| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610489
Identifier: 120610489
GI number: 120610489
Start: 1962537
End: 1963040
Strand: Reverse
Name: 120610489
Synonym: Aave_1808
Alternate gene names: NA
Gene position: 1963040-1962537 (Counterclockwise)
Preceding gene: 120610490
Following gene: 120610487
Centisome position: 36.67
GC content: 68.25
Gene sequence:
>504_bases GTGCACGCGCCACGTGCAGAGACCGCAAGCACCGCAACCTCGACGGGCACGGAACGGGTGCTTCTCGAACGCCCGGTGGT GGCCGAAGGCGACCGGAGCGCTCGCGGCCTGGATCGCAGTGGGTGGTTTGGTGGCAGCCTCCGGTCCGCTGCATGCGCAA ACACCGGACGCAGCAGAGCACGCTGGTCATGCACACCCTACGGACCACGGCGCTTCCGCAGATGCACCGGCAGGTGCTTC CGCATCTACTTCTGCTTCTGCACCTGCTTCACCCAGCACCGCGCTGAGCGAAGGCGAGGTCGTGCGCTGGAATGCCGCCA CCCGCCGCATCACATTGCGGCACGGCGAACTGCGCAACCTGGACATGCCGCCCATGACGATGGTGTCCGGGTGCGGGAGA CGCCTGCGGATGCGGTGTTGGTGCCGGGCGCGCGGGTGCGGTTTCTGGCGGAGCGTGATGGGGGCGGGCTTGTGGTGAGC CGCATCGAGCTTGTCGGGCGTTGA
Upstream 100 bases:
>100_bases CGCGTGTTCGCGAGCTATGCGGCGCGGGCGGGCAAGGCGCCGACATGAGGGGAGGAACGGCAATGATGACGAAGATGAGA GCGGCGATGTCGCCGGATAC
Downstream 100 bases:
>100_bases AAAATCCGGGAGATGGCTAAGCAAACAGCGGCCATTTCTGAAGCGCTTCGATGGCTACTGGTAACTCACGAAGACAGTAA AGCGGGAAGATCGTGTCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MHAPRAETASTATSTGTERVLLERPVVAEGDRSARGLDRSGWFGGSLRSAACANTGRSRARWSCTPYGPRRFRRCTGRCF RIYFCFCTCFTQHRAERRRGRALECRHPPHHIAARRTAQPGHAAHDDGVRVRETPADAVLVPGARVRFLAERDGGGLVVS RIELVGR
Sequences:
>Translated_167_residues MHAPRAETASTATSTGTERVLLERPVVAEGDRSARGLDRSGWFGGSLRSAACANTGRSRARWSCTPYGPRRFRRCTGRCF RIYFCFCTCFTQHRAERRRGRALECRHPPHHIAARRTAQPGHAAHDDGVRVRETPADAVLVPGARVRFLAERDGGGLVVS RIELVGR >Mature_167_residues MHAPRAETASTATSTGTERVLLERPVVAEGDRSARGLDRSGWFGGSLRSAACANTGRSRARWSCTPYGPRRFRRCTGRCF RIYFCFCTCFTQHRAERRRGRALECRHPPHHIAARRTAQPGHAAHDDGVRVRETPADAVLVPGARVRFLAERDGGGLVVS RIELVGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18510; Mature: 18510
Theoretical pI: Translated: 11.79; Mature: 11.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAPRAETASTATSTGTERVLLERPVVAEGDRSARGLDRSGWFGGSLRSAACANTGRSRA CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC RWSCTPYGPRRFRRCTGRCFRIYFCFCTCFTQHRAERRRGRALECRHPPHHIAARRTAQP EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHCCCCCC GHAAHDDGVRVRETPADAVLVPGARVRFLAERDGGGLVVSRIELVGR CCCCCCCCCEEEECCCCEEEECCCEEEEEEECCCCCEEEEEEEECCC >Mature Secondary Structure MHAPRAETASTATSTGTERVLLERPVVAEGDRSARGLDRSGWFGGSLRSAACANTGRSRA CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC RWSCTPYGPRRFRRCTGRCFRIYFCFCTCFTQHRAERRRGRALECRHPPHHIAARRTAQP EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHCCCCCC GHAAHDDGVRVRETPADAVLVPGARVRFLAERDGGGLVVSRIELVGR CCCCCCCCCEEEECCCCEEEECCCEEEEEEECCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA