Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120610490

Identifier: 120610490

GI number: 120610490

Start: 1963093

End: 1963710

Strand: Reverse

Name: 120610490

Synonym: Aave_1809

Alternate gene names: NA

Gene position: 1963710-1963093 (Counterclockwise)

Preceding gene: 120610491

Following gene: 120610489

Centisome position: 36.69

GC content: 70.23

Gene sequence:

>618_bases
ATGAACGAAAACCGCGTCGCCATCCGCTTCCCCCGCACTACCCCGGGCACTGACACCGCCGCCTCGGCGCTTGCATTCGC
ACCAGCGCCAGCGTCCTCCGCGCCCGGCACTACCCGCCGCGCCTGGCTGGGCACAGCACTCTGCGCCACCGCCGCTGCAG
CTACAACCCTCGCCGCCACTCTTCCCTCGCGCGCCCGCGCCGCCAGCCCCGCGCCCATCGCTATCGAAATCTGGAAAGAC
CCGAACTGCGGCTGCTGCAAGGACTGGGTGGACCACATGCAGGCCAACGGTTTCCAAGCCACCGTGCACGACACCGGCAA
CACGGCAGTGCGCGAAAAACTCGGCCTGCCCCAGAAGCTCGGCTCCTGCCATACCGCCCTCGTCGGCGGCTACCTGATCG
AAGGCCACGTGCCCGCCGCCGACGTGCAGCGACTGCTGCGCGAGAAGCCGCGTGCGCTGGGCTTGGCCGTACCCGGCATG
CCGGTGGGATCGCCCGGGATGGATGGGGCCTTCTACGGTGGACGCCGCGATGCGTACGACGTGCTGCTCGTGGCGCGCGA
TGGCAGCACGCGCGTGTTCGCGAGCTATGCGGCGCGGGCGGGCAAGGCGCCGACATGA

Upstream 100 bases:

>100_bases
CGGCCACTGACCGCGCTGCTTCCCTCCCGCCACGACAGCGCGTCACACCTTCATCGTCATCACCATCACACACATGCTTC
GCACGGAAAGGAAACCCGCC

Downstream 100 bases:

>100_bases
GGGGAGGAACGGCAATGATGACGAAGATGAGAGCGGCGATGTCGCCGGATACGTGCACGCGCCACGTGCAGAGACCGCAA
GCACCGCAACCTCGACGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MNENRVAIRFPRTTPGTDTAASALAFAPAPASSAPGTTRRAWLGTALCATAAAATTLAATLPSRARAASPAPIAIEIWKD
PNCGCCKDWVDHMQANGFQATVHDTGNTAVREKLGLPQKLGSCHTALVGGYLIEGHVPAADVQRLLREKPRALGLAVPGM
PVGSPGMDGAFYGGRRDAYDVLLVARDGSTRVFASYAARAGKAPT

Sequences:

>Translated_205_residues
MNENRVAIRFPRTTPGTDTAASALAFAPAPASSAPGTTRRAWLGTALCATAAAATTLAATLPSRARAASPAPIAIEIWKD
PNCGCCKDWVDHMQANGFQATVHDTGNTAVREKLGLPQKLGSCHTALVGGYLIEGHVPAADVQRLLREKPRALGLAVPGM
PVGSPGMDGAFYGGRRDAYDVLLVARDGSTRVFASYAARAGKAPT
>Mature_205_residues
MNENRVAIRFPRTTPGTDTAASALAFAPAPASSAPGTTRRAWLGTALCATAAAATTLAATLPSRARAASPAPIAIEIWKD
PNCGCCKDWVDHMQANGFQATVHDTGNTAVREKLGLPQKLGSCHTALVGGYLIEGHVPAADVQRLLREKPRALGLAVPGM
PVGSPGMDGAFYGGRRDAYDVLLVARDGSTRVFASYAARAGKAPT

Specific function: Unknown

COG id: COG3019

COG function: function code R; Predicted metal-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21237; Mature: 21237

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNENRVAIRFPRTTPGTDTAASALAFAPAPASSAPGTTRRAWLGTALCATAAAATTLAAT
CCCCCEEEEECCCCCCCCHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LPSRARAASPAPIAIEIWKDPNCGCCKDWVDHMQANGFQATVHDTGNTAVREKLGLPQKL
CCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCHHHH
GSCHTALVGGYLIEGHVPAADVQRLLREKPRALGLAVPGMPVGSPGMDGAFYGGRRDAYD
HHHHHHHHCCEEEECCCCHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCCCCEE
VLLVARDGSTRVFASYAARAGKAPT
EEEEEECCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MNENRVAIRFPRTTPGTDTAASALAFAPAPASSAPGTTRRAWLGTALCATAAAATTLAAT
CCCCCEEEEECCCCCCCCHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LPSRARAASPAPIAIEIWKDPNCGCCKDWVDHMQANGFQATVHDTGNTAVREKLGLPQKL
CCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCHHHH
GSCHTALVGGYLIEGHVPAADVQRLLREKPRALGLAVPGMPVGSPGMDGAFYGGRRDAYD
HHHHHHHHCCEEEECCCCHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCCCCEE
VLLVARDGSTRVFASYAARAGKAPT
EEEEEECCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA