| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is yhjQ [H]
Identifier: 120610656
GI number: 120610656
Start: 2145754
End: 2146101
Strand: Direct
Name: yhjQ [H]
Synonym: Aave_1976
Alternate gene names: 120610656
Gene position: 2145754-2146101 (Clockwise)
Preceding gene: 120610654
Following gene: 120610658
Centisome position: 40.09
GC content: 68.1
Gene sequence:
>348_bases ATGCAGATTTCCCAGGACACGCTTCCCCCTTCCCGGTACGCGGACTGCATCCGCGCCTGCAACGACTGCGCCGATGCCTG CAACTACTGCGCGGCAGCCTGCCTGCGCGAGCCGGATCCGCGCCATATGGTGCGCTGCATCATGCTCGACATGGATTGCG CGGACATCTGCCGCATGGCCGCAGCGGCGATGTCCCGCGAGAGCGCGCATGCCTATGAGATCTGCGCGCTGTGCGCCCGC CTGTGCGACAGCTGCGCCAACGAATGCAGCCGCCACGACATGGCGCACTGCCAGGCCTGCGCCGCCATGTGCCGGCGCTG CGCGGAACTCTGCCGCACGATGGGCTGA
Upstream 100 bases:
>100_bases AGAAGGCATCGGGGTTTCGATGCCCCTGGCAGCAAGCCGGCGGGTTGCCCCATCCACCTGTTCAGCCGGCCGTGGCCGGC GCCGTTTCACGGAGATTCCC
Downstream 100 bases:
>100_bases ACCTGGCTTCCAGTCCGGCCGGCCCGGGCCCTGCCGGGACGCGCGCCGTTCAGGAGGCGACGGTGCCGCCGTGCTTGTCC GCCTCGGACGTGAAGGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MQISQDTLPPSRYADCIRACNDCADACNYCAAACLREPDPRHMVRCIMLDMDCADICRMAAAAMSRESAHAYEICALCAR LCDSCANECSRHDMAHCQACAAMCRRCAELCRTMG
Sequences:
>Translated_115_residues MQISQDTLPPSRYADCIRACNDCADACNYCAAACLREPDPRHMVRCIMLDMDCADICRMAAAAMSRESAHAYEICALCAR LCDSCANECSRHDMAHCQACAAMCRRCAELCRTMG >Mature_115_residues MQISQDTLPPSRYADCIRACNDCADACNYCAAACLREPDPRHMVRCIMLDMDCADICRMAAAAMSRESAHAYEICALCAR LCDSCANECSRHDMAHCQACAAMCRRCAELCRTMG
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005560 [H]
Pfam domain/function: PF03860 DUF326 [H]
EC number: NA
Molecular weight: Translated: 12672; Mature: 12672
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
16.5 %Cys (Translated Protein) 7.8 %Met (Translated Protein) 24.3 %Cys+Met (Translated Protein) 16.5 %Cys (Mature Protein) 7.8 %Met (Mature Protein) 24.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQISQDTLPPSRYADCIRACNDCADACNYCAAACLREPDPRHMVRCIMLDMDCADICRMA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH AAAMSRESAHAYEICALCARLCDSCANECSRHDMAHCQACAAMCRRCAELCRTMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQISQDTLPPSRYADCIRACNDCADACNYCAAACLREPDPRHMVRCIMLDMDCADICRMA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH AAAMSRESAHAYEICALCARLCDSCANECSRHDMAHCQACAAMCRRCAELCRTMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]