| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is engXCA [H]
Identifier: 120610779
GI number: 120610779
Start: 2303147
End: 2304637
Strand: Reverse
Name: engXCA [H]
Synonym: Aave_2102
Alternate gene names: 120610779
Gene position: 2304637-2303147 (Counterclockwise)
Preceding gene: 120610780
Following gene: 120610777
Centisome position: 43.06
GC content: 68.54
Gene sequence:
>1491_bases ATGGCACAACTTGGATCCGTGGGGAGGGCCGTCGCACTGGCCGCCAGCCTGCTCGCATGCGGCAACGTGGCATGGAGCTA TTCCATCAGCAACGGCCAGGTGGTGGACGACGCCGGCCAGGCCGTGCAGCTGCGCGGCGTGAACTGGTTCGGCTTCGAGA CCGGAGAGCACGTGGTGCACGGCCTCTGGGCGCGCAACTGGAAGGACATGATCGGCCAGATGCAGCAGCAGGGCTTCAAC GCCGTGCGCCTGCCCTTCTGCCCGCGAAGCCTGCGCGGCACCGGCCCCGGCAGCATCGACTACAGCCGCAACCCCGACCT GCAGGGACTGAACTCGCAGCAGATCCTCGACAAGGTCGTGCAGGAAATCAGCGACCGCGGCATGTTCGTGCTGCTGGACC ACCACACGCCGGATTGCCAGGCCATCAGCGAGCTCTGGTACACGCCGGCCTACAGCGAGCAGCAGTGGATCGCCGACCTG GTCTTCGCCGCCAACCGCTACAAGGGCGTGCCCGGGGTGATCGGCATCGACCTGAAGAACGAGCCCCACGGCGCCGCCAC CTGGGGCACCGGCAACGCTGCCACCGACTGGAACCGCGCCGCCGAGCGCGCCGCCGCCGCGGTCGTGCAGGCCGCGCCGC GCTGGATCGTCGCGGTGGAAGGCGTCGGCGAGAACCCTTCCTGTTCCACCAGCAGCGGCCACTTCTGGGGCGGCAACCTG GAACCCCTGGCCTGCACGCCGCTGGACATTCCCGCCGACCGCCTGCTGCTGGCGCCGCACGCCTACGGGCCCGACGTGGC CATGCAGTCGTATTTCAACGCAGCGGACTTCCCCGCCAACATGCCCGGCATCTGGGAGCAGCACTTCGGCCGCTTCGTGC AGGCCGGCCACGCCGTGCTGCCGGGCGAATTCGGCGGCAAGTACGGCCGCGGCGACCCGCGCGACGTGCAGTGGCAGAAC GCCCTGGTGGCCTACCTCATCGGCAAGGGCATCCGCAGCGGCTTCTACTGGTCCTGGAATCCCAACAGCGGCGACACCGG CGGCATCCTGGACGACGACTGGAACACGGTGCGCACGGACAAGGTGCAGCTCCTGAACCGCCTCTGGGGCACGGGCGGGG CCAACCCCGACCCCGACCCCAACCCCAACCCCAACCCCAACCCCAATCCCAATCCCAATCCCAATCCCAATCCCAATCCG AATCCCAATCCGAATCCGAATCCGAATCCGAATTCGGGTGCGAGCTTCGGTGTGCGGCAGGTCACCGACAGCGACTGGGG CGCGGGCTACTGCCAGCGCGTGCAGGTGACCAACAATGGTGCCGCCGCGGGCGACTGGGCAATATCCGTCGGCGTGCAGG GCACGGTCAACAACCTCTGGAATGCGGTCTGGACGCAGTCGGGCGACACGCTGCAGGCCTCCGGCGTCTCGTGGAACCGG ACGCTCGCGCCAGGGGGCACCGCCGAATTCGGTTTCTGCGCGGCGCGCTGA
Upstream 100 bases:
>100_bases GTGCGCTTCGCCAGGCCCCGCGCCAGCAAGGCACGGCCTTCGCGGCGCGGCCACCACACTCGAATTGATCCGGCAAGACC GGGAGGGAGAGAAAGAAACC
Downstream 100 bases:
>100_bases CCGGCGCGCCTGCAGGCGCCAAGCGCCGGCCAGCCCGGGCGGCGCCTGCGGCGGCCCACCGCCGTCAGCCGTGCACCAGC GCCGCCTCGCGCTGGATCTG
Product: cellulase
Products: NA
Alternate protein names: Cellulase; Endo-1,4-beta-glucanase [H]
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MAQLGSVGRAVALAASLLACGNVAWSYSISNGQVVDDAGQAVQLRGVNWFGFETGEHVVHGLWARNWKDMIGQMQQQGFN AVRLPFCPRSLRGTGPGSIDYSRNPDLQGLNSQQILDKVVQEISDRGMFVLLDHHTPDCQAISELWYTPAYSEQQWIADL VFAANRYKGVPGVIGIDLKNEPHGAATWGTGNAATDWNRAAERAAAAVVQAAPRWIVAVEGVGENPSCSTSSGHFWGGNL EPLACTPLDIPADRLLLAPHAYGPDVAMQSYFNAADFPANMPGIWEQHFGRFVQAGHAVLPGEFGGKYGRGDPRDVQWQN ALVAYLIGKGIRSGFYWSWNPNSGDTGGILDDDWNTVRTDKVQLLNRLWGTGGANPDPDPNPNPNPNPNPNPNPNPNPNP NPNPNPNPNPNSGASFGVRQVTDSDWGAGYCQRVQVTNNGAAAGDWAISVGVQGTVNNLWNAVWTQSGDTLQASGVSWNR TLAPGGTAEFGFCAAR
Sequences:
>Translated_496_residues MAQLGSVGRAVALAASLLACGNVAWSYSISNGQVVDDAGQAVQLRGVNWFGFETGEHVVHGLWARNWKDMIGQMQQQGFN AVRLPFCPRSLRGTGPGSIDYSRNPDLQGLNSQQILDKVVQEISDRGMFVLLDHHTPDCQAISELWYTPAYSEQQWIADL VFAANRYKGVPGVIGIDLKNEPHGAATWGTGNAATDWNRAAERAAAAVVQAAPRWIVAVEGVGENPSCSTSSGHFWGGNL EPLACTPLDIPADRLLLAPHAYGPDVAMQSYFNAADFPANMPGIWEQHFGRFVQAGHAVLPGEFGGKYGRGDPRDVQWQN ALVAYLIGKGIRSGFYWSWNPNSGDTGGILDDDWNTVRTDKVQLLNRLWGTGGANPDPDPNPNPNPNPNPNPNPNPNPNP NPNPNPNPNPNSGASFGVRQVTDSDWGAGYCQRVQVTNNGAAAGDWAISVGVQGTVNNLWNAVWTQSGDTLQASGVSWNR TLAPGGTAEFGFCAAR >Mature_495_residues AQLGSVGRAVALAASLLACGNVAWSYSISNGQVVDDAGQAVQLRGVNWFGFETGEHVVHGLWARNWKDMIGQMQQQGFNA VRLPFCPRSLRGTGPGSIDYSRNPDLQGLNSQQILDKVVQEISDRGMFVLLDHHTPDCQAISELWYTPAYSEQQWIADLV FAANRYKGVPGVIGIDLKNEPHGAATWGTGNAATDWNRAAERAAAAVVQAAPRWIVAVEGVGENPSCSTSSGHFWGGNLE PLACTPLDIPADRLLLAPHAYGPDVAMQSYFNAADFPANMPGIWEQHFGRFVQAGHAVLPGEFGGKYGRGDPRDVQWQNA LVAYLIGKGIRSGFYWSWNPNSGDTGGILDDDWNTVRTDKVQLLNRLWGTGGANPDPDPNPNPNPNPNPNPNPNPNPNPN PNPNPNPNPNSGASFGVRQVTDSDWGAGYCQRVQVTNNGAAAGDWAISVGVQGTVNNLWNAVWTQSGDTLQASGVSWNRT LAPGGTAEFGFCAAR
Specific function: Unknown
COG id: COG2730
COG function: function code G; Endoglucanase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CBM2 (carbohydrate binding type-2) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008965 - InterPro: IPR012291 - InterPro: IPR001919 - InterPro: IPR001547 - InterPro: IPR018087 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00553 CBM_2; PF00150 Cellulase [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 53229; Mature: 53098
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00561 CBD_BACTERIAL ; PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQLGSVGRAVALAASLLACGNVAWSYSISNGQVVDDAGQAVQLRGVNWFGFETGEHVVH CCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCEEECCCCCEEEEECCEEECCCCHHHHHH GLWARNWKDMIGQMQQQGFNAVRLPFCPRSLRGTGPGSIDYSRNPDLQGLNSQQILDKVV HHHHHHHHHHHHHHHHCCCCEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH QEISDRGMFVLLDHHTPDCQAISELWYTPAYSEQQWIADLVFAANRYKGVPGVIGIDLKN HHHHCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC EPHGAATWGTGNAATDWNRAAERAAAAVVQAAPRWIVAVEGVGENPSCSTSSGHFWGGNL CCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCC EPLACTPLDIPADRLLLAPHAYGPDVAMQSYFNAADFPANMPGIWEQHFGRFVQAGHAVL CCEEECCCCCCCCCEEECCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEC PGEFGGKYGRGDPRDVQWQNALVAYLIGKGIRSGFYWSWNPNSGDTGGILDDDWNTVRTD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHH KVQLLNRLWGTGGANPDPDPNPNPNPNPNPNPNPNPNPNPNPNPNPNPNPNSGASFGVRQ HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE VTDSDWGAGYCQRVQVTNNGAAAGDWAISVGVQGTVNNLWNAVWTQSGDTLQASGVSWNR ECCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCCC TLAPGGTAEFGFCAAR EECCCCCCCCCEEECC >Mature Secondary Structure AQLGSVGRAVALAASLLACGNVAWSYSISNGQVVDDAGQAVQLRGVNWFGFETGEHVVH CCCCHHHHHHHHHHHHHHHCCEEEEEECCCCEEECCCCCEEEEECCEEECCCCHHHHHH GLWARNWKDMIGQMQQQGFNAVRLPFCPRSLRGTGPGSIDYSRNPDLQGLNSQQILDKVV HHHHHHHHHHHHHHHHCCCCEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH QEISDRGMFVLLDHHTPDCQAISELWYTPAYSEQQWIADLVFAANRYKGVPGVIGIDLKN HHHHCCCEEEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC EPHGAATWGTGNAATDWNRAAERAAAAVVQAAPRWIVAVEGVGENPSCSTSSGHFWGGNL CCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCC EPLACTPLDIPADRLLLAPHAYGPDVAMQSYFNAADFPANMPGIWEQHFGRFVQAGHAVL CCEEECCCCCCCCCEEECCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEC PGEFGGKYGRGDPRDVQWQNALVAYLIGKGIRSGFYWSWNPNSGDTGGILDDDWNTVRTD CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHH KVQLLNRLWGTGGANPDPDPNPNPNPNPNPNPNPNPNPNPNPNPNPNPNPNSGASFGVRQ HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE VTDSDWGAGYCQRVQVTNNGAAAGDWAISVGVQGTVNNLWNAVWTQSGDTLQASGVSWNR ECCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCCC TLAPGGTAEFGFCAAR EECCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2373365; 12024217 [H]