| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610391
Identifier: 120610391
GI number: 120610391
Start: 1863622
End: 1864449
Strand: Direct
Name: 120610391
Synonym: Aave_1708
Alternate gene names: NA
Gene position: 1863622-1864449 (Clockwise)
Preceding gene: 120610390
Following gene: 120610392
Centisome position: 34.82
GC content: 65.34
Gene sequence:
>828_bases ATGAGCGCTCCTCTTCTGGGCTGGCTGGGTGGCGCAAACCGCATGGAGCCGCCGGCGAGCACCGACAACTTTGGCAACGG CTCCATGGGTCGATACGTGGTCGGGTACTTCGGCTTCGTCGTCGCCGACGGCGACCCGGAGGGATACACCGTACGGCTGA CGTTCACGCCGGAAGACGGCAGCGAGCCTGTTGTTTCGACCATCTCCGGATCCTCGGATCCGATGAGCTTCTATGTGCCA GACTTCGGCGGTGGGCCGCTGAATGCCGGCGTCGTGGAAATCGAAGTCATCGCGCCCCAGGTCTCCGGCAACAAGCTCTT CTATGTGATCACGGGCGTTGACGGTGCCTATGGCTCCGGGTCTTGGTACGCCGAGGGGGCGAGCGGGCCGCAACCGGTTC CGCCGACGAAGATGGGCTGGGGCTCCGTAGGGCCCCAAGGGCATCCCGCACAGGCGCCGTTCCTGGCGACGAACGCGGGG CAGAACGAAAGCTTCTTCGGCGACGACTACGTGTATTTCGGCGTCGAGGGAGGAGCCGGCGGCACGCTGGTTCAGTACGC CATCACCTTCACGCCGGCCGATGGCGGGGAGATCGAGCACTCCACGCAGACCGGCACCGGAGCAAACGCCGAAGGATCTG TGCGGGCGAACGTGTTTTCTCCGGGCGTGACGGTGGTCAGGGGAACCGCCGGCGGCATTCCGCTTGGAAACGAGTTGTTC CTCACCGTGACGGCTTCAAGCGGCGCATATGGGGCGATCGCATGGCATTCGGAGGGCGTGAGTCCGGCTTGGTGGCGCGA CCTGCGGAATGCGAGGGAGGTGGCCTGA
Upstream 100 bases:
>100_bases GGAACAGGCGCGCGAATGGCTGGAGCCGCGACCCGCGCATGCTCACCGCCCAGGTGATGGCACGCCGTTGGATAGAGATC GAGCACAGGGAGGGCCGGGC
Downstream 100 bases:
>100_bases TGGCGCGCATACCACTGCCGGTGCTGGGTATGGACCTGCTCTCCGACGAGGTGGAGATGCCGGCGGGAACCGTCCGCGAA GCAATCAACGTGGACATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MSAPLLGWLGGANRMEPPASTDNFGNGSMGRYVVGYFGFVVADGDPEGYTVRLTFTPEDGSEPVVSTISGSSDPMSFYVP DFGGGPLNAGVVEIEVIAPQVSGNKLFYVITGVDGAYGSGSWYAEGASGPQPVPPTKMGWGSVGPQGHPAQAPFLATNAG QNESFFGDDYVYFGVEGGAGGTLVQYAITFTPADGGEIEHSTQTGTGANAEGSVRANVFSPGVTVVRGTAGGIPLGNELF LTVTASSGAYGAIAWHSEGVSPAWWRDLRNAREVA
Sequences:
>Translated_275_residues MSAPLLGWLGGANRMEPPASTDNFGNGSMGRYVVGYFGFVVADGDPEGYTVRLTFTPEDGSEPVVSTISGSSDPMSFYVP DFGGGPLNAGVVEIEVIAPQVSGNKLFYVITGVDGAYGSGSWYAEGASGPQPVPPTKMGWGSVGPQGHPAQAPFLATNAG QNESFFGDDYVYFGVEGGAGGTLVQYAITFTPADGGEIEHSTQTGTGANAEGSVRANVFSPGVTVVRGTAGGIPLGNELF LTVTASSGAYGAIAWHSEGVSPAWWRDLRNAREVA >Mature_274_residues SAPLLGWLGGANRMEPPASTDNFGNGSMGRYVVGYFGFVVADGDPEGYTVRLTFTPEDGSEPVVSTISGSSDPMSFYVPD FGGGPLNAGVVEIEVIAPQVSGNKLFYVITGVDGAYGSGSWYAEGASGPQPVPPTKMGWGSVGPQGHPAQAPFLATNAGQ NESFFGDDYVYFGVEGGAGGTLVQYAITFTPADGGEIEHSTQTGTGANAEGSVRANVFSPGVTVVRGTAGGIPLGNELFL TVTASSGAYGAIAWHSEGVSPAWWRDLRNAREVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28234; Mature: 28103
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPLLGWLGGANRMEPPASTDNFGNGSMGRYVVGYFGFVVADGDPEGYTVRLTFTPEDG CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCCC SEPVVSTISGSSDPMSFYVPDFGGGPLNAGVVEIEVIAPQVSGNKLFYVITGVDGAYGSG CCCEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCC SWYAEGASGPQPVPPTKMGWGSVGPQGHPAQAPFLATNAGQNESFFGDDYVYFGVEGGAG CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEECCCEEEEEEECCCC GTLVQYAITFTPADGGEIEHSTQTGTGANAEGSVRANVFSPGVTVVRGTAGGIPLGNELF CEEEEEEEEEECCCCCCEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCEEE LTVTASSGAYGAIAWHSEGVSPAWWRDLRNAREVA EEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SAPLLGWLGGANRMEPPASTDNFGNGSMGRYVVGYFGFVVADGDPEGYTVRLTFTPEDG CCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCCC SEPVVSTISGSSDPMSFYVPDFGGGPLNAGVVEIEVIAPQVSGNKLFYVITGVDGAYGSG CCCEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCC SWYAEGASGPQPVPPTKMGWGSVGPQGHPAQAPFLATNAGQNESFFGDDYVYFGVEGGAG CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEECCCEEEEEEECCCC GTLVQYAITFTPADGGEIEHSTQTGTGANAEGSVRANVFSPGVTVVRGTAGGIPLGNELF CEEEEEEEEEECCCCCCEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCEEE LTVTASSGAYGAIAWHSEGVSPAWWRDLRNAREVA EEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA