Click here to switch to the map view.

The map label for this gene is 120610597

Identifier: 120610597

GI number: 120610597

Start: 2076825

End: 2077355

Strand: Reverse

Name: 120610597

Synonym: Aave_1917

Alternate gene names: NA

Gene position: 2077355-2076825 (Counterclockwise)

Preceding gene: 120610598

Following gene: 120610594

Centisome position: 38.81

GC content: 64.41

Gene sequence:

>531_bases
ATGGCAACCGAACCATATCTCGGCGAAATCAGCATGTTTGCCGGCAATTTCCCCCCCAAGGGCTGGGCGTTCTGCCAGGG
GCAGATCCTGCCCATCGCACAGAACAGCGCGCTTTTTGCACTGCTGGGCACTACCTACGGCGGCAACGGCCAGACGACCT
TCGCGCTGCCCGACCTGCGCGGGCGCGTCCCGCTGGGCCAGGGGCAGGGACCGGGACTGCAGCCCTATAGCCAGGGTCAG
GTCGGTGGACAGGAGACGGTGACACTGCAGGGCAATCAAATGCCCATGCACACCCACACGACATCCGTCTCCGTGAGCAG
CAACGCCGGCAACTCCGCGGCACCCAACGGCCGCTACCTGGCTGCTTCCGACCAGCGCAATGACCAGTACACCGACCAGA
GCGGCAATGGCAGCCTGGCCGGCGTCACGACCGGCTTCGCGGGGAACAGCCTGCCCCACGAGAACATGCAGCCCTACCTC
TGCATCAACTTCATCATCGCCCTGGAAGGCGTTTACCCGTCACGCAACTGA

Upstream 100 bases:

>100_bases
CTTGCCGGGCTCGCCCGAACTGGCGCTTTCAAACCTACGCCCGCGCCTGCGCAGCGGCTGGACCAACCCTTACCTCGTGA
CCTGACGAAAGACACAAGCC

Downstream 100 bases:

>100_bases
TCGGCCGGGCTTCGGGACCCGGCCGCCGCGCGGCGCGTCAGTCCACCACCGTCAGCTTGGCCACGGACAGCGCCAGCCAC
TTGGTGCCGTGCCGCGGGAA

Product: phage tail collar domain-containing protein

Products: NA

Alternate protein names: Phage Tail Collar; Phage Tail Collar Domain-Containing Protein; Tail Collar Domain-Containing Protein; Microcystin Dependent Protein; Microcystin-Dependent Protein; Phage Tail Collar Domain Protein; Phage Tail Collar Domain Family; Microcystin Dependent Protein MdpB; Cell Wall/Surface Repeat Protein; Microcystin Dependent; Phenylacrylic Acid Decarboxylase

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MATEPYLGEISMFAGNFPPKGWAFCQGQILPIAQNSALFALLGTTYGGNGQTTFALPDLRGRVPLGQGQGPGLQPYSQGQ
VGGQETVTLQGNQMPMHTHTTSVSVSSNAGNSAAPNGRYLAASDQRNDQYTDQSGNGSLAGVTTGFAGNSLPHENMQPYL
CINFIIALEGVYPSRN

Sequences:

>Translated_176_residues
MATEPYLGEISMFAGNFPPKGWAFCQGQILPIAQNSALFALLGTTYGGNGQTTFALPDLRGRVPLGQGQGPGLQPYSQGQ
VGGQETVTLQGNQMPMHTHTTSVSVSSNAGNSAAPNGRYLAASDQRNDQYTDQSGNGSLAGVTTGFAGNSLPHENMQPYL
CINFIIALEGVYPSRN
>Mature_175_residues
ATEPYLGEISMFAGNFPPKGWAFCQGQILPIAQNSALFALLGTTYGGNGQTTFALPDLRGRVPLGQGQGPGLQPYSQGQV
GGQETVTLQGNQMPMHTHTTSVSVSSNAGNSAAPNGRYLAASDQRNDQYTDQSGNGSLAGVTTGFAGNSLPHENMQPYLC
INFIIALEGVYPSRN

Specific function: Unknown

COG id: COG4675

COG function: function code S; Microcystin-dependent protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18471; Mature: 18340

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATEPYLGEISMFAGNFPPKGWAFCQGQILPIAQNSALFALLGTTYGGNGQTTFALPDLR
CCCCCCCCEEEEEECCCCCCCEEEECCEEEEEECCCEEEEEEECEECCCCEEEEECCCCC
GRVPLGQGQGPGLQPYSQGQVGGQETVTLQGNQMPMHTHTTSVSVSSNAGNSAAPNGRYL
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCEEEEEECCCCCCCCCCCCEE
AASDQRNDQYTDQSGNGSLAGVTTGFAGNSLPHENMQPYLCINFIIALEGVYPSRN
EECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCC
>Mature Secondary Structure 
ATEPYLGEISMFAGNFPPKGWAFCQGQILPIAQNSALFALLGTTYGGNGQTTFALPDLR
CCCCCCCEEEEEECCCCCCCEEEECCEEEEEECCCEEEEEEECEECCCCEEEEECCCCC
GRVPLGQGQGPGLQPYSQGQVGGQETVTLQGNQMPMHTHTTSVSVSSNAGNSAAPNGRYL
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCEEEEEECCCCCCCCCCCCEE
AASDQRNDQYTDQSGNGSLAGVTTGFAGNSLPHENMQPYLCINFIIALEGVYPSRN
EECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA