| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is aat [H]
Identifier: 120611764
GI number: 120611764
Start: 3428327
End: 3429088
Strand: Direct
Name: aat [H]
Synonym: Aave_3104
Alternate gene names: 120611764
Gene position: 3428327-3429088 (Clockwise)
Preceding gene: 120611763
Following gene: 120611765
Centisome position: 64.05
GC content: 71.92
Gene sequence:
>762_bases ATGCCCTCGCCCGCCCCGCTCGCCTGGCTCGAACCCGACGACCCCTTCCCGCCCGCCGAACACGCATGGGGGCCGGAGGA TCCTGCCCCCGGCCTGCTCGCGGCCGGCGGGGCGCTCGATACGGCGCACCTGCGCCAGGCCTATGCCCAGGGCATCTTCC CGTGGTTCAGCGCGGGGCAGCCCATCCTCTGGTGGAGCCCGGACCCGCGCATGGTCCTCGCGGTGGAATCGTTCCGCCTG CACCGGTCGCTGCGGCGCACCCTGCAGCGCTTCCGCACGTCTCCCGGCTGCGAGATCCGCGTGGACCACAGCTTCCCGGA CGTGATCCGCGCCTGCGCGCAAACGCCGCGCGGCGGCCAGCACGGCACCTGGATCGTGCCGGACATGATCGCCGCCTACG AGGAGTTCCACCGCGCGGGCCATGCCCACAGCATCGAGACCTGGCAGGACGGCCGGCTGGTGGGCGGCCTCTACTGCATC GGCATCGGCCGGGCGGTCTTCGGCGAGTCCATGTTCGCCCATGCCACCGATGCCTCCAAGATCGCCCTGGCGGCGCTCGT CTGCCTGTGCCGCCGCCACGGGGCGGAATGGATCGACTGCCAGCAGAACACCGCCCACCTCGCCTCGCTGGGCGCCCGGG AAATCCCGCGCGAGCGCTTCCTGCGCAACGTGCAAGCCGCCACCGCCCTGGCACCGATCACCTGGCGCTTCGAATCCTTA TACTGGGACGCATTGCTGCCCCCTTCGCCCGGCCCGCAATGA
Upstream 100 bases:
>100_bases TTTCCGTGCCAACGGCCTCCCCGGCATCGGCAGTACGCGGCGCGACCTGGCGCTGGAGCGCACAATGGCACTCCAGCATC CCGCCGCCCATCTGCACGCC
Downstream 100 bases:
>100_bases CGCAACTCAACGACCTTCCGCTGCAGACCCTGCAGTTCTACGCGACGGCCCCCTACCCGTGCAGCTACCTGCCGGACCGG CAGGCCCGGTCCCAGGTCGC
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase [H]
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MPSPAPLAWLEPDDPFPPAEHAWGPEDPAPGLLAAGGALDTAHLRQAYAQGIFPWFSAGQPILWWSPDPRMVLAVESFRL HRSLRRTLQRFRTSPGCEIRVDHSFPDVIRACAQTPRGGQHGTWIVPDMIAAYEEFHRAGHAHSIETWQDGRLVGGLYCI GIGRAVFGESMFAHATDASKIALAALVCLCRRHGAEWIDCQQNTAHLASLGAREIPRERFLRNVQAATALAPITWRFESL YWDALLPPSPGPQ
Sequences:
>Translated_253_residues MPSPAPLAWLEPDDPFPPAEHAWGPEDPAPGLLAAGGALDTAHLRQAYAQGIFPWFSAGQPILWWSPDPRMVLAVESFRL HRSLRRTLQRFRTSPGCEIRVDHSFPDVIRACAQTPRGGQHGTWIVPDMIAAYEEFHRAGHAHSIETWQDGRLVGGLYCI GIGRAVFGESMFAHATDASKIALAALVCLCRRHGAEWIDCQQNTAHLASLGAREIPRERFLRNVQAATALAPITWRFESL YWDALLPPSPGPQ >Mature_252_residues PSPAPLAWLEPDDPFPPAEHAWGPEDPAPGLLAAGGALDTAHLRQAYAQGIFPWFSAGQPILWWSPDPRMVLAVESFRLH RSLRRTLQRFRTSPGCEIRVDHSFPDVIRACAQTPRGGQHGTWIVPDMIAAYEEFHRAGHAHSIETWQDGRLVGGLYCIG IGRAVFGESMFAHATDASKIALAALVCLCRRHGAEWIDCQQNTAHLASLGAREIPRERFLRNVQAATALAPITWRFESLY WDALLPPSPGPQ
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine [H]
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family [H]
Homologues:
Organism=Escherichia coli, GI1787111, Length=195, Percent_Identity=47.1794871794872, Blast_Score=165, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR004616 [H]
Pfam domain/function: PF03588 Leu_Phe_trans [H]
EC number: =2.3.2.6 [H]
Molecular weight: Translated: 27978; Mature: 27847
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPAPLAWLEPDDPFPPAEHAWGPEDPAPGLLAAGGALDTAHLRQAYAQGIFPWFSAGQ CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCHHHCCCC PILWWSPDPRMVLAVESFRLHRSLRRTLQRFRTSPGCEIRVDHSFPDVIRACAQTPRGGQ CEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCC HGTWIVPDMIAAYEEFHRAGHAHSIETWQDGRLVGGLYCIGIGRAVFGESMFAHATDASK CCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHEEHHHHHHHHHHHHHHCCCHHH IALAALVCLCRRHGAEWIDCQQNTAHLASLGAREIPRERFLRNVQAATALAPITWRFESL HHHHHHHHHHHHCCCCEEECCCCHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHH YWDALLPPSPGPQ EECCCCCCCCCCC >Mature Secondary Structure PSPAPLAWLEPDDPFPPAEHAWGPEDPAPGLLAAGGALDTAHLRQAYAQGIFPWFSAGQ CCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCHHHCCCC PILWWSPDPRMVLAVESFRLHRSLRRTLQRFRTSPGCEIRVDHSFPDVIRACAQTPRGGQ CEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCC HGTWIVPDMIAAYEEFHRAGHAHSIETWQDGRLVGGLYCIGIGRAVFGESMFAHATDASK CCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHEEHHHHHHHHHHHHHHCCCHHH IALAALVCLCRRHGAEWIDCQQNTAHLASLGAREIPRERFLRNVQAATALAPITWRFESL HHHHHHHHHHHHCCCCEEECCCCHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHH YWDALLPPSPGPQ EECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA