| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610658
Identifier: 120610658
GI number: 120610658
Start: 2147269
End: 2148216
Strand: Direct
Name: 120610658
Synonym: Aave_1978
Alternate gene names: NA
Gene position: 2147269-2148216 (Clockwise)
Preceding gene: 120610656
Following gene: 120610663
Centisome position: 40.12
GC content: 75.21
Gene sequence:
>948_bases TTGCCCTCAAACCTGAACCCCCTCGGCGCGCTGCCGGCGCGTTTCCGCCGTGAACGTGTGCTGGTCGTCGGCTGCGGCGA CGTGGGCCTGCGCGCCGTGCGCGCGCTGCAGGCCGGCCAGGGCGCGCCACGGCCGCGCGTCCTGGCGCTGACCTCCACCC CCGCGCGCATGGCCGGACTGCGCGCGGCCGGCACCGTGCCGCTCGTGGGTGATCTGGACGACGTGCGCACCCTGCGGCGC CTCGCGGGCCTCGCCACGCGCGTGCTGCACCTGGCGCCGCCGCCCGGCGAGCGCGATGCGGGCACCGCATGGTGGACCGA CCCCCGCACCGTGGCCCTGGCGCGCGTGCTGCGGTTGCGCAGCCTGCCGCGCGCACTGGTGTACGGCTCGACCAGCGGCG TCTATGGCGACTGCGGCGGCGCGCGCGTGCCCGAGACGCGGCCCGTCGCGCCCGCCACGCCGCGGGCCCGGCGCCGCGTG AACGCCGAGCGCGCGGTGCGGCACCTGGGCCGGGCGGGCGTGCGCGCGAGCGTGCTGCGCATTCCCGGCATCTATGCGCC CGATCGCGAGGGCGGCACGCCCGAGGCACGGCTGCGCCGCGGCACGCCCGCGCTGGTGCGCGAGGACGACGTGCATACCA ATCACATCCATGCCGACGACCTCGCCCGCGCGTGCGTAGCCGCCCTGTGGCGGGGGCGTGCGCAGCGCATCTATCACGTA AGCGACGCGAGTAGTCTGAAGATGGGCGATTACTTCGACCTGGCCGCAGACCTGTACGGCCTGCCGCGCCCGCGCAGGAT CACGCGCGCCCAGGCCGGCGAAGAACTCTCGCCGATGCTGCTCAGCTTCATGAGCGAATCGCGCCGGCTCGATGCCACGC GGCTCGCGAAGGAATTGCGGGTGCGGCTGCGGTATCCGACCGTGGCCGAGGGGTTGCGCAGCGCTTAA
Upstream 100 bases:
>100_bases CCGCTGGGCTGCACGGTGATCTGGTGGGAGGCTGCGGCCGTCGCTGCGGTGTTCATGGGGTCGTTATCCTTGCGTGTCTC TTCGTTGCCGGATCTGGATT
Downstream 100 bases:
>100_bases CGGGGATAGATGTTCCCGTTGCCGTCATAGCACCGGAACACGTTGCACTGCGTGCCCGGCGGCTTGGGCACGGGCACGGC CGGCTGCACGACCACGGGAT
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: Oxidoreductase Protein; Nucleoside-Diphosphate-Sugar Epimerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerases; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase; Epimerase; NAD Dependent Epimerase/Dehydratase Family Protein
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MPSNLNPLGALPARFRRERVLVVGCGDVGLRAVRALQAGQGAPRPRVLALTSTPARMAGLRAAGTVPLVGDLDDVRTLRR LAGLATRVLHLAPPPGERDAGTAWWTDPRTVALARVLRLRSLPRALVYGSTSGVYGDCGGARVPETRPVAPATPRARRRV NAERAVRHLGRAGVRASVLRIPGIYAPDREGGTPEARLRRGTPALVREDDVHTNHIHADDLARACVAALWRGRAQRIYHV SDASSLKMGDYFDLAADLYGLPRPRRITRAQAGEELSPMLLSFMSESRRLDATRLAKELRVRLRYPTVAEGLRSA
Sequences:
>Translated_315_residues MPSNLNPLGALPARFRRERVLVVGCGDVGLRAVRALQAGQGAPRPRVLALTSTPARMAGLRAAGTVPLVGDLDDVRTLRR LAGLATRVLHLAPPPGERDAGTAWWTDPRTVALARVLRLRSLPRALVYGSTSGVYGDCGGARVPETRPVAPATPRARRRV NAERAVRHLGRAGVRASVLRIPGIYAPDREGGTPEARLRRGTPALVREDDVHTNHIHADDLARACVAALWRGRAQRIYHV SDASSLKMGDYFDLAADLYGLPRPRRITRAQAGEELSPMLLSFMSESRRLDATRLAKELRVRLRYPTVAEGLRSA >Mature_314_residues PSNLNPLGALPARFRRERVLVVGCGDVGLRAVRALQAGQGAPRPRVLALTSTPARMAGLRAAGTVPLVGDLDDVRTLRRL AGLATRVLHLAPPPGERDAGTAWWTDPRTVALARVLRLRSLPRALVYGSTSGVYGDCGGARVPETRPVAPATPRARRRVN AERAVRHLGRAGVRASVLRIPGIYAPDREGGTPEARLRRGTPALVREDDVHTNHIHADDLARACVAALWRGRAQRIYHVS DASSLKMGDYFDLAADLYGLPRPRRITRAQAGEELSPMLLSFMSESRRLDATRLAKELRVRLRYPTVAEGLRSA
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34267; Mature: 34136
Theoretical pI: Translated: 11.95; Mature: 11.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSNLNPLGALPARFRRERVLVVGCGDVGLRAVRALQAGQGAPRPRVLALTSTPARMAGL CCCCCCCCCCCHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCC RAAGTVPLVGDLDDVRTLRRLAGLATRVLHLAPPPGERDAGTAWWTDPRTVALARVLRLR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHHH SLPRALVYGSTSGVYGDCGGARVPETRPVAPATPRARRRVNAERAVRHLGRAGVRASVLR HCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCHHHHHEE IPGIYAPDREGGTPEARLRRGTPALVREDDVHTNHIHADDLARACVAALWRGRAQRIYHV CCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCHHEEEEE SDASSLKMGDYFDLAADLYGLPRPRRITRAQAGEELSPMLLSFMSESRRLDATRLAKELR CCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHH VRLRYPTVAEGLRSA HHHCCCHHHHHHHCC >Mature Secondary Structure PSNLNPLGALPARFRRERVLVVGCGDVGLRAVRALQAGQGAPRPRVLALTSTPARMAGL CCCCCCCCCCHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCC RAAGTVPLVGDLDDVRTLRRLAGLATRVLHLAPPPGERDAGTAWWTDPRTVALARVLRLR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHHH SLPRALVYGSTSGVYGDCGGARVPETRPVAPATPRARRRVNAERAVRHLGRAGVRASVLR HCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCHHHHHEE IPGIYAPDREGGTPEARLRRGTPALVREDDVHTNHIHADDLARACVAALWRGRAQRIYHV CCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCHHEEEEE SDASSLKMGDYFDLAADLYGLPRPRRITRAQAGEELSPMLLSFMSESRRLDATRLAKELR CCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHH VRLRYPTVAEGLRSA HHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA