| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is tas [H]
Identifier: 120610529
GI number: 120610529
Start: 2005758
End: 2006819
Strand: Direct
Name: tas [H]
Synonym: Aave_1849
Alternate gene names: 120610529
Gene position: 2005758-2006819 (Clockwise)
Preceding gene: 120610522
Following gene: 120610530
Centisome position: 37.47
GC content: 69.21
Gene sequence:
>1062_bases ATGCAAAAAGTCACGTTGGGCGCGAGCGCGCTCCAGGTCTCTCCCATCTGCCTCGGAACCATGACCTTCGGCGAGCAGGT GGGTGAAGCCGACGCCCATGCCATCCTCGACCGCTCGCTGGCGGCCGGCATCGACTTCATCGACACGGCCGAGATGTACG CCGTGCCGGCGCGTGCCGAAACCTATGGCGCGACCGAATCCATCATCGGCCGCTGGTTCGCGAAGAACCCGGGCGTCCGT AGCAAGGTCGTGCTCGCCACCAAGGTGGCCGGCCCTTCGCGCGGCATGCCCTGGGTGCGCGAAGGCAAGGGGATGACGGC GGCCGACATCCAGGCCTCCTGCGAGGGCAGCCTGCGCCGCCTGCAGACGGACGTGATCGACCTCTACCAGATCCACTGGC CCGAGCGCCACGTGCCCGCGTTCGGCACCCTGTACTACGACCCGCAGAAGGAAACCTCGGCGACGCCCATCCGGGAACAG CTCGAAGCCCTCGCAAAGCTGGTGCAGGCCGGCAAGGTGCGCTACGTGGGCCTGTCCAACGAGACGCCCTACGGCGTGCA CGAGTTCGTGCGTCTGGCCGAGGCGCACGGCCTGCCGCGCGTGGCGACGGTGCAGAACCCGTACTGCCTGATCAACCGCA CCTGGGACAACGCGATGGACGAAACCTGCCATCGCCTGGGCGTGTCGCTGCTGGCCTATTCGCCGCTGGGCTTCGGCCTG CTGACCGGAAAGTACGACCAGCACGCACCGACCGACCCGGGTGCGCCGCAGGGTGCGCGCATCGCCCGCTACGAGTCGGT GCGCAAGCAGCGCTGGGGCCGGCCCGAGGCGCTGGCCGCCGCGCGCCGCTACAACCAGCTCGCCCGCGACAACGGCCTGA CGCCCACGCAGATGGCGCTGGCCTTCTGCTACCGCAACTGGCGGGTGGCCAGCACCATCATCGGCGTGACCTCCCTGGCC CAGCTGGAGGAGGACATCGCCGCCTGGAACACGCAGCTTTCGCCCGAACTGCTGGCGGCCATCGACGCGATCCGCTGGGA CATCCGGGACCCCGCGCTGTGA
Upstream 100 bases:
>100_bases GCAGGACGAGGGATGGGCCTTCGGGCATGGGGCGGTCTGCGGCGTTCGTGAAAATCCATTATTCTCCCCAGCCACTTTCG CAGCTTGTAGGCCTTATTCC
Downstream 100 bases:
>100_bases GCCGCAAGGACCGGGCCGCCGCCCACGTCGGCGAGACGCCGGCCACGCAGTTCCTGCGCCGCCACGGCGTGGCGTTCACC GAGCACCCGTACGAGTACGT
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MQKVTLGASALQVSPICLGTMTFGEQVGEADAHAILDRSLAAGIDFIDTAEMYAVPARAETYGATESIIGRWFAKNPGVR SKVVLATKVAGPSRGMPWVREGKGMTAADIQASCEGSLRRLQTDVIDLYQIHWPERHVPAFGTLYYDPQKETSATPIREQ LEALAKLVQAGKVRYVGLSNETPYGVHEFVRLAEAHGLPRVATVQNPYCLINRTWDNAMDETCHRLGVSLLAYSPLGFGL LTGKYDQHAPTDPGAPQGARIARYESVRKQRWGRPEALAAARRYNQLARDNGLTPTQMALAFCYRNWRVASTIIGVTSLA QLEEDIAAWNTQLSPELLAAIDAIRWDIRDPAL
Sequences:
>Translated_353_residues MQKVTLGASALQVSPICLGTMTFGEQVGEADAHAILDRSLAAGIDFIDTAEMYAVPARAETYGATESIIGRWFAKNPGVR SKVVLATKVAGPSRGMPWVREGKGMTAADIQASCEGSLRRLQTDVIDLYQIHWPERHVPAFGTLYYDPQKETSATPIREQ LEALAKLVQAGKVRYVGLSNETPYGVHEFVRLAEAHGLPRVATVQNPYCLINRTWDNAMDETCHRLGVSLLAYSPLGFGL LTGKYDQHAPTDPGAPQGARIARYESVRKQRWGRPEALAAARRYNQLARDNGLTPTQMALAFCYRNWRVASTIIGVTSLA QLEEDIAAWNTQLSPELLAAIDAIRWDIRDPAL >Mature_353_residues MQKVTLGASALQVSPICLGTMTFGEQVGEADAHAILDRSLAAGIDFIDTAEMYAVPARAETYGATESIIGRWFAKNPGVR SKVVLATKVAGPSRGMPWVREGKGMTAADIQASCEGSLRRLQTDVIDLYQIHWPERHVPAFGTLYYDPQKETSATPIREQ LEALAKLVQAGKVRYVGLSNETPYGVHEFVRLAEAHGLPRVATVQNPYCLINRTWDNAMDETCHRLGVSLLAYSPLGFGL LTGKYDQHAPTDPGAPQGARIARYESVRKQRWGRPEALAAARRYNQLARDNGLTPTQMALAFCYRNWRVASTIIGVTSLA QLEEDIAAWNTQLSPELLAAIDAIRWDIRDPAL
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI4504825, Length=352, Percent_Identity=27.8409090909091, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI27436969, Length=352, Percent_Identity=27.8409090909091, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI27436962, Length=352, Percent_Identity=26.4204545454545, Blast_Score=109, Evalue=5e-24, Organism=Homo sapiens, GI27436964, Length=356, Percent_Identity=26.4044943820225, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI27436966, Length=352, Percent_Identity=26.4204545454545, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI27436971, Length=362, Percent_Identity=27.3480662983425, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI41327764, Length=337, Percent_Identity=28.7833827893175, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI223718702, Length=337, Percent_Identity=27.0029673590504, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI41152114, Length=336, Percent_Identity=26.4880952380952, Blast_Score=80, Evalue=3e-15, Organism=Escherichia coli, GI1789199, Length=353, Percent_Identity=45.3257790368272, Blast_Score=296, Evalue=2e-81, Organism=Escherichia coli, GI87081735, Length=354, Percent_Identity=32.2033898305085, Blast_Score=142, Evalue=2e-35, Organism=Escherichia coli, GI1789375, Length=351, Percent_Identity=30.1994301994302, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1788070, Length=352, Percent_Identity=28.9772727272727, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1788081, Length=236, Percent_Identity=29.6610169491525, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787674, Length=343, Percent_Identity=25.9475218658892, Blast_Score=76, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6325169, Length=365, Percent_Identity=23.5616438356164, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6323998, Length=359, Percent_Identity=24.7910863509749, Blast_Score=89, Evalue=9e-19, Organism=Saccharomyces cerevisiae, GI6319958, Length=325, Percent_Identity=25.2307692307692, Blast_Score=84, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6319951, Length=355, Percent_Identity=23.6619718309859, Blast_Score=77, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6322615, Length=272, Percent_Identity=22.0588235294118, Blast_Score=71, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38791; Mature: 38791
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKVTLGASALQVSPICLGTMTFGEQVGEADAHAILDRSLAAGIDFIDTAEMYAVPARAE CCEEECCCHHEEECCCEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHH TYGATESIIGRWFAKNPGVRSKVVLATKVAGPSRGMPWVREGKGMTAADIQASCEGSLRR HCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHCCCCCCHHHHHHHHHHHHHH LQTDVIDLYQIHWPERHVPAFGTLYYDPQKETSATPIREQLEALAKLVQAGKVRYVGLSN HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCC ETPYGVHEFVRLAEAHGLPRVATVQNPYCLINRTWDNAMDETCHRLGVSLLAYSPLGFGL CCCCCHHHHHHHHHHCCCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHH LTGKYDQHAPTDPGAPQGARIARYESVRKQRWGRPEALAAARRYNQLARDNGLTPTQMAL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHH AFCYRNWRVASTIIGVTSLAQLEEDIAAWNTQLSPELLAAIDAIRWDIRDPAL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQKVTLGASALQVSPICLGTMTFGEQVGEADAHAILDRSLAAGIDFIDTAEMYAVPARAE CCEEECCCHHEEECCCEEEHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHH TYGATESIIGRWFAKNPGVRSKVVLATKVAGPSRGMPWVREGKGMTAADIQASCEGSLRR HCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHCCCCCCHHHHHHHHHHHHHH LQTDVIDLYQIHWPERHVPAFGTLYYDPQKETSATPIREQLEALAKLVQAGKVRYVGLSN HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCC ETPYGVHEFVRLAEAHGLPRVATVQNPYCLINRTWDNAMDETCHRLGVSLLAYSPLGFGL CCCCCHHHHHHHHHHCCCCCEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHH LTGKYDQHAPTDPGAPQGARIARYESVRKQRWGRPEALAAARRYNQLARDNGLTPTQMAL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHH AFCYRNWRVASTIIGVTSLAQLEEDIAAWNTQLSPELLAAIDAIRWDIRDPAL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9560382; 9278503 [H]