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The map label for this gene is ydjR [C]

Identifier: 120611625

GI number: 120611625

Start: 3251959

End: 3252567

Strand: Reverse

Name: ydjR [C]

Synonym: Aave_2962

Alternate gene names: 120611625

Gene position: 3252567-3251959 (Counterclockwise)

Preceding gene: 120611626

Following gene: 120611624

Centisome position: 60.76

GC content: 73.07

Gene sequence:

>609_bases
ATGGCATTGCAGCGCTTCGACTTGGCCGCCATCGCGCCGACCCCGTGGAGGAACGGCGGCGGCGCCACGCGCGAGATCGT
CTGCTGGCCTCCCGGCGCCGGCATGGACGGCTTCGGCTGGCGCGTGAGCGCGGCCACCATCGACCGCGCGGGCCCGTTCT
CGGCCTACCCTGGCATACAGCGGCAGATCATGCTGCTCGACGGCGAAGGCGTGCACCTGAGCGCGAGCGGCATCGACCAC
CGGCTCGACGAGCCCTGGCGCCCCTGGTCGTTCGACGGGGCTGCCGCACTCGACTGCACGCCCATCGGCGGAGCCTCCAC
GGATTTCAATCTCATGCTGCGCCGCGGGGCATGGCAGGGCACCATCGAAGTCGTGTCGGGCAGCGTGCGGCCGGGCTCCA
CGCCCGCCGGTGTCTGCCTGGTGCTCGCCGGCACGTGGAGCGACGGTGCCGGCGAGGACTACAGGCCGGGCCATGGACTG
TGGTGGGGCGAACAGGCAGGCCAGCCGCTGCAGCTCGCTCCCGAGGATGCCGACAGGGCCGTGCTGGCCTGGATCGGCCT
GGCGCCGGACGCCGGAGCGGCCCCCGCGCCGGCCCTGCAGCACTCTTGA

Upstream 100 bases:

>100_bases
ACCTCGCCGGAGTTCCCCGGCCTGGCCGGCGAACTCCCTGCCGGCGCGCCCATGGCCCATCCGCTCTTCCCGCTGCTGGC
GGGCGAGGGCGCCTGACGCC

Downstream 100 bases:

>100_bases
TGGAACGGAGCGCCGCGCGCTCCAGAGGGAATCCCATGCAGCCTACACCTTTTTCTTCCCTGTCCAGCGCCGACGGCTGC
TGGACCGGCCTGCGGCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MALQRFDLAAIAPTPWRNGGGATREIVCWPPGAGMDGFGWRVSAATIDRAGPFSAYPGIQRQIMLLDGEGVHLSASGIDH
RLDEPWRPWSFDGAAALDCTPIGGASTDFNLMLRRGAWQGTIEVVSGSVRPGSTPAGVCLVLAGTWSDGAGEDYRPGHGL
WWGEQAGQPLQLAPEDADRAVLAWIGLAPDAGAAPAPALQHS

Sequences:

>Translated_202_residues
MALQRFDLAAIAPTPWRNGGGATREIVCWPPGAGMDGFGWRVSAATIDRAGPFSAYPGIQRQIMLLDGEGVHLSASGIDH
RLDEPWRPWSFDGAAALDCTPIGGASTDFNLMLRRGAWQGTIEVVSGSVRPGSTPAGVCLVLAGTWSDGAGEDYRPGHGL
WWGEQAGQPLQLAPEDADRAVLAWIGLAPDAGAAPAPALQHS
>Mature_201_residues
ALQRFDLAAIAPTPWRNGGGATREIVCWPPGAGMDGFGWRVSAATIDRAGPFSAYPGIQRQIMLLDGEGVHLSASGIDHR
LDEPWRPWSFDGAAALDCTPIGGASTDFNLMLRRGAWQGTIEVVSGSVRPGSTPAGVCLVLAGTWSDGAGEDYRPGHGLW
WGEQAGQPLQLAPEDADRAVLAWIGLAPDAGAAPAPALQHS

Specific function: Unknown

COG id: COG3758

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydjR [H]

Homologues:

Organism=Escherichia coli, GI87081963, Length=149, Percent_Identity=32.2147651006711, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR010282 [H]

Pfam domain/function: PF05962 HutD [H]

EC number: NA

Molecular weight: Translated: 21163; Mature: 21032

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALQRFDLAAIAPTPWRNGGGATREIVCWPPGAGMDGFGWRVSAATIDRAGPFSAYPGIQ
CCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCC
RQIMLLDGEGVHLSASGIDHRLDEPWRPWSFDGAAALDCTPIGGASTDFNLMLRRGAWQG
EEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCC
TIEVVSGSVRPGSTPAGVCLVLAGTWSDGAGEDYRPGHGLWWGEQAGQPLQLAPEDADRA
EEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCCCE
VLAWIGLAPDAGAAPAPALQHS
EEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALQRFDLAAIAPTPWRNGGGATREIVCWPPGAGMDGFGWRVSAATIDRAGPFSAYPGIQ
CCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCC
RQIMLLDGEGVHLSASGIDHRLDEPWRPWSFDGAAALDCTPIGGASTDFNLMLRRGAWQG
EEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCC
TIEVVSGSVRPGSTPAGVCLVLAGTWSDGAGEDYRPGHGLWWGEQAGQPLQLAPEDADRA
EEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCCCE
VLAWIGLAPDAGAAPAPALQHS
EEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2203753 [H]