGA TCCGGACTGCAGCTACGGCACCTTCAACGTGCTCTGGCAGATCGAGCAGGCCCGCACGCTCGGCCTGGCACACGTCTATC TGGGCTACTGGATCGCCGAGAGCGCCAAGATGAACTACAAGTCGCGCTTCCACCCGCACGAACTGCGGGTGCACGGCGAG TGGCAGCGCGGCACCTGA
Upstream 100 bases:
>100_bases TCCTGCGCAACGTGCAAGCCGCCACCGCCCTGGCACCGATCACCTGGCGCTTCGAATCCTTATACTGGGACGCATTGCTG CCCCCTTCGCCCGGCCCGCA
Downstream 100 bases:
>100_bases GCTTCCGCGCCGCGGCTGAATTTCATAGGATAAAATTCCCGGACATTGCCTTGGCCGAGAACCATGAAAAAAGACGACGC AGGCGCCTCCTCCAAACCCA
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MTQLNDLPLQTLQFYATAPYPCSYLPDRQARSQVATPSHLIQSDVYSDLVARGFRRSGMFTYRPYCDGCQACTPLRVLAG EFRPDRSQRRAWKQHSILQTRVLRLCYEPEHYQLYLHYQRARHSGGGMDHDSIDQYTQFLLQSRVNSRLVEFRDPAPDGE TGTLRMVSILDVLDDGLSAVYTFYDPDPDCSYGTFNVLWQIEQARTLGLAHVYLGYWIAESAKMNYKSRFHPHELRVHGE WQRGT
Sequences:
>Translated_245_residues MTQLNDLPLQTLQFYATAPYPCSYLPDRQARSQVATPSHLIQSDVYSDLVARGFRRSGMFTYRPYCDGCQACTPLRVLAG EFRPDRSQRRAWKQHSILQTRVLRLCYEPEHYQLYLHYQRARHSGGGMDHDSIDQYTQFLLQSRVNSRLVEFRDPAPDGE TGTLRMVSILDVLDDGLSAVYTFYDPDPDCSYGTFNVLWQIEQARTLGLAHVYLGYWIAESAKMNYKSRFHPHELRVHGE WQRGT >Mature_244_residues TQLNDLPLQTLQFYATAPYPCSYLPDRQARSQVATPSHLIQSDVYSDLVARGFRRSGMFTYRPYCDGCQACTPLRVLAGE FRPDRSQRRAWKQHSILQTRVLRLCYEPEHYQLYLHYQRARHSGGGMDHDSIDQYTQFLLQSRVNSRLVEFRDPAPDGET GTLRMVSILDVLDDGLSAVYTFYDPDPDCSYGTFNVLWQIEQARTLGLAHVYLGYWIAESAKMNYKSRFHPHELRVHGEW QRGT
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential)
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATE_ACIAC (A1TRT1)
Other databases:
- EMBL: CP000512 - RefSeq: YP_971443.1 - STRING: A1TRT1 - GeneID: 4665117 - GenomeReviews: CP000512_GR - KEGG: aav:Aave_3105 - NMPDR: fig|397945.5.peg.2645 - eggNOG: COG2935 - HOGENOM: HBG651116 - OMA: PQFYLTA - ProtClustDB: PRK01305 - BioCyc: AAVE397945:AAVE_3105-MONOMER - GO: GO:0005737 - GO: GO:0006412 - HAMAP: MF_00689 - InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 - PIRSF: PIRSF037208
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.8
Molecular weight: Translated: 28453; Mature: 28322
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQLNDLPLQTLQFYATAPYPCSYLPDRQARSQVATPSHLIQSDVYSDLVARGFRRSGMF CCCCCCCCHHHHHHEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCE TYRPYCDGCQACTPLRVLAGEFRPDRSQRRAWKQHSILQTRVLRLCYEPEHYQLYLHYQR EECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEH ARHSGGGMDHDSIDQYTQFLLQSRVNSRLVEFRDPAPDGETGTLRMVSILDVLDDGLSAV HHCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHCCHHEE YTFYDPDPDCSYGTFNVLWQIEQARTLGLAHVYLGYWIAESAKMNYKSRFHPHELRVHGE EEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECC WQRGT CCCCC >Mature Secondary Structure TQLNDLPLQTLQFYATAPYPCSYLPDRQARSQVATPSHLIQSDVYSDLVARGFRRSGMF CCCCCCCHHHHHHEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCE TYRPYCDGCQACTPLRVLAGEFRPDRSQRRAWKQHSILQTRVLRLCYEPEHYQLYLHYQR EECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEH ARHSGGGMDHDSIDQYTQFLLQSRVNSRLVEFRDPAPDGETGTLRMVSILDVLDDGLSAV HHCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHCCHHEE YTFYDPDPDCSYGTFNVLWQIEQARTLGLAHVYLGYWIAESAKMNYKSRFHPHELRVHGE EEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEECC WQRGT CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA