| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610394
Identifier: 120610394
GI number: 120610394
Start: 1866261
End: 1869002
Strand: Direct
Name: 120610394
Synonym: Aave_1711
Alternate gene names: NA
Gene position: 1866261-1869002 (Clockwise)
Preceding gene: 120610393
Following gene: 120610395
Centisome position: 34.87
GC content: 65.1
Gene sequence:
>2742_bases ATGACCGACCGGCTTCCGTTCACGGCGCCAGGGCGCGCCACCTCTGGCAACGGCGATTCCCAGTCGCTCGATGCCGAGGC GCGCCGCCTGATGTTCCAGGCGAAGCTGCTCGCAGGTGCGTCGGGCGTGCCTGTGCTGGGCATGCGGCGTGAGATGGGAG ACGGCTCAGTGGTCACGGCACAGCTTGCGGGCCCCGTGGAGCGGGTGACCATGCGCGCGGACCGGCAGGAGGTGCCGCAG GAGGAGCCAATCGGCGCCATCTCGCGTCTCGTGTGGTTCCCGGAGGGCTTCGTCATCACCCCGCGCTCACCCGCCGCGCC GTTGGGCTATGGGATGCCGAACACGTCGGATGGTTTGGGCACGCCCTTGGGCCCTCTGCGGCAGGTCATCATCAACCGGT TCAAGGACAACCAGTACCCGGATGCCGTGCTTCGCGCCGCTGGCGGCAAGGTGAGCGCAACGCACCGCAACTACTGCGCG GCGCCGCTCTTCTACATGGACTGGGAGGCGCGCGGCGAGTTCGTGATCGGCGCGCGCGTGGATGGCCGCGTGAAGCCGCA GTTCCGTGCCCGCTGGCAGCGCAATTACAGTGAGGCCGAAACCGCCACGTGGTATTGCCACCGACCCACCAGCGCGGCAC GCGCCGAGCTGGACGTCCACAAGTCGATCCGCGAAGAAACCAACCTCATCCGCGCGGCTGCTGGACGCGGTGAGGTGCAC CCGCCATTGCGCGGCTACGAGGGCATGCTGTCCGAGCTGGTGCTGTACCTGAACAAGACAGCCAAGGTGCTGGGGCACGA CAGCCGGAGCTTCAGGGATGGGCATTTGAGCTTTGAGCAAGACCGATATGCAACCCGGGCCGGGCTGCGCGGATCGGTTG GAATCCTCACGCCCACATCGCCTGCTGGCGAGAACATCTTTCTGACGACTGCTACCGACGTGCAATCCGCCCGCTTCGGT GCGGAAGCCGTGGAGTGGTGGCGCGGCTCTCCTGCCCACTATGCCAACATGGTTCGGGACTGGGCGGCGGATGAGATGTG GCCCACGCTCGACAGCGCAACGCGCAACAACGCAGGCGTGGGCATTGAGAAACGCCAGGTGCCTCCGTACTCGCTCGACA GTGAATTTCAGGATCTCGTCCCGCCCGTGGTGGGCTCCGAGGCCTCGCAAATCTTCATGGGCATGGAGAACTTCGTTTTG CCTTCCGTGCCGGGTCAGGAGGGGCCGGAAGATGAGAGAGTCGGGATCGAATCGGTTTTCTACACCCAGGGCCACGGCTA CTTCATACCGACCATCGATCTGCATCTTGGCAGCGGAATGGCGCGCGTGCGGTTCAAGGGACGCGCGATCGAGGTCCATG ACAACCTGTCCGAGCTGTTCACCCCACTCGCGGCCCGGTTCCAAACCGCGAGCGGCCGGCGCATGCTCAGGGTCGCCGGC CTCGCCCGGCAGAAAGCTGCAGAGGGGCCGCAGTTCATCGTGCTCTTTCAGGGGCTGGCCCACGACTTCTACGCCACGCG GCAGGAGCTTGGACGCTTCCGCCTGCCCGACAACCTGGGCCAAGTGTCCTACCCGAAGTTCTCCGAATCGGGCGCGCGAA TGGTGATCTCGTACACCGAGGCGGTTTCGGAAGACCAGATCATCACCGAGTCGCATTTCGGCACCTACGCAGCCGATGGA GGCGTCGGCGACCCGGTGACGACGGCAACGACGGATGCGGAGCGGGTATGGGGAGAGGTGCTGCACTTCGTGGAGTGGCA CGGCGGCACATTTGCCGAGGTGCTGCAGCAGAGCCTGGATGTGACGGTAGGGTGGGGCAGCACCTGGATGCGCAGGGCCT GCCGCGGTTCGTACCGCCTCTTCGCCGACTATCAGGGCGAGTCTATTGTGTACGCATCGGTGGAGGTGGATTCCGAGCTG TTCCAGGATGAACCCGGAGCCGGCACCACGACCGGGCCGGCGACCTATTACGAACGCACCCGCCTGCGCAGCACCCTCGT GTTCCCGGACGGGACGCGACTGCCCGTCACCAACACCGACACGGATGAGAGCTTCACGGTGTCGGGCTACTTCTGCCACC TTCTGTATTTGGACATCTTGCGCCCCGTGCGGACCGCCCTGATGCGATACGAAATGCAGGGCACCGGCTACGACGTAGGA GGACTCAATCCCCGCACCTGCAGCATGTCCATCGTCATCCAGGGGCAGACTGTGAAGTCCAAGGAAAACGTGCTCTTCCC CACGGGGGACGAGGAGGCGGCCGGCCGAGCCTCACAGGGTTGGACGAACACGAACATAGGCGTGGGCTTCACCAGCTTCC TGCCAATGGCGGTTCTCCGCTCCGCTGACGGCACCCGCCGCATCCGGGTGAACCCCGCAGGGGAGACCGCCGTGGCGGCC GTGACGCATAAAGCGAGCCTCGTCGGGATGTGCGCCTATAGCGCAGACGTTCAGATGCACGGGGCCACGTTCAGCCAGCG CCACAGCCAAGTCGGCACGAGCGTATCGCATGGCGTGCCCATGTCGCTCGGCAGCCAGGCCTCCGTCGATTTCCTGGCAG CGTTCCATCGGGACGAGTTCGTCTATGCCGGCAAGGTGAGCAACACCATTCGGGTGGGGCCGGACTATGGCACCGCCTGG TACGGCGATGACGAGTTCATCCGCCACTCTTCGCTTCCCCTGGAGCAGATCACGGGCATTCCGGATCTCGCCCAGAACAT CTTGCCCATCGGAGTGCTATGA
Upstream 100 bases:
>100_bases CTGGTGTCGGTCGCGCGGTTCTCCAAGGACCGTGTGTATTTCGACGGCGACAAGGTCGAAATCGGCTACCGCATCCGGCT GCAGCCCCTGGCCGCCTGAC
Downstream 100 bases:
>100_bases CCATTCGACTCAGCTCGGGCCTGCGCCGCGCCATCGTCACCAACTACGGGTTGGGGTCGATGCTGCAGTACGGGCACATC CGCATCTACAGCGGCTCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 913; Mature: 912
Protein sequence:
>913_residues MTDRLPFTAPGRATSGNGDSQSLDAEARRLMFQAKLLAGASGVPVLGMRREMGDGSVVTAQLAGPVERVTMRADRQEVPQ EEPIGAISRLVWFPEGFVITPRSPAAPLGYGMPNTSDGLGTPLGPLRQVIINRFKDNQYPDAVLRAAGGKVSATHRNYCA APLFYMDWEARGEFVIGARVDGRVKPQFRARWQRNYSEAETATWYCHRPTSAARAELDVHKSIREETNLIRAAAGRGEVH PPLRGYEGMLSELVLYLNKTAKVLGHDSRSFRDGHLSFEQDRYATRAGLRGSVGILTPTSPAGENIFLTTATDVQSARFG AEAVEWWRGSPAHYANMVRDWAADEMWPTLDSATRNNAGVGIEKRQVPPYSLDSEFQDLVPPVVGSEASQIFMGMENFVL PSVPGQEGPEDERVGIESVFYTQGHGYFIPTIDLHLGSGMARVRFKGRAIEVHDNLSELFTPLAARFQTASGRRMLRVAG LARQKAAEGPQFIVLFQGLAHDFYATRQELGRFRLPDNLGQVSYPKFSESGARMVISYTEAVSEDQIITESHFGTYAADG GVGDPVTTATTDAERVWGEVLHFVEWHGGTFAEVLQQSLDVTVGWGSTWMRRACRGSYRLFADYQGESIVYASVEVDSEL FQDEPGAGTTTGPATYYERTRLRSTLVFPDGTRLPVTNTDTDESFTVSGYFCHLLYLDILRPVRTALMRYEMQGTGYDVG GLNPRTCSMSIVIQGQTVKSKENVLFPTGDEEAAGRASQGWTNTNIGVGFTSFLPMAVLRSADGTRRIRVNPAGETAVAA VTHKASLVGMCAYSADVQMHGATFSQRHSQVGTSVSHGVPMSLGSQASVDFLAAFHRDEFVYAGKVSNTIRVGPDYGTAW YGDDEFIRHSSLPLEQITGIPDLAQNILPIGVL
Sequences:
>Translated_913_residues MTDRLPFTAPGRATSGNGDSQSLDAEARRLMFQAKLLAGASGVPVLGMRREMGDGSVVTAQLAGPVERVTMRADRQEVPQ EEPIGAISRLVWFPEGFVITPRSPAAPLGYGMPNTSDGLGTPLGPLRQVIINRFKDNQYPDAVLRAAGGKVSATHRNYCA APLFYMDWEARGEFVIGARVDGRVKPQFRARWQRNYSEAETATWYCHRPTSAARAELDVHKSIREETNLIRAAAGRGEVH PPLRGYEGMLSELVLYLNKTAKVLGHDSRSFRDGHLSFEQDRYATRAGLRGSVGILTPTSPAGENIFLTTATDVQSARFG AEAVEWWRGSPAHYANMVRDWAADEMWPTLDSATRNNAGVGIEKRQVPPYSLDSEFQDLVPPVVGSEASQIFMGMENFVL PSVPGQEGPEDERVGIESVFYTQGHGYFIPTIDLHLGSGMARVRFKGRAIEVHDNLSELFTPLAARFQTASGRRMLRVAG LARQKAAEGPQFIVLFQGLAHDFYATRQELGRFRLPDNLGQVSYPKFSESGARMVISYTEAVSEDQIITESHFGTYAADG GVGDPVTTATTDAERVWGEVLHFVEWHGGTFAEVLQQSLDVTVGWGSTWMRRACRGSYRLFADYQGESIVYASVEVDSEL FQDEPGAGTTTGPATYYERTRLRSTLVFPDGTRLPVTNTDTDESFTVSGYFCHLLYLDILRPVRTALMRYEMQGTGYDVG GLNPRTCSMSIVIQGQTVKSKENVLFPTGDEEAAGRASQGWTNTNIGVGFTSFLPMAVLRSADGTRRIRVNPAGETAVAA VTHKASLVGMCAYSADVQMHGATFSQRHSQVGTSVSHGVPMSLGSQASVDFLAAFHRDEFVYAGKVSNTIRVGPDYGTAW YGDDEFIRHSSLPLEQITGIPDLAQNILPIGVL >Mature_912_residues TDRLPFTAPGRATSGNGDSQSLDAEARRLMFQAKLLAGASGVPVLGMRREMGDGSVVTAQLAGPVERVTMRADRQEVPQE EPIGAISRLVWFPEGFVITPRSPAAPLGYGMPNTSDGLGTPLGPLRQVIINRFKDNQYPDAVLRAAGGKVSATHRNYCAA PLFYMDWEARGEFVIGARVDGRVKPQFRARWQRNYSEAETATWYCHRPTSAARAELDVHKSIREETNLIRAAAGRGEVHP PLRGYEGMLSELVLYLNKTAKVLGHDSRSFRDGHLSFEQDRYATRAGLRGSVGILTPTSPAGENIFLTTATDVQSARFGA EAVEWWRGSPAHYANMVRDWAADEMWPTLDSATRNNAGVGIEKRQVPPYSLDSEFQDLVPPVVGSEASQIFMGMENFVLP SVPGQEGPEDERVGIESVFYTQGHGYFIPTIDLHLGSGMARVRFKGRAIEVHDNLSELFTPLAARFQTASGRRMLRVAGL ARQKAAEGPQFIVLFQGLAHDFYATRQELGRFRLPDNLGQVSYPKFSESGARMVISYTEAVSEDQIITESHFGTYAADGG VGDPVTTATTDAERVWGEVLHFVEWHGGTFAEVLQQSLDVTVGWGSTWMRRACRGSYRLFADYQGESIVYASVEVDSELF QDEPGAGTTTGPATYYERTRLRSTLVFPDGTRLPVTNTDTDESFTVSGYFCHLLYLDILRPVRTALMRYEMQGTGYDVGG LNPRTCSMSIVIQGQTVKSKENVLFPTGDEEAAGRASQGWTNTNIGVGFTSFLPMAVLRSADGTRRIRVNPAGETAVAAV THKASLVGMCAYSADVQMHGATFSQRHSQVGTSVSHGVPMSLGSQASVDFLAAFHRDEFVYAGKVSNTIRVGPDYGTAWY GDDEFIRHSSLPLEQITGIPDLAQNILPIGVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99943; Mature: 99812
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRLPFTAPGRATSGNGDSQSLDAEARRLMFQAKLLAGASGVPVLGMRREMGDGSVVTA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECHHHCCCCCCEEEE QLAGPVERVTMRADRQEVPQEEPIGAISRLVWFPEGFVITPRSPAAPLGYGMPNTSDGLG ECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCC TPLGPLRQVIINRFKDNQYPDAVLRAAGGKVSATHRNYCAAPLFYMDWEARGEFVIGARV CCHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEECCCCCCCCCEEEEEECCCCCEEEEEEC DGRVKPQFRARWQRNYSEAETATWYCHRPTSAARAELDVHKSIREETNLIRAAAGRGEVH CCCCCHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PPLRGYEGMLSELVLYLNKTAKVLGHDSRSFRDGHLSFEQDRYATRAGLRGSVGILTPTS CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCC PAGENIFLTTATDVQSARFGAEAVEWWRGSPAHYANMVRDWAADEMWPTLDSATRNNAGV CCCCEEEEEECCCHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC GIEKRQVPPYSLDSEFQDLVPPVVGSEASQIFMGMENFVLPSVPGQEGPEDERVGIESVF CCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCEEEE YTQGHGYFIPTIDLHLGSGMARVRFKGRAIEVHDNLSELFTPLAARFQTASGRRMLRVAG EECCCCEEEEEEEEEECCCEEEEEEECCEEEECCCHHHHHHHHHHHHCCCCCCEEHHHHH LARQKAAEGPQFIVLFQGLAHDFYATRQELGRFRLPDNLGQVSYPKFSESGARMVISYTE HHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHH AVSEDQIITESHFGTYAADGGVGDPVTTATTDAERVWGEVLHFVEWHGGTFAEVLQQSLD HCCCCCEEECCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC VTVGWGSTWMRRACRGSYRLFADYQGESIVYASVEVDSELFQDEPGAGTTTGPATYYERT EEEECCHHHHHHHHCCCEEEEEECCCCEEEEEEEECCHHHHCCCCCCCCCCCCHHHHHHH RLRSTLVFPDGTRLPVTNTDTDESFTVSGYFCHLLYLDILRPVRTALMRYEMQGTGYDVG HHHEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECC GLNPRTCSMSIVIQGQTVKSKENVLFPTGDEEAAGRASQGWTNTNIGVGFTSFLPMAVLR CCCCCEEEEEEEEECCEECCCCCEEECCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH SADGTRRIRVNPAGETAVAAVTHKASLVGMCAYSADVQMHGATFSQRHSQVGTSVSHGVP CCCCCEEEEECCCCCCEEEEHHHHHHEEEEEEEECCEEECCCHHHHHHHHHCCHHHCCCC MSLGSQASVDFLAAFHRDEFVYAGKVSNTIRVGPDYGTAWYGDDEFIRHSSLPLEQITGI CCCCCCCCHHHHHHHCCCCEEEEECCCCEEEECCCCCCEECCCHHHHHCCCCCHHHHCCC PDLAQNILPIGVL HHHHHCCCCCCCC >Mature Secondary Structure TDRLPFTAPGRATSGNGDSQSLDAEARRLMFQAKLLAGASGVPVLGMRREMGDGSVVTA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECHHHCCCCCCEEEE QLAGPVERVTMRADRQEVPQEEPIGAISRLVWFPEGFVITPRSPAAPLGYGMPNTSDGLG ECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCC TPLGPLRQVIINRFKDNQYPDAVLRAAGGKVSATHRNYCAAPLFYMDWEARGEFVIGARV CCHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEECCCCCCCCCEEEEEECCCCCEEEEEEC DGRVKPQFRARWQRNYSEAETATWYCHRPTSAARAELDVHKSIREETNLIRAAAGRGEVH CCCCCHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PPLRGYEGMLSELVLYLNKTAKVLGHDSRSFRDGHLSFEQDRYATRAGLRGSVGILTPTS CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCCC PAGENIFLTTATDVQSARFGAEAVEWWRGSPAHYANMVRDWAADEMWPTLDSATRNNAGV CCCCEEEEEECCCHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC GIEKRQVPPYSLDSEFQDLVPPVVGSEASQIFMGMENFVLPSVPGQEGPEDERVGIESVF CCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCEEEE YTQGHGYFIPTIDLHLGSGMARVRFKGRAIEVHDNLSELFTPLAARFQTASGRRMLRVAG EECCCCEEEEEEEEEECCCEEEEEEECCEEEECCCHHHHHHHHHHHHCCCCCCEEHHHHH LARQKAAEGPQFIVLFQGLAHDFYATRQELGRFRLPDNLGQVSYPKFSESGARMVISYTE HHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHH AVSEDQIITESHFGTYAADGGVGDPVTTATTDAERVWGEVLHFVEWHGGTFAEVLQQSLD HCCCCCEEECCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC VTVGWGSTWMRRACRGSYRLFADYQGESIVYASVEVDSELFQDEPGAGTTTGPATYYERT EEEECCHHHHHHHHCCCEEEEEECCCCEEEEEEEECCHHHHCCCCCCCCCCCCHHHHHHH RLRSTLVFPDGTRLPVTNTDTDESFTVSGYFCHLLYLDILRPVRTALMRYEMQGTGYDVG HHHEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECC GLNPRTCSMSIVIQGQTVKSKENVLFPTGDEEAAGRASQGWTNTNIGVGFTSFLPMAVLR CCCCCEEEEEEEEECCEECCCCCEEECCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH SADGTRRIRVNPAGETAVAAVTHKASLVGMCAYSADVQMHGATFSQRHSQVGTSVSHGVP CCCCCEEEEECCCCCCEEEEHHHHHHEEEEEEEECCEEECCCHHHHHHHHHCCHHHCCCC MSLGSQASVDFLAAFHRDEFVYAGKVSNTIRVGPDYGTAWYGDDEFIRHSSLPLEQITGI CCCCCCCCHHHHHHHCCCCEEEEECCCCEEEECCCCCCEECCCHHHHHCCCCCHHHHCCC PDLAQNILPIGVL HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA