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The map label for this gene is 120611626

Identifier: 120611626

GI number: 120611626

Start: 3252572

End: 3253426

Strand: Reverse

Name: 120611626

Synonym: Aave_2963

Alternate gene names: NA

Gene position: 3253426-3252572 (Counterclockwise)

Preceding gene: 120611627

Following gene: 120611625

Centisome position: 60.78

GC content: 72.28

Gene sequence:

>855_bases
ATGCTGCGCGCCGCCGCCACTGCCGCGATCGCCCGGCGCGTGTCCGAATGTGTGACCGACGAACTCGTGGCCGATTTCGC
ACGCCACGGTGCAGTGTGCCTGCGCGGCCTGCTCACGCCCGACGAGGTGGCGCTGCTGGAGGGCGGCATCGACGCCAACC
TGGCCTCTCCCAGCCCGCGCGCCAAGATCGCCAGCCGCGCGGACGACCCGGGCCGCTTCTTCGAGGACTTCTGCAACTGG
CAGGACATTCCCGCGTTCGGCCGCTTCATCGCCGAGACGCCCGTGGCCCTCGCCGCGCAGCGGCTCATGCGCTCGCGCGG
CGTGCGCCTCTACCACGACCACGTGCTGGTCAAGGAGCCGGGCACGCGCCAGCGCACGCCGTGGCACCAGGACCAGCCCT
ACTACAACATCGACGGCATGCAGAACATCAGCTGCTGGATCCCGGTGGATCCGGTGCCGCGTGCCAGCACGCTGGAGTTC
GTGGCCGGCTCGCACCGAGGGCCGTGGCTCATGCCGCGCAGCTTCATGGACCACCAGGCGAAGTGGTTCCCCGAGGGCAG
CCTGCAGGACCTGCCCGACGTGGAGGCCCGACGTGCGGCCTTCGACATCCTGGGCTGGGACATCGAGCCCGGCGACGTGG
TGTGCTTCCACATGCTCACCCTGCACGCGGCCGGCGGCTTCGAGGGGCCGGGCCGGCGGCGGGTGTTCTCCGTGCGGTTC
CTGGGCGACGACGTGCGCCATGCGCCGCGCGCCTGGACCACCTCGCCGGAGTTCCCCGGCCTGGCCGGCGAACTCCCTGC
CGGCGCGCCCATGGCCCATCCGCTCTTCCCGCTGCTGGCGGGCGAGGGCGCCTGA

Upstream 100 bases:

>100_bases
ACGATCCGGCCAGTGGCGTCATGCGGCATGCGGACGCTGGCTACGACATAGCCATCGCCACGGCGAAGAAGCACCAGCTG
CACCTGCCGATGGTGAAGTG

Downstream 100 bases:

>100_bases
CGCCATGGCATTGCAGCGCTTCGACTTGGCCGCCATCGCGCCGACCCCGTGGAGGAACGGCGGCGGCGCCACGCGCGAGA
TCGTCTGCTGGCCTCCCGGC

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: Phytanoyl-CoA Dioxygenase Family Protein; Dioxygenase; Deoxygenase; Phytanoyl-CoA Dioxygenase Protein; Phytanoyl-CoA Dioxygenase Superfamily

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MLRAAATAAIARRVSECVTDELVADFARHGAVCLRGLLTPDEVALLEGGIDANLASPSPRAKIASRADDPGRFFEDFCNW
QDIPAFGRFIAETPVALAAQRLMRSRGVRLYHDHVLVKEPGTRQRTPWHQDQPYYNIDGMQNISCWIPVDPVPRASTLEF
VAGSHRGPWLMPRSFMDHQAKWFPEGSLQDLPDVEARRAAFDILGWDIEPGDVVCFHMLTLHAAGGFEGPGRRRVFSVRF
LGDDVRHAPRAWTTSPEFPGLAGELPAGAPMAHPLFPLLAGEGA

Sequences:

>Translated_284_residues
MLRAAATAAIARRVSECVTDELVADFARHGAVCLRGLLTPDEVALLEGGIDANLASPSPRAKIASRADDPGRFFEDFCNW
QDIPAFGRFIAETPVALAAQRLMRSRGVRLYHDHVLVKEPGTRQRTPWHQDQPYYNIDGMQNISCWIPVDPVPRASTLEF
VAGSHRGPWLMPRSFMDHQAKWFPEGSLQDLPDVEARRAAFDILGWDIEPGDVVCFHMLTLHAAGGFEGPGRRRVFSVRF
LGDDVRHAPRAWTTSPEFPGLAGELPAGAPMAHPLFPLLAGEGA
>Mature_284_residues
MLRAAATAAIARRVSECVTDELVADFARHGAVCLRGLLTPDEVALLEGGIDANLASPSPRAKIASRADDPGRFFEDFCNW
QDIPAFGRFIAETPVALAAQRLMRSRGVRLYHDHVLVKEPGTRQRTPWHQDQPYYNIDGMQNISCWIPVDPVPRASTLEF
VAGSHRGPWLMPRSFMDHQAKWFPEGSLQDLPDVEARRAAFDILGWDIEPGDVVCFHMLTLHAAGGFEGPGRRRVFSVRF
LGDDVRHAPRAWTTSPEFPGLAGELPAGAPMAHPLFPLLAGEGA

Specific function: Unknown

COG id: COG5285

COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31294; Mature: 31294

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRAAATAAIARRVSECVTDELVADFARHGAVCLRGLLTPDEVALLEGGIDANLASPSPR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCH
AKIASRADDPGRFFEDFCNWQDIPAFGRFIAETPVALAAQRLMRSRGVRLYHDHVLVKEP
HHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCEEEECEEEEECC
GTRQRTPWHQDQPYYNIDGMQNISCWIPVDPVPRASTLEFVAGSHRGPWLMPRSFMDHQA
CCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCHHHHHCCH
KWFPEGSLQDLPDVEARRAAFDILGWDIEPGDVVCFHMLTLHAAGGFEGPGRRRVFSVRF
HCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEE
LGDDVRHAPRAWTTSPEFPGLAGELPAGAPMAHPLFPLLAGEGA
CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MLRAAATAAIARRVSECVTDELVADFARHGAVCLRGLLTPDEVALLEGGIDANLASPSPR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCH
AKIASRADDPGRFFEDFCNWQDIPAFGRFIAETPVALAAQRLMRSRGVRLYHDHVLVKEP
HHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCCEEEECEEEEECC
GTRQRTPWHQDQPYYNIDGMQNISCWIPVDPVPRASTLEFVAGSHRGPWLMPRSFMDHQA
CCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCHHHHHCCH
KWFPEGSLQDLPDVEARRAAFDILGWDIEPGDVVCFHMLTLHAAGGFEGPGRRRVFSVRF
HCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEE
LGDDVRHAPRAWTTSPEFPGLAGELPAGAPMAHPLFPLLAGEGA
CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA