| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610487
Identifier: 120610487
GI number: 120610487
Start: 1960527
End: 1961408
Strand: Reverse
Name: 120610487
Synonym: Aave_1806
Alternate gene names: NA
Gene position: 1961408-1960527 (Counterclockwise)
Preceding gene: 120610489
Following gene: 120610486
Centisome position: 36.64
GC content: 63.61
Gene sequence:
>882_bases ATGTCTTTCGCACGCACCCTCACCAATGTCGCCGTTGTCGCCTCGCTTGTCCTGGTCGCCGGCACTGCCCACGCTCAAAC CGCCCCCCTGACCCTGAAGGTCTACCACGCCGACGCTGACAGCTTCAATGTCAATTCGGTATTGGTTTCCGGCAAGACCG ATGCCGTCCTTCTGGATACGGGTTTCACCCGCGCAGATGCGCTGCGCATCGCGGCGATGGTCCTGGACAGCGGCAAGACG CTCAAGACCATCTACATCAGCCAGCCCGACCCCGACTACTACTTCGGCGTCAACATCTTGAAGTCGTATTTCCCCGATGC AAAGGTCGTCGCCACCGCGCCCACCGTCAAGAAGATCGAAGCCACGTTGCCGACCAAGCTCGCCTTCTGGCCGCCCAAGA TGGGTGCCAACGCTCCCAAGAGCGTCAGCGTGCCCGAGGTCCTGTCGGGCAACACGATCACGCTCGAAGACCAGGCCCTG GAGATCCGCGGTCTGGACGATCATTTGCCGCACCGGAGCTACGTTTGGATTCCGTCCATCCAATCCGTGGTCGGCGGCGT CAACGTCTTCGCCGGCCTGCACGTCTGGACCGCAGACGCGGCCAGTGCGGAAGACCGCGCCGCATGGTCGAAGAAGCTCG CTGACATCGCCGCGCTGCAACCCGCAGTGGTGGTCCCCGGCCACTCGGCGCCTGGCGAAGTCCAGGATGTCTCGCAAGTC GCCTTCACGCAGGCCTACCTGCAGCGCTGGGACACCGAGCTCAAGAAGGCCAACAACAGCGCCGAGCTGATCGGCGCCAT GAAGGCCGCATACCCCACAGCAGGCTTGGGCATCGCCCTGGACATCGGCGCCAGGGTCGGCAAGGGCGAGATGAAGTGGT GA
Upstream 100 bases:
>100_bases TCAGTTGACAAACATTCAATTAAACCGGAGTTTATCTCTGCGCAAGCGACTAATACAGTTCATCCCATCGCAGCAACGCT GCTTCATCCCGGAGATTCGA
Downstream 100 bases:
>100_bases GCGATGTAACCAAGGAGCGCGACATGGATAAGTTCACTCTCCCCGGCAAAGCAGTGGTCTACGTCATGGATGCCTACTGC GGCTGGTGCTGGGGCTTCTC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase Family Protein; Zn-Dependent Hydrolase; Beta-Lactamase Domain Protein; Beta-Lactamase-Like; Zn-Dependent Hydrolase Including Glyoxylase; Metallo-Beta-Lactamase; Beta-Lactamase Class B; Beta-Lactamase; Twin-Arginine Translocation Pathway Signal; Exported Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase Family Protein; Hydrolase; Metallo-Beta-Lactamase Protein; Signal Peptide; Beta-Lactamase-Like Protein
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSFARTLTNVAVVASLVLVAGTAHAQTAPLTLKVYHADADSFNVNSVLVSGKTDAVLLDTGFTRADALRIAAMVLDSGKT LKTIYISQPDPDYYFGVNILKSYFPDAKVVATAPTVKKIEATLPTKLAFWPPKMGANAPKSVSVPEVLSGNTITLEDQAL EIRGLDDHLPHRSYVWIPSIQSVVGGVNVFAGLHVWTADAASAEDRAAWSKKLADIAALQPAVVVPGHSAPGEVQDVSQV AFTQAYLQRWDTELKKANNSAELIGAMKAAYPTAGLGIALDIGARVGKGEMKW
Sequences:
>Translated_293_residues MSFARTLTNVAVVASLVLVAGTAHAQTAPLTLKVYHADADSFNVNSVLVSGKTDAVLLDTGFTRADALRIAAMVLDSGKT LKTIYISQPDPDYYFGVNILKSYFPDAKVVATAPTVKKIEATLPTKLAFWPPKMGANAPKSVSVPEVLSGNTITLEDQAL EIRGLDDHLPHRSYVWIPSIQSVVGGVNVFAGLHVWTADAASAEDRAAWSKKLADIAALQPAVVVPGHSAPGEVQDVSQV AFTQAYLQRWDTELKKANNSAELIGAMKAAYPTAGLGIALDIGARVGKGEMKW >Mature_292_residues SFARTLTNVAVVASLVLVAGTAHAQTAPLTLKVYHADADSFNVNSVLVSGKTDAVLLDTGFTRADALRIAAMVLDSGKTL KTIYISQPDPDYYFGVNILKSYFPDAKVVATAPTVKKIEATLPTKLAFWPPKMGANAPKSVSVPEVLSGNTITLEDQALE IRGLDDHLPHRSYVWIPSIQSVVGGVNVFAGLHVWTADAASAEDRAAWSKKLADIAALQPAVVVPGHSAPGEVQDVSQVA FTQAYLQRWDTELKKANNSAELIGAMKAAYPTAGLGIALDIGARVGKGEMKW
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31109; Mature: 30978
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: PS00136 SUBTILASE_ASP ; PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFARTLTNVAVVASLVLVAGTAHAQTAPLTLKVYHADADSFNVNSVLVSGKTDAVLLDT CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEC GFTRADALRIAAMVLDSGKTLKTIYISQPDPDYYFGVNILKSYFPDAKVVATAPTVKKIE CCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEHHHHHHHHCCCCEEEEECCCHHHHH ATLPTKLAFWPPKMGANAPKSVSVPEVLSGNTITLEDQALEIRGLDDHLPHRSYVWIPSI HCCCCEEEECCCCCCCCCCCCCCCCHHHCCCEEEEECCEEEEECCHHCCCCCEEEECCCH QSVVGGVNVFAGLHVWTADAASAEDRAAWSKKLADIAALQPAVVVPGHSAPGEVQDVSQV HHHHCHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHH AFTQAYLQRWDTELKKANNSAELIGAMKAAYPTAGLGIALDIGARVGKGEMKW HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure SFARTLTNVAVVASLVLVAGTAHAQTAPLTLKVYHADADSFNVNSVLVSGKTDAVLLDT CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEC GFTRADALRIAAMVLDSGKTLKTIYISQPDPDYYFGVNILKSYFPDAKVVATAPTVKKIE CCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEHHHHHHHHCCCCEEEEECCCHHHHH ATLPTKLAFWPPKMGANAPKSVSVPEVLSGNTITLEDQALEIRGLDDHLPHRSYVWIPSI HCCCCEEEECCCCCCCCCCCCCCCCHHHCCCEEEEECCEEEEECCHHCCCCCEEEECCCH QSVVGGVNVFAGLHVWTADAASAEDRAAWSKKLADIAALQPAVVVPGHSAPGEVQDVSQV HHHHCHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHH AFTQAYLQRWDTELKKANNSAELIGAMKAAYPTAGLGIALDIGARVGKGEMKW HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA