| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120611669
Identifier: 120611669
GI number: 120611669
Start: 3314652
End: 3315092
Strand: Reverse
Name: 120611669
Synonym: Aave_3006
Alternate gene names: NA
Gene position: 3315092-3314652 (Counterclockwise)
Preceding gene: 120611672
Following gene: 120611668
Centisome position: 61.93
GC content: 75.96
Gene sequence:
>441_bases GTGCGATGCACGGCGGGGAAGGGGGCCGTACGGCGGCGTCAGCCGCGCCGCCGCAGCCAGCCGAACCACGCCATCACGGC CACGGGCACGCCCAGCGCGACCCACGACCAGGTGTCGCCCCAGCCGTCCGAGACCAGGGCGCTGACCAGTCCGCTGGCGG TGAGTACGCCCAGGGCGATGGGCCATCCCCACAAACGGCCTGGACGGGCCCCGTCCGCGTGCGGCGCGGCGAACGCCTGG GAATCGGAGGAGCCTGGGATGGCCGCGGGGGATCGCGGCCCGGTGAGGGAGGCGGGCGTCGAGGGCATGGTCTGCTGGGG CTGGAGGGCGTGCCGGCCGGGGGAGCCAGGAGGCGCCGGCGGGTCGGCACAGCAGGCCCCGGGGACTGGGCCGTCCGCCG GGGCACCCCACCAGGGCACTGTTCGCAAACCGCCATTCTAA
Upstream 100 bases:
>100_bases GGGCGAGGGGATGGGGGCGGAACATGGCGGAGGGCCTGGATGGGGTGGAGCGTGGAACCCGGAAGGGGCGGAGAGGAAAA GCGCAGGAGGGCCGCGATCG
Downstream 100 bases:
>100_bases AAGATATTGAGAATGGTTCGTATTGGAATTTATGGAATGTATGAAAGGCAGACCCACTGCCTGCCGGGCAGCGCTGCGGC GCACCGGTGGCGGATGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MRCTAGKGAVRRRQPRRRSQPNHAITATGTPSATHDQVSPQPSETRALTSPLAVSTPRAMGHPHKRPGRAPSACGAANAW ESEEPGMAAGDRGPVREAGVEGMVCWGWRACRPGEPGGAGGSAQQAPGTGPSAGAPHQGTVRKPPF
Sequences:
>Translated_146_residues MRCTAGKGAVRRRQPRRRSQPNHAITATGTPSATHDQVSPQPSETRALTSPLAVSTPRAMGHPHKRPGRAPSACGAANAW ESEEPGMAAGDRGPVREAGVEGMVCWGWRACRPGEPGGAGGSAQQAPGTGPSAGAPHQGTVRKPPF >Mature_146_residues MRCTAGKGAVRRRQPRRRSQPNHAITATGTPSATHDQVSPQPSETRALTSPLAVSTPRAMGHPHKRPGRAPSACGAANAW ESEEPGMAAGDRGPVREAGVEGMVCWGWRACRPGEPGGAGGSAQQAPGTGPSAGAPHQGTVRKPPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15012; Mature: 15012
Theoretical pI: Translated: 11.73; Mature: 11.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCTAGKGAVRRRQPRRRSQPNHAITATGTPSATHDQVSPQPSETRALTSPLAVSTPRAM CCCCCCCCCHHHCCCHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHH GHPHKRPGRAPSACGAANAWESEEPGMAAGDRGPVREAGVEGMVCWGWRACRPGEPGGAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECEECCCCCCCCCCC GSAQQAPGTGPSAGAPHQGTVRKPPF CCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRCTAGKGAVRRRQPRRRSQPNHAITATGTPSATHDQVSPQPSETRALTSPLAVSTPRAM CCCCCCCCCHHHCCCHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHH GHPHKRPGRAPSACGAANAWESEEPGMAAGDRGPVREAGVEGMVCWGWRACRPGEPGGAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECEECCCCCCCCCCC GSAQQAPGTGPSAGAPHQGTVRKPPF CCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA