| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610392
Identifier: 120610392
GI number: 120610392
Start: 1864449
End: 1865678
Strand: Direct
Name: 120610392
Synonym: Aave_1709
Alternate gene names: NA
Gene position: 1864449-1865678 (Clockwise)
Preceding gene: 120610391
Following gene: 120610393
Centisome position: 34.83
GC content: 67.48
Gene sequence:
>1230_bases ATGGCGCGCATACCACTGCCGGTGCTGGGTATGGACCTGCTCTCCGACGAGGTGGAGATGCCGGCGGGAACCGTCCGCGA AGCAATCAACGTGGACATCGATCGCAGCGGACAGTTCCGACGGCGCGACGGTTACACGCCGGTGGCCGTGGGCACGGGCT TCACCCACGCACATGCCTTCGGCGGGAAACTTCTGGTGGTTCGCGGGGACGCGCTCCTGCAGGTGGACACCCGTACGTAC GCCAGCCTCATGGTCGCGCAGATCGGCCTGGGGCCCGTGGCCTTCACTGAGTACAACGGGCGCCTCTATGTCGTGTGCGC CAAAGGGCTGCTGGCCATGGATCCCGGTCGAGACTTGGCGACGCCCGCCGGCGTCCAACTGCCCGACGCGCTTCCGGAAG TACAGGCGCGGGATTCCGGAACGTTGACGCCGGGCCGCTACACGGTGGCCATCTCGCTGGTTGACGGCAATGGCGAGGAA TCCGCGGCGTGCATCGTCGGCCAGGCCGATACCTCGGCAGGGCTCAGGCTCACCGGCCTGACGGTGGCCCCAGGGTATCG CTACAGGGCGTATGTGACGCCTCCAGATGGTGACGTGCTCTACCTGGCCGAGGAGTTCGAGGCCCTGTCCGCTGACTATG CGCTCACCGTCTATCCGGGCGGCGCCCTTTGCGAAACCCTGGACTTGGCGCCCTTCCCGAGCGGGCACTTGGTTCGGGCC TACGCGGGGCGGATCTACGTGGCCTCCGGAGACACCCTATGGTTCTCGGAACCGCTTCGCCCGCACCTCATCGCTCCGCG CCGGGGCTTCGTCCGCTTCGTTGGCCGCATCCGCTTTGTTGAGCTGGTGGAAGGCGGCGCCTACGTCGGAGACAGCCGCG GGGTGTGGTGGCTGGGCGGTTCGGATCCTTCCGCCTGGACGCAGTCGCTCGCCTCGTCGGCCAAGGCCGTCCATTGTTCC TCTCTTCTCGTACCAGCCGATCAGCTTGCCGGCGATGGGCAGGGCGCTCAAGCCGTATGGCTGAGTGAGGAAGGGTACTT CGCCGGGGCCCCGGGCGGGGTCGCCCGACCGCTGCAGCCTGGCCGCATCAGGCTCTCGCCCGACATCGCCGGGCGGTCCG TTCTGCTGCTGCGCGGCGGCATCCGTCAGGTTGTCACGCTCACGGCTTCCTCGCCTTCGCCGATCGTCGGCGTGGCTCTT GACTCAACCAACGAGGGATACCCATGTTGA
Upstream 100 bases:
>100_bases TGACGGCTTCAAGCGGCGCATATGGGGCGATCGCATGGCATTCGGAGGGCGTGAGTCCGGCTTGGTGGCGCGACCTGCGG AATGCGAGGGAGGTGGCCTG
Downstream 100 bases:
>100_bases AAACACACGCAATCGCACGCGCGCTGGACCGCCAGCGCTTCGATGAGACGGAAGACGGGCTGTTGCTAGCCCACGACCTG GGCATCAAGGCCTGCGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MARIPLPVLGMDLLSDEVEMPAGTVREAINVDIDRSGQFRRRDGYTPVAVGTGFTHAHAFGGKLLVVRGDALLQVDTRTY ASLMVAQIGLGPVAFTEYNGRLYVVCAKGLLAMDPGRDLATPAGVQLPDALPEVQARDSGTLTPGRYTVAISLVDGNGEE SAACIVGQADTSAGLRLTGLTVAPGYRYRAYVTPPDGDVLYLAEEFEALSADYALTVYPGGALCETLDLAPFPSGHLVRA YAGRIYVASGDTLWFSEPLRPHLIAPRRGFVRFVGRIRFVELVEGGAYVGDSRGVWWLGGSDPSAWTQSLASSAKAVHCS SLLVPADQLAGDGQGAQAVWLSEEGYFAGAPGGVARPLQPGRIRLSPDIAGRSVLLLRGGIRQVVTLTASSPSPIVGVAL DSTNEGYPC
Sequences:
>Translated_409_residues MARIPLPVLGMDLLSDEVEMPAGTVREAINVDIDRSGQFRRRDGYTPVAVGTGFTHAHAFGGKLLVVRGDALLQVDTRTY ASLMVAQIGLGPVAFTEYNGRLYVVCAKGLLAMDPGRDLATPAGVQLPDALPEVQARDSGTLTPGRYTVAISLVDGNGEE SAACIVGQADTSAGLRLTGLTVAPGYRYRAYVTPPDGDVLYLAEEFEALSADYALTVYPGGALCETLDLAPFPSGHLVRA YAGRIYVASGDTLWFSEPLRPHLIAPRRGFVRFVGRIRFVELVEGGAYVGDSRGVWWLGGSDPSAWTQSLASSAKAVHCS SLLVPADQLAGDGQGAQAVWLSEEGYFAGAPGGVARPLQPGRIRLSPDIAGRSVLLLRGGIRQVVTLTASSPSPIVGVAL DSTNEGYPC >Mature_408_residues ARIPLPVLGMDLLSDEVEMPAGTVREAINVDIDRSGQFRRRDGYTPVAVGTGFTHAHAFGGKLLVVRGDALLQVDTRTYA SLMVAQIGLGPVAFTEYNGRLYVVCAKGLLAMDPGRDLATPAGVQLPDALPEVQARDSGTLTPGRYTVAISLVDGNGEES AACIVGQADTSAGLRLTGLTVAPGYRYRAYVTPPDGDVLYLAEEFEALSADYALTVYPGGALCETLDLAPFPSGHLVRAY AGRIYVASGDTLWFSEPLRPHLIAPRRGFVRFVGRIRFVELVEGGAYVGDSRGVWWLGGSDPSAWTQSLASSAKAVHCSS LLVPADQLAGDGQGAQAVWLSEEGYFAGAPGGVARPLQPGRIRLSPDIAGRSVLLLRGGIRQVVTLTASSPSPIVGVALD STNEGYPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43072; Mature: 42941
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIPLPVLGMDLLSDEVEMPAGTVREAINVDIDRSGQFRRRDGYTPVAVGTGFTHAHAF CCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEECCCCCCEEEECCCCCCHHHC GGKLLVVRGDALLQVDTRTYASLMVAQIGLGPVAFTEYNGRLYVVCAKGLLAMDPGRDLA CCEEEEEECCEEEEECCHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCEEEECCCCCCC TPAGVQLPDALPEVQARDSGTLTPGRYTVAISLVDGNGEESAACIVGQADTSAGLRLTGL CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCEEEEEE TVAPGYRYRAYVTPPDGDVLYLAEEFEALSADYALTVYPGGALCETLDLAPFPSGHLVRA EECCCCEEEEEEECCCCCEEEEEEHHHHCCCCEEEEEECCCHHHHEECCCCCCCCCEEEE YAGRIYVASGDTLWFSEPLRPHLIAPRRGFVRFVGRIRFVELVEGGAYVGDSRGVWWLGG EECEEEEECCCEEEECCCCCCCEECCCHHHHHHHHHEEEEEEECCCCEEECCCCEEEECC SDPSAWTQSLASSAKAVHCSSLLVPADQLAGDGQGAQAVWLSEEGYFAGAPGGVARPLQP CCHHHHHHHHHHCCCEEEEEEEECCHHHHCCCCCCCEEEEEECCCEEECCCCCCCCCCCC GRIRLSPDIAGRSVLLLRGGIRQVVTLTASSPSPIVGVALDSTNEGYPC CEEEECCCCCCCEEEEEECCCEEEEEEECCCCCCEEEEEEECCCCCCCC >Mature Secondary Structure ARIPLPVLGMDLLSDEVEMPAGTVREAINVDIDRSGQFRRRDGYTPVAVGTGFTHAHAF CCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEECCCCCCEEEECCCCCCHHHC GGKLLVVRGDALLQVDTRTYASLMVAQIGLGPVAFTEYNGRLYVVCAKGLLAMDPGRDLA CCEEEEEECCEEEEECCHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCEEEECCCCCCC TPAGVQLPDALPEVQARDSGTLTPGRYTVAISLVDGNGEESAACIVGQADTSAGLRLTGL CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCEEEEEE TVAPGYRYRAYVTPPDGDVLYLAEEFEALSADYALTVYPGGALCETLDLAPFPSGHLVRA EECCCCEEEEEEECCCCCEEEEEEHHHHCCCCEEEEEECCCHHHHEECCCCCCCCCEEEE YAGRIYVASGDTLWFSEPLRPHLIAPRRGFVRFVGRIRFVELVEGGAYVGDSRGVWWLGG EECEEEEECCCEEEECCCCCCCEECCCHHHHHHHHHEEEEEEECCCCEEECCCCEEEECC SDPSAWTQSLASSAKAVHCSSLLVPADQLAGDGQGAQAVWLSEEGYFAGAPGGVARPLQP CCHHHHHHHHHHCCCEEEEEEEECCHHHHCCCCCCCEEEEEECCCEEECCCCCCCCCCCC GRIRLSPDIAGRSVLLLRGGIRQVVTLTASSPSPIVGVALDSTNEGYPC CEEEECCCCCCCEEEEEECCCEEEEEEECCCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA