| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610598
Identifier: 120610598
GI number: 120610598
Start: 2077371
End: 2078456
Strand: Reverse
Name: 120610598
Synonym: Aave_1918
Alternate gene names: NA
Gene position: 2078456-2077371 (Counterclockwise)
Preceding gene: 120610599
Following gene: 120610597
Centisome position: 38.83
GC content: 73.2
Gene sequence:
>1086_bases ATGACCCTTGCGACCCCCACCCTCGCGCGGCTCGGCCGCCGCGGCTTCCTCGGGGCCTCGGCCTCCACGGCCGCAGCCGC CGCCACGGCAAGCGCACCGGCAGTTGTCCTGGCGGCCGCCTCCGCGGGAACCGTCGGGCCATCCGCCTCCGCGGCGCAAC GCACGGTCGGCGTGCTGCTGCCGGAATCGTCCCGCTACCCCACGCTGCCCGCAGAATTCCTCGCGGGCCTGAAAGCCGGG GCCGCGGCGTCCGGCCTGCCTTCTCCGCGCTGGCTGCCCCTGCCCTACGGGCGCAGCGTGCGTTCGGCGCTGCGGCAGGC GCGCGCCACCGTGGAAACCGGCACCGTGGACGCCCTGGCGGGATGGCTGCCCATGGAAACCGCCATGGAACTCTCGCCGC TGTTGCAGCAGCACCGCGTGCCCTTCCTCGCGAGCGACACGGGCGCCGACCGGCTTCCCGGCCATCTTGCTGCACGCTCG CCCTGGCTCGTTCCGCACACCCTTGCGCTGTGGCAGTCCTGCGCCTTCCTGGGGCAGGAGGCGCCACGCCGCTGGGGCAC CCGTGCGGTGCTCTGCATGGGCCTGCTCGAAAGCGGATACGACTTTCCGCACGAGTTCCGCGCGGCGTTCGAAGCCGCGG GGGGCACGGTGGCCGCCACCCATGTCTCGGGCCTGCCGGACGGCCGGCCCGAATTCGACGGGCTGCGGGCCGTGCTGAAG GGAACGTCCGCCGATTTCGTGGTGGCGTTGTACTCGGGCCGGCAGGCGGAGCGCTTCCGCGAGGCATGGCAGCGCCTCGG CATGGACCGCCAGCGGCCCCTGGTGGGCAGCCCGGTCGCGCTCGAAAGCCCCCTGTCCGCATCGTCCCCGGCGGCGGCCC TGCGGTTGGGAACCGAAGCCGGGGAGCGTTTCGCAAAATGGCAGGCTTCGGCTCTCTCCGGGCCTCTGGCCGCGGTGGCC AGGCTGCACGCCGGCCCTGCGCAAGGTCCGCAGAAAAACGCCTTGCCGGGCTCGCCCGAACTGGCGCTTTCAAACCTACG CCCGCGCCTGCGCAGCGGCTGGACCAACCCTTACCTCGTGACCTGA
Upstream 100 bases:
>100_bases CGCACCACGATGCCCTGGAACGGCTGCGTGCCCGGCAGGACCGCGGCGCCGCGGCGAACAGCGTCGAGGCCGGCGCGCGT GCCGAAGGAGCGACACTCCC
Downstream 100 bases:
>100_bases CGAAAGACACAAGCCATGGCAACCGAACCATATCTCGGCGAAATCAGCATGTTTGCCGGCAATTTCCCCCCCAAGGGCTG GGCGTTCTGCCAGGGGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MTLATPTLARLGRRGFLGASASTAAAAATASAPAVVLAAASAGTVGPSASAAQRTVGVLLPESSRYPTLPAEFLAGLKAG AAASGLPSPRWLPLPYGRSVRSALRQARATVETGTVDALAGWLPMETAMELSPLLQQHRVPFLASDTGADRLPGHLAARS PWLVPHTLALWQSCAFLGQEAPRRWGTRAVLCMGLLESGYDFPHEFRAAFEAAGGTVAATHVSGLPDGRPEFDGLRAVLK GTSADFVVALYSGRQAERFREAWQRLGMDRQRPLVGSPVALESPLSASSPAAALRLGTEAGERFAKWQASALSGPLAAVA RLHAGPAQGPQKNALPGSPELALSNLRPRLRSGWTNPYLVT
Sequences:
>Translated_361_residues MTLATPTLARLGRRGFLGASASTAAAAATASAPAVVLAAASAGTVGPSASAAQRTVGVLLPESSRYPTLPAEFLAGLKAG AAASGLPSPRWLPLPYGRSVRSALRQARATVETGTVDALAGWLPMETAMELSPLLQQHRVPFLASDTGADRLPGHLAARS PWLVPHTLALWQSCAFLGQEAPRRWGTRAVLCMGLLESGYDFPHEFRAAFEAAGGTVAATHVSGLPDGRPEFDGLRAVLK GTSADFVVALYSGRQAERFREAWQRLGMDRQRPLVGSPVALESPLSASSPAAALRLGTEAGERFAKWQASALSGPLAAVA RLHAGPAQGPQKNALPGSPELALSNLRPRLRSGWTNPYLVT >Mature_360_residues TLATPTLARLGRRGFLGASASTAAAAATASAPAVVLAAASAGTVGPSASAAQRTVGVLLPESSRYPTLPAEFLAGLKAGA AASGLPSPRWLPLPYGRSVRSALRQARATVETGTVDALAGWLPMETAMELSPLLQQHRVPFLASDTGADRLPGHLAARSP WLVPHTLALWQSCAFLGQEAPRRWGTRAVLCMGLLESGYDFPHEFRAAFEAAGGTVAATHVSGLPDGRPEFDGLRAVLKG TSADFVVALYSGRQAERFREAWQRLGMDRQRPLVGSPVALESPLSASSPAAALRLGTEAGERFAKWQASALSGPLAAVAR LHAGPAQGPQKNALPGSPELALSNLRPRLRSGWTNPYLVT
Specific function: Unknown
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37640; Mature: 37509
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLATPTLARLGRRGFLGASASTAAAAATASAPAVVLAAASAGTVGPSASAAQRTVGVLL CCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHEEEE PESSRYPTLPAEFLAGLKAGAAASGLPSPRWLPLPYGRSVRSALRQARATVETGTVDALA CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCHHHHH GWLPMETAMELSPLLQQHRVPFLASDTGADRLPGHLAARSPWLVPHTLALWQSCAFLGQE HHCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH APRRWGTRAVLCMGLLESGYDFPHEFRAAFEAAGGTVAATHVSGLPDGRPEFDGLRAVLK HHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHC GTSADFVVALYSGRQAERFREAWQRLGMDRQRPLVGSPVALESPLSASSPAAALRLGTEA CCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHH GERFAKWQASALSGPLAAVARLHAGPAQGPQKNALPGSPELALSNLRPRLRSGWTNPYLV HHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCEEE T C >Mature Secondary Structure TLATPTLARLGRRGFLGASASTAAAAATASAPAVVLAAASAGTVGPSASAAQRTVGVLL CCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHEEEE PESSRYPTLPAEFLAGLKAGAAASGLPSPRWLPLPYGRSVRSALRQARATVETGTVDALA CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCHHHHH GWLPMETAMELSPLLQQHRVPFLASDTGADRLPGHLAARSPWLVPHTLALWQSCAFLGQE HHCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH APRRWGTRAVLCMGLLESGYDFPHEFRAAFEAAGGTVAATHVSGLPDGRPEFDGLRAVLK HHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHC GTSADFVVALYSGRQAERFREAWQRLGMDRQRPLVGSPVALESPLSASSPAAALRLGTEA CCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHH GERFAKWQASALSGPLAAVARLHAGPAQGPQKNALPGSPELALSNLRPRLRSGWTNPYLV HHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHHCCCCCCEEE T C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA