| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120611657
Identifier: 120611657
GI number: 120611657
Start: 3300428
End: 3302701
Strand: Direct
Name: 120611657
Synonym: Aave_2994
Alternate gene names: NA
Gene position: 3300428-3302701 (Clockwise)
Preceding gene: 120611656
Following gene: 120611660
Centisome position: 61.66
GC content: 71.86
Gene sequence:
>2274_bases ATGCAGTCCGACGCAACGACCTCCCCGTCTTCCGCACATCCATGGCAGTTCTTCCGCGCCGGCGGCGTGGACCAGGTCAT CATCCGCACGGGCGCGGACATCGCGCACCTTGCAGAGCTGGACCAGAAACTCTGGGTGGCGCTGGCCTGCCCCACGCGGG GCGTGGAGTTCGATCCGCGCACGCTCGACCTCATCGATACCGACGGCGACGGGCGCATCCGCCCGCCCGAACTCCTGGCA GCCTGCGCCTGGGCCTGCGAGCGGCTGCGCGATCCGGATGAACTGGCCCGGCCGGGTTCCGCGATGGCCCTCTCGGCACT GGACGACTCCACCGAGGACGGGGCGGCCCTCGCCGAGCAGGCCCGGCGCATCCTGGCACTGGCGGGGCGCGAGGATGCGC AATCCATCACCCTGGACGAAGTGCTGGCGCGCAGCGAGAAGCTGAACGCCCAGCGCTTCAACGGCGACGGGGTCGTGTCT CCCGCCACGGCCGAGGACGACGCGGAGGCCCGCGACGCATTGGAGCGCATCATGGCCACCCACGGCAGCGTGCCGGCGGT GGCCGACCAGCCGGCCGGCGTGGACCGCAAGACGGCCGAGGCGTTCTTCGCCGAAGTGGACGCGCTGCAGCAATGGGCGG ACGGGGTGCAGGCGCATCCGGAGGGAATGCCGCTGGGAGACCGCACGCTGCAGGCGGCCCAGGCCGTGCAGGCGGTGCGC CACAAGGTGGACGACTTCTTCACGCGGGCACGGCTGGCCGCCTACGATCCGCGCGTGCGTACGGCGATGCACCCGTCGGA CGACGACTATGCCGCGCTGGCGCGGCTGGAGCTCTCGCCCGGCTCCGACGCCGTGGCGGCCCTGCCGCTCGCCCCCTTCA CACCCGATGGCACCCTGCCCCTGGAGCGCGGCATCAATCCCGCCTGGGCCGGCGCCGTGCAGGCGCTGCGCGACAAGGCC CTGGTGCCGCTGCTGGGCGAGCCAGCGCGCGGGTCGTTGTCGGAAGCGGACTGGAAGCGCACGCTGGATGCGCTGCAGCC CTGCCTGAAGCAGCTGTCGGCCCGCCCCGCGACCCACCTGGACGCACTCGATGCGGACACCGTGCGCCAGCTGCACGGCA GCGGCGTGCGCGAACGGGTGATGGCGCTGATCACGCAGGACGAGGCCGAGAAGGCGCACAACGGCCACACGCTGGCCCTG GAAAAGCTGCTGCGCTTCAAGCGCGACCTGCTGCGGCTGCTGAACAACTTCGTCTCGTTCTCGGCCTTCTACCAGCGCGA GGGGGCGATCTTCCAGGCGGGGACCCTCTTCCTGGATGCCCGCAGCTGCGACCTGACCGTACAGGTGGCCGACGCTGGGC GCCACGCCAAGCTGGCGGGGCTGGCCAAGACCTACCTCGCCTACTGCGACTGCACGCGCAAGGGCCGGAAGATGGGCATC GTCGCGGCCTTCACGGCCGGCGATGTCGATTTCCTGTTCGTGGGCCGCAATGGCGTGTTCTACGACCGCGACGGCCTCGA CTGGGATGCGACCATCACCAAGATCATCGAAAACCCCACGAGCATTGCCCAGGCCTTCTTCTCGCCGTACAAGAAGTTCC TGCGCATGATCGAGGAGCAGGTGGCCAAGCGGGCGGCCGCGAGCGATTCCCGGGTGGAGAAATCGCTGGGCACCACGGCC GGCAGCCTGGCCACCGCCCCCGGCAAGACCCTCGCGAGCGCCGCGGCACCGGCAGCGCCTGCGGGCGCACCCGACACGCA GCGCCGAATGGACGTGGGCACGGTGGCCGCGCTGGGCGTGGCCCTGGGCAGCCTGAGCGCCGTCGCCGTGGGCATCTTCG CGAAGTTCGTGGACCTGGGCGCCTGGATACCGATCGCGCTGCTCGGCATCGTGTTGGCCATCTCGGGGCCGAGCATGCTG ATCGCCTGGCTCAAGCTGCGCCAGCGCAGCCTGGGCCCGATCCTGGACGCCAGCGGCTGGGCCATCAACGGCCGGATGCG CATCAACACCCGCCTGGGCGGATCGCTGTCGCAGACGGCCCATGTGCCGCCGGGCGCGCGCCGCATGCTGAACGATCCGT TCCCCGAGTCGCGCAAGCCGGCGTGGACGGCAGCCTGCGTGGCGGTGGTTCTGGTGGTGGCGGGCGTGATGGCCTGGCGC ATGGGCTGGTTCCACCACCGGCCCGCGGCGCCGGCCGGTGCGGCGGCGACTTCGCAGGCGGTGCCGCCCGCGCCCGCCGC CAGCGGCCCGGCCGCGGCCGCATCGGCGCCCTGA
Upstream 100 bases:
>100_bases GTCCTACGCGCGGGGCGCCGCATGCCCTGCACAATCGACCGGCCCGGCAGCCCATCCGGCGCCGCCCGGTACCCTCTTCC CCGATTTCCCGCACCGATCC
Downstream 100 bases:
>100_bases GTTCCCCGGCCCGGGACTCGGCCCGCCCGTCGATTACAGGAAGGACGCCTGGATCGGTGCCACCGCCTGCACCACGTCGC CGCACTGGGCACGGTGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 757; Mature: 757
Protein sequence:
>757_residues MQSDATTSPSSAHPWQFFRAGGVDQVIIRTGADIAHLAELDQKLWVALACPTRGVEFDPRTLDLIDTDGDGRIRPPELLA ACAWACERLRDPDELARPGSAMALSALDDSTEDGAALAEQARRILALAGREDAQSITLDEVLARSEKLNAQRFNGDGVVS PATAEDDAEARDALERIMATHGSVPAVADQPAGVDRKTAEAFFAEVDALQQWADGVQAHPEGMPLGDRTLQAAQAVQAVR HKVDDFFTRARLAAYDPRVRTAMHPSDDDYAALARLELSPGSDAVAALPLAPFTPDGTLPLERGINPAWAGAVQALRDKA LVPLLGEPARGSLSEADWKRTLDALQPCLKQLSARPATHLDALDADTVRQLHGSGVRERVMALITQDEAEKAHNGHTLAL EKLLRFKRDLLRLLNNFVSFSAFYQREGAIFQAGTLFLDARSCDLTVQVADAGRHAKLAGLAKTYLAYCDCTRKGRKMGI VAAFTAGDVDFLFVGRNGVFYDRDGLDWDATITKIIENPTSIAQAFFSPYKKFLRMIEEQVAKRAAASDSRVEKSLGTTA GSLATAPGKTLASAAAPAAPAGAPDTQRRMDVGTVAALGVALGSLSAVAVGIFAKFVDLGAWIPIALLGIVLAISGPSML IAWLKLRQRSLGPILDASGWAINGRMRINTRLGGSLSQTAHVPPGARRMLNDPFPESRKPAWTAACVAVVLVVAGVMAWR MGWFHHRPAAPAGAAATSQAVPPAPAASGPAAAASAP
Sequences:
>Translated_757_residues MQSDATTSPSSAHPWQFFRAGGVDQVIIRTGADIAHLAELDQKLWVALACPTRGVEFDPRTLDLIDTDGDGRIRPPELLA ACAWACERLRDPDELARPGSAMALSALDDSTEDGAALAEQARRILALAGREDAQSITLDEVLARSEKLNAQRFNGDGVVS PATAEDDAEARDALERIMATHGSVPAVADQPAGVDRKTAEAFFAEVDALQQWADGVQAHPEGMPLGDRTLQAAQAVQAVR HKVDDFFTRARLAAYDPRVRTAMHPSDDDYAALARLELSPGSDAVAALPLAPFTPDGTLPLERGINPAWAGAVQALRDKA LVPLLGEPARGSLSEADWKRTLDALQPCLKQLSARPATHLDALDADTVRQLHGSGVRERVMALITQDEAEKAHNGHTLAL EKLLRFKRDLLRLLNNFVSFSAFYQREGAIFQAGTLFLDARSCDLTVQVADAGRHAKLAGLAKTYLAYCDCTRKGRKMGI VAAFTAGDVDFLFVGRNGVFYDRDGLDWDATITKIIENPTSIAQAFFSPYKKFLRMIEEQVAKRAAASDSRVEKSLGTTA GSLATAPGKTLASAAAPAAPAGAPDTQRRMDVGTVAALGVALGSLSAVAVGIFAKFVDLGAWIPIALLGIVLAISGPSML IAWLKLRQRSLGPILDASGWAINGRMRINTRLGGSLSQTAHVPPGARRMLNDPFPESRKPAWTAACVAVVLVVAGVMAWR MGWFHHRPAAPAGAAATSQAVPPAPAASGPAAAASAP >Mature_757_residues MQSDATTSPSSAHPWQFFRAGGVDQVIIRTGADIAHLAELDQKLWVALACPTRGVEFDPRTLDLIDTDGDGRIRPPELLA ACAWACERLRDPDELARPGSAMALSALDDSTEDGAALAEQARRILALAGREDAQSITLDEVLARSEKLNAQRFNGDGVVS PATAEDDAEARDALERIMATHGSVPAVADQPAGVDRKTAEAFFAEVDALQQWADGVQAHPEGMPLGDRTLQAAQAVQAVR HKVDDFFTRARLAAYDPRVRTAMHPSDDDYAALARLELSPGSDAVAALPLAPFTPDGTLPLERGINPAWAGAVQALRDKA LVPLLGEPARGSLSEADWKRTLDALQPCLKQLSARPATHLDALDADTVRQLHGSGVRERVMALITQDEAEKAHNGHTLAL EKLLRFKRDLLRLLNNFVSFSAFYQREGAIFQAGTLFLDARSCDLTVQVADAGRHAKLAGLAKTYLAYCDCTRKGRKMGI VAAFTAGDVDFLFVGRNGVFYDRDGLDWDATITKIIENPTSIAQAFFSPYKKFLRMIEEQVAKRAAASDSRVEKSLGTTA GSLATAPGKTLASAAAPAAPAGAPDTQRRMDVGTVAALGVALGSLSAVAVGIFAKFVDLGAWIPIALLGIVLAISGPSML IAWLKLRQRSLGPILDASGWAINGRMRINTRLGGSLSQTAHVPPGARRMLNDPFPESRKPAWTAACVAVVLVVAGVMAWR MGWFHHRPAAPAGAAATSQAVPPAPAASGPAAAASAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80385; Mature: 80385
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS50222 EF_HAND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSDATTSPSSAHPWQFFRAGGVDQVIIRTGADIAHLAELDQKLWVALACPTRGVEFDPR CCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHEEEEECCCCCCCCCCC TLDLIDTDGDGRIRPPELLAACAWACERLRDPDELARPGSAMALSALDDSTEDGAALAEQ EEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCEEEECCCCCCCCHHHHHHH ARRILALAGREDAQSITLDEVLARSEKLNAQRFNGDGVVSPATAEDDAEARDALERIMAT HHHHHHHCCCCCCHHCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHH HGSVPAVADQPAGVDRKTAEAFFAEVDALQQWADGVQAHPEGMPLGDRTLQAAQAVQAVR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH HKVDDFFTRARLAAYDPRVRTAMHPSDDDYAALARLELSPGSDAVAALPLAPFTPDGTLP HHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCC LERGINPAWAGAVQALRDKALVPLLGEPARGSLSEADWKRTLDALQPCLKQLSARPATHL HHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH DALDADTVRQLHGSGVRERVMALITQDEAEKAHNGHTLALEKLLRFKRDLLRLLNNFVSF HHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH SAFYQREGAIFQAGTLFLDARSCDLTVQVADAGRHAKLAGLAKTYLAYCDCTRKGRKMGI HHHHHHCCCEEEECEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE VAAFTAGDVDFLFVGRNGVFYDRDGLDWDATITKIIENPTSIAQAFFSPYKKFLRMIEEQ EEEEECCCEEEEEECCCCEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VAKRAAASDSRVEKSLGTTAGSLATAPGKTLASAAAPAAPAGAPDTQRRMDVGTVAALGV HHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH ALGSLSAVAVGIFAKFVDLGAWIPIALLGIVLAISGPSMLIAWLKLRQRSLGPILDASGW HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCE AINGRMRINTRLGGSLSQTAHVPPGARRMLNDPFPESRKPAWTAACVAVVLVVAGVMAWR EEECEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MGWFHHRPAAPAGAAATSQAVPPAPAASGPAAAASAP HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQSDATTSPSSAHPWQFFRAGGVDQVIIRTGADIAHLAELDQKLWVALACPTRGVEFDPR CCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHEEEEECCCCCCCCCCC TLDLIDTDGDGRIRPPELLAACAWACERLRDPDELARPGSAMALSALDDSTEDGAALAEQ EEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCEEEECCCCCCCCHHHHHHH ARRILALAGREDAQSITLDEVLARSEKLNAQRFNGDGVVSPATAEDDAEARDALERIMAT HHHHHHHCCCCCCHHCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHH HGSVPAVADQPAGVDRKTAEAFFAEVDALQQWADGVQAHPEGMPLGDRTLQAAQAVQAVR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH HKVDDFFTRARLAAYDPRVRTAMHPSDDDYAALARLELSPGSDAVAALPLAPFTPDGTLP HHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCC LERGINPAWAGAVQALRDKALVPLLGEPARGSLSEADWKRTLDALQPCLKQLSARPATHL HHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH DALDADTVRQLHGSGVRERVMALITQDEAEKAHNGHTLALEKLLRFKRDLLRLLNNFVSF HHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH SAFYQREGAIFQAGTLFLDARSCDLTVQVADAGRHAKLAGLAKTYLAYCDCTRKGRKMGI HHHHHHCCCEEEECEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE VAAFTAGDVDFLFVGRNGVFYDRDGLDWDATITKIIENPTSIAQAFFSPYKKFLRMIEEQ EEEEECCCEEEEEECCCCEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH VAKRAAASDSRVEKSLGTTAGSLATAPGKTLASAAAPAAPAGAPDTQRRMDVGTVAALGV HHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH ALGSLSAVAVGIFAKFVDLGAWIPIALLGIVLAISGPSMLIAWLKLRQRSLGPILDASGW HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCE AINGRMRINTRLGGSLSQTAHVPPGARRMLNDPFPESRKPAWTAACVAVVLVVAGVMAWR EEECEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MGWFHHRPAAPAGAAATSQAVPPAPAASGPAAAASAP HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA