| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610393
Identifier: 120610393
GI number: 120610393
Start: 1865672
End: 1866259
Strand: Direct
Name: 120610393
Synonym: Aave_1710
Alternate gene names: NA
Gene position: 1865672-1866259 (Clockwise)
Preceding gene: 120610392
Following gene: 120610394
Centisome position: 34.85
GC content: 66.5
Gene sequence:
>588_bases ATGTTGAAAACACACGCAATCGCACGCGCGCTGGACCGCCAGCGCTTCGATGAGACGGAAGACGGGCTGTTGCTAGCCCA CGACCTGGGCATCAAGGCCTGCGGCGAGTACACCATTGCCGTGAACGGCGGGCCGGCCGAGGTCGAGCGCAACCGCATTC CCACCCAGGGGTTCAACTACTTGCTGTCGGCCGCGCTGGCTGGCGGCACGGTCCACCCGCAGTTCTACATCGCGCTTTTC TCCGGCGCGTACACGCCGACCGACGCGGTGACGGCGGCCACGTTCTCGGCAGCGGCTACCGAGATCACCAGCAACACGGA AGGCTACTCCGAGGGCCTGCGCCAACTGTGGGTGCCCGGCGCTGCAGCAAATGGCGTGATCGACGCCGTCGCAAACAAGG CGGTCTTCACGGTGGCCACCGCCACCTCGCTGACGGTGCGCGGCGCGGCTCTCCTGTCCGAATCCATCAAGGGCAGCACG TCGGGGACGCTGGTGTCGGTCGCGCGGTTCTCCAAGGACCGTGTGTATTTCGACGGCGACAAGGTCGAAATCGGCTACCG CATCCGGCTGCAGCCCCTGGCCGCCTGA
Upstream 100 bases:
>100_bases TGCTGCTGCGCGGCGGCATCCGTCAGGTTGTCACGCTCACGGCTTCCTCGCCTTCGCCGATCGTCGGCGTGGCTCTTGAC TCAACCAACGAGGGATACCC
Downstream 100 bases:
>100_bases CATGACCGACCGGCTTCCGTTCACGGCGCCAGGGCGCGCCACCTCTGGCAACGGCGATTCCCAGTCGCTCGATGCCGAGG CGCGCCGCCTGATGTTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MLKTHAIARALDRQRFDETEDGLLLAHDLGIKACGEYTIAVNGGPAEVERNRIPTQGFNYLLSAALAGGTVHPQFYIALF SGAYTPTDAVTAATFSAAATEITSNTEGYSEGLRQLWVPGAAANGVIDAVANKAVFTVATATSLTVRGAALLSESIKGST SGTLVSVARFSKDRVYFDGDKVEIGYRIRLQPLAA
Sequences:
>Translated_195_residues MLKTHAIARALDRQRFDETEDGLLLAHDLGIKACGEYTIAVNGGPAEVERNRIPTQGFNYLLSAALAGGTVHPQFYIALF SGAYTPTDAVTAATFSAAATEITSNTEGYSEGLRQLWVPGAAANGVIDAVANKAVFTVATATSLTVRGAALLSESIKGST SGTLVSVARFSKDRVYFDGDKVEIGYRIRLQPLAA >Mature_195_residues MLKTHAIARALDRQRFDETEDGLLLAHDLGIKACGEYTIAVNGGPAEVERNRIPTQGFNYLLSAALAGGTVHPQFYIALF SGAYTPTDAVTAATFSAAATEITSNTEGYSEGLRQLWVPGAAANGVIDAVANKAVFTVATATSLTVRGAALLSESIKGST SGTLVSVARFSKDRVYFDGDKVEIGYRIRLQPLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20543; Mature: 20543
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTHAIARALDRQRFDETEDGLLLAHDLGIKACGEYTIAVNGGPAEVERNRIPTQGFNY CCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCEEEEECCCCCHHHCCCCCCHHHHH LLSAALAGGTVHPQFYIALFSGAYTPTDAVTAATFSAAATEITSNTEGYSEGLRQLWVPG HHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC AAANGVIDAVANKAVFTVATATSLTVRGAALLSESIKGSTSGTLVSVARFSKDRVYFDGD CCCCHHHHHHCCCEEEEEEECCCEEHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCC KVEIGYRIRLQPLAA EEEEEEEEEEEEECC >Mature Secondary Structure MLKTHAIARALDRQRFDETEDGLLLAHDLGIKACGEYTIAVNGGPAEVERNRIPTQGFNY CCCHHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCEEEEECCCCCHHHCCCCCCHHHHH LLSAALAGGTVHPQFYIALFSGAYTPTDAVTAATFSAAATEITSNTEGYSEGLRQLWVPG HHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC AAANGVIDAVANKAVFTVATATSLTVRGAALLSESIKGSTSGTLVSVARFSKDRVYFDGD CCCCHHHHHHCCCEEEEEEECCCEEHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCC KVEIGYRIRLQPLAA EEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA