| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611673
Identifier: 120611673
GI number: 120611673
Start: 3320258
End: 3320815
Strand: Reverse
Name: 120611673
Synonym: Aave_3010
Alternate gene names: NA
Gene position: 3320815-3320258 (Counterclockwise)
Preceding gene: 120611674
Following gene: 120611672
Centisome position: 62.04
GC content: 73.84
Gene sequence:
>558_bases ATGTCAGAGCCTCTTGCACCTTCCGCGGCGGATGCCGACAGCGACGAGGGCGCCGTCCCTTCCCGGCGCGCGCAGACCAT CGTGGGCGGCGGCGTGCTGCTCGTCGCGGCAGCGCTCGCCGCGGGCGCCCTGCAGATCCCCGGCGACGCCGGTTACGGCG GCGTGGGTCCGAACTTCCTGCCCTGGCTGGTCGCGGCGGTGCTCGCCGTCTGCGGCGGTTTCCTGCTGTGGGAGGCGGCT TCCGGCGGCTTCCGCTCCCTGGGCGCGCCCGGCGGCGCGGCACGGGCCGACAGGCAGGCCTTCGTCTGGGTGTCGGCCGG GCTGCTGCTCAATGCCGCGCTCATCGGCACGGTGGGCTTCATCGTGAGCTGCACGATCTGCTACGTGCTGGCCGTGCAGG GCCTGCGCCGCGCGGGCCGCCAGCCGGCCGCCGGCGCCGCGCGCACCTGGGCCGTGGACGTGTTCACCGGCCTGGCCATT TCCGCGCCGGTGTTCTGGGCTTTCACGCAATTCCTGGCGATCAACCTGCCGGGGCTCACGCAAACGGGGTGGCTGTGA
Upstream 100 bases:
>100_bases CCGCCGTGCTTCCCGAGTTTCCCTTTTTTTTCCGTACCGCGTGGCACGGCCGGTTGGCGCGTGCCCGCGCGCCATGGCCG ATATCCCGAGGACACCCATC
Downstream 100 bases:
>100_bases TGATGGAAATTTTCAACGCCCTGCTGCAGGGCTTCGCGACGGCGGCCACGCCCGCCAACCTGCTGTGGGCGCTGGTGGGC TGCGCGCTCGGCACGGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSEPLAPSAADADSDEGAVPSRRAQTIVGGGVLLVAAALAAGALQIPGDAGYGGVGPNFLPWLVAAVLAVCGGFLLWEAA SGGFRSLGAPGGAARADRQAFVWVSAGLLLNAALIGTVGFIVSCTICYVLAVQGLRRAGRQPAAGAARTWAVDVFTGLAI SAPVFWAFTQFLAINLPGLTQTGWL
Sequences:
>Translated_185_residues MSEPLAPSAADADSDEGAVPSRRAQTIVGGGVLLVAAALAAGALQIPGDAGYGGVGPNFLPWLVAAVLAVCGGFLLWEAA SGGFRSLGAPGGAARADRQAFVWVSAGLLLNAALIGTVGFIVSCTICYVLAVQGLRRAGRQPAAGAARTWAVDVFTGLAI SAPVFWAFTQFLAINLPGLTQTGWL >Mature_184_residues SEPLAPSAADADSDEGAVPSRRAQTIVGGGVLLVAAALAAGALQIPGDAGYGGVGPNFLPWLVAAVLAVCGGFLLWEAAS GGFRSLGAPGGAARADRQAFVWVSAGLLLNAALIGTVGFIVSCTICYVLAVQGLRRAGRQPAAGAARTWAVDVFTGLAIS APVFWAFTQFLAINLPGLTQTGWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18594; Mature: 18462
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPLAPSAADADSDEGAVPSRRAQTIVGGGVLLVAAALAAGALQIPGDAGYGGVGPNFL CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCEECCCCCCCCCCCCCHH PWLVAAVLAVCGGFLLWEAASGGFRSLGAPGGAARADRQAFVWVSAGLLLNAALIGTVGF HHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH IVSCTICYVLAVQGLRRAGRQPAAGAARTWAVDVFTGLAISAPVFWAFTQFLAINLPGLT HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QTGWL CCCCC >Mature Secondary Structure SEPLAPSAADADSDEGAVPSRRAQTIVGGGVLLVAAALAAGALQIPGDAGYGGVGPNFL CCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCEECCCCCCCCCCCCCHH PWLVAAVLAVCGGFLLWEAASGGFRSLGAPGGAARADRQAFVWVSAGLLLNAALIGTVGF HHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH IVSCTICYVLAVQGLRRAGRQPAAGAARTWAVDVFTGLAISAPVFWAFTQFLAINLPGLT HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QTGWL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA