| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611672
Identifier: 120611672
GI number: 120611672
Start: 3318744
End: 3320258
Strand: Reverse
Name: 120611672
Synonym: Aave_3009
Alternate gene names: NA
Gene position: 3320258-3318744 (Counterclockwise)
Preceding gene: 120611673
Following gene: 120611669
Centisome position: 62.03
GC content: 68.91
Gene sequence:
>1515_bases ATGATGGAAATTTTCAACGCCCTGCTGCAGGGCTTCGCGACGGCGGCCACGCCCGCCAACCTGCTGTGGGCGCTGGTGGG CTGCGCGCTCGGCACGGCCGTGGGCGTGCTGCCCGGCATCGGGCCCGCCGTGGCGGTGGCCATGCTGCTGCCCATCACCG CCAAGGTGGAGGTGACGGCCTCCATGATCTTCTTCGCCGGCATCTACTACGGCGCCATGTACGGTGGATCGACCACCTCC ATCCTGCTGAACACGCCCGGTGAAACGGCCAGCATGGTCACGGCGATGGAGGGCAACAAGATGGCCAAGAGCGGGCGCGC GGGCGCGGCCCTGGCCACGTCGGCCATCGGCTCGTTCGTCGCCGGCACCATCGCCACCGTGGTGGTCACGCTCTTCGCGC CGTCCGTGGCCGAATTCGCCGTCAAGCTCGGGCCGCCCGAATACTTCATGCTGATGGTGCTGGCCTTCACCACGGTGAGC GCGGTGCTCGGCCAGAGCACGGTGCGGGGGCTCACCGCGCTGTTCCTGGGCCTCGCGCTGGGCTGCGTGGGCATGGACCA GATTTCCGGCGCGGCGCGCTATACGCTGGGCCAGCCCGAATTGCTGGACGGCGTCGACATCGTGCTGGTGGCCGTAGGCC TGTTCGCGGTGGCCGAGGTACTGTATGCCGCCATGTACGAGGGCCGCCAGGTGGATACCCGCAACCCCATGGGCCGGGTC CACATGACGGCGCGCGACTGGAAGCGCTCCGTGCCCGCATGGCTGCGCGGTACGCTGCTGGGCACGCCGTTCGGCTGCAT TCCCGCGGGCGGCACCGAGATTCCGACCTTCCTCAGCTATGCGACCGAGAAGAAACTCGCCAAGGGCGCGGACCGCGAGG AATTCGGCACGAAGGGCGCCATCGAGGGCGTGGCCGGCCCCGAGGCCGCGAACAACGCCACCGTCACGGCCGCGCTGATC CCGCTGCTCACGCTGGGCATTCCCACCTCCAACACCACCGCGGTGCTGCTGGGCGCGTTCCAGAACTACGGCATCAACCC CGGCCCGCAGCTGTTCTCCAGTTCGGCCGCGCTGGTGTGGGCGCTGATCGCCTCGCTCTACATCGGCAACGTGATGCTGC TGGTGCTCAACCTGCCCATGGTGGGCCTGTGGGTGAAGCTGCTCAAGATCCCGAAGCCGCAGCTCTATGCTGGCATCCTG ATCTTCGCCACGGTGGGGGCCTACGGCATGCGCCAGAGCGCGTTCGACCTGTTCCTGCTCTACGGCATCGGCCTGCTGGG CGTGATGATGCGCCGCTTCGACTTCCCCACCGCGCCCGTGGTGGTCGGCATGATCCTCGGGCCGCTGGCCGAGGCGCAGA TGCGCAACGCGATCTCGATCGGCGAGGGCAACTGGTCGGTGTTCGTGACGCGGCCGATGTCCCTCGCGCTGATCGTGATC GTGGTCGCCGTGCTGGTGCTGCCCCGCCTGCTGCGCGGCTGGGCCGCCCGGCGGCTGCAGGTGGCAACCCCCTGA
Upstream 100 bases:
>100_bases ACGTGTTCACCGGCCTGGCCATTTCCGCGCCGGTGTTCTGGGCTTTCACGCAATTCCTGGCGATCAACCTGCCGGGGCTC ACGCAAACGGGGTGGCTGTG
Downstream 100 bases:
>100_bases GGCGCTTCGCGCCTTCCCCCTCTCTCACGCTGCGCGTGGGAAGGGGGACGCCGCCAGCGCGGCGGCCGCTGGCATGGCCT GCTCCGCGGCCTTCCGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MMEIFNALLQGFATAATPANLLWALVGCALGTAVGVLPGIGPAVAVAMLLPITAKVEVTASMIFFAGIYYGAMYGGSTTS ILLNTPGETASMVTAMEGNKMAKSGRAGAALATSAIGSFVAGTIATVVVTLFAPSVAEFAVKLGPPEYFMLMVLAFTTVS AVLGQSTVRGLTALFLGLALGCVGMDQISGAARYTLGQPELLDGVDIVLVAVGLFAVAEVLYAAMYEGRQVDTRNPMGRV HMTARDWKRSVPAWLRGTLLGTPFGCIPAGGTEIPTFLSYATEKKLAKGADREEFGTKGAIEGVAGPEAANNATVTAALI PLLTLGIPTSNTTAVLLGAFQNYGINPGPQLFSSSAALVWALIASLYIGNVMLLVLNLPMVGLWVKLLKIPKPQLYAGIL IFATVGAYGMRQSAFDLFLLYGIGLLGVMMRRFDFPTAPVVVGMILGPLAEAQMRNAISIGEGNWSVFVTRPMSLALIVI VVAVLVLPRLLRGWAARRLQVATP
Sequences:
>Translated_504_residues MMEIFNALLQGFATAATPANLLWALVGCALGTAVGVLPGIGPAVAVAMLLPITAKVEVTASMIFFAGIYYGAMYGGSTTS ILLNTPGETASMVTAMEGNKMAKSGRAGAALATSAIGSFVAGTIATVVVTLFAPSVAEFAVKLGPPEYFMLMVLAFTTVS AVLGQSTVRGLTALFLGLALGCVGMDQISGAARYTLGQPELLDGVDIVLVAVGLFAVAEVLYAAMYEGRQVDTRNPMGRV HMTARDWKRSVPAWLRGTLLGTPFGCIPAGGTEIPTFLSYATEKKLAKGADREEFGTKGAIEGVAGPEAANNATVTAALI PLLTLGIPTSNTTAVLLGAFQNYGINPGPQLFSSSAALVWALIASLYIGNVMLLVLNLPMVGLWVKLLKIPKPQLYAGIL IFATVGAYGMRQSAFDLFLLYGIGLLGVMMRRFDFPTAPVVVGMILGPLAEAQMRNAISIGEGNWSVFVTRPMSLALIVI VVAVLVLPRLLRGWAARRLQVATP >Mature_504_residues MMEIFNALLQGFATAATPANLLWALVGCALGTAVGVLPGIGPAVAVAMLLPITAKVEVTASMIFFAGIYYGAMYGGSTTS ILLNTPGETASMVTAMEGNKMAKSGRAGAALATSAIGSFVAGTIATVVVTLFAPSVAEFAVKLGPPEYFMLMVLAFTTVS AVLGQSTVRGLTALFLGLALGCVGMDQISGAARYTLGQPELLDGVDIVLVAVGLFAVAEVLYAAMYEGRQVDTRNPMGRV HMTARDWKRSVPAWLRGTLLGTPFGCIPAGGTEIPTFLSYATEKKLAKGADREEFGTKGAIEGVAGPEAANNATVTAALI PLLTLGIPTSNTTAVLLGAFQNYGINPGPQLFSSSAALVWALIASLYIGNVMLLVLNLPMVGLWVKLLKIPKPQLYAGIL IFATVGAYGMRQSAFDLFLLYGIGLLGVMMRRFDFPTAPVVVGMILGPLAEAQMRNAISIGEGNWSVFVTRPMSLALIVI VVAVLVLPRLLRGWAARRLQVATP
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 52584; Mature: 52584
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEIFNALLQGFATAATPANLLWALVGCALGTAVGVLPGIGPAVAVAMLLPITAKVEVTA CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHH SMIFFAGIYYGAMYGGSTTSILLNTPGETASMVTAMEGNKMAKSGRAGAALATSAIGSFV HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHH AGTIATVVVTLFAPSVAEFAVKLGPPEYFMLMVLAFTTVSAVLGQSTVRGLTALFLGLAL HHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GCVGMDQISGAARYTLGQPELLDGVDIVLVAVGLFAVAEVLYAAMYEGRQVDTRNPMGRV HHCCHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE HMTARDWKRSVPAWLRGTLLGTPFGCIPAGGTEIPTFLSYATEKKLAKGADREEFGTKGA EECHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCC IEGVAGPEAANNATVTAALIPLLTLGIPTSNTTAVLLGAFQNYGINPGPQLFSSSAALVW CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCHHHHCCHHHHHH ALIASLYIGNVMLLVLNLPMVGLWVKLLKIPKPQLYAGILIFATVGAYGMRQSAFDLFLL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YGIGLLGVMMRRFDFPTAPVVVGMILGPLAEAQMRNAISIGEGNWSVFVTRPMSLALIVI HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEEEECHHHHHHHHH VVAVLVLPRLLRGWAARRLQVATP HHHHHHHHHHHHHHHHCCEECCCC >Mature Secondary Structure MMEIFNALLQGFATAATPANLLWALVGCALGTAVGVLPGIGPAVAVAMLLPITAKVEVTA CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHH SMIFFAGIYYGAMYGGSTTSILLNTPGETASMVTAMEGNKMAKSGRAGAALATSAIGSFV HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHH AGTIATVVVTLFAPSVAEFAVKLGPPEYFMLMVLAFTTVSAVLGQSTVRGLTALFLGLAL HHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GCVGMDQISGAARYTLGQPELLDGVDIVLVAVGLFAVAEVLYAAMYEGRQVDTRNPMGRV HHCCHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE HMTARDWKRSVPAWLRGTLLGTPFGCIPAGGTEIPTFLSYATEKKLAKGADREEFGTKGA EECHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCC IEGVAGPEAANNATVTAALIPLLTLGIPTSNTTAVLLGAFQNYGINPGPQLFSSSAALVW CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCHHHHCCHHHHHH ALIASLYIGNVMLLVLNLPMVGLWVKLLKIPKPQLYAGILIFATVGAYGMRQSAFDLFLL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YGIGLLGVMMRRFDFPTAPVVVGMILGPLAEAQMRNAISIGEGNWSVFVTRPMSLALIVI HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEEEECHHHHHHHHH VVAVLVLPRLLRGWAARRLQVATP HHHHHHHHHHHHHHHHCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]