| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610390
Identifier: 120610390
GI number: 120610390
Start: 1863026
End: 1863625
Strand: Direct
Name: 120610390
Synonym: Aave_1707
Alternate gene names: NA
Gene position: 1863026-1863625 (Clockwise)
Preceding gene: 120610389
Following gene: 120610391
Centisome position: 34.8
GC content: 67.0
Gene sequence:
>600_bases ATGTCTTCCCTCATCACCGCCATCGTCCTCTCCGCTTCCCCGGTGTGCATTGAGTTGCCGGGGCTGGAGGTGCTTGGTCG CGTGCAGACGCTCAGGAACCCGGCGGATCTGCATGCTGCGAGGCTCGATGCGCTCGGCGCAGTCCGTACCCCCTGGTGCT TCTTCCTGGATGACGATGACGAACTGCCCGCGGACTATCTGGACGTGCTGCAGGTGTGCGCAACTCGGGCGGACGCGATG GCGGTTCCCCTGGCGTACACGGATGAGATTCTGCGCGAGCCCGGGCGCGCCGATGTGCGGCGCTCCTGGTACGACTACGA CCGTGATCGGCACCGTTGCGGTCCCATGGGGTTGCACCACCTGGTGCTGATGCGCACCATCAGCGCGAAGGCTGCTGCAG CCAGGCTGCCGCGGGGAACCTACTGGACGGAGCACATGCTGTACTGGGCCATGGGCGCGGCCGGCGCGGCCTACGTGCCC AGGGTCGGCTACATCTGGAACAGGCGCGCGAATGGCTGGAGCCGCGACCCGCGCATGCTCACCGCCCAGGTGATGGCACG CCGTTGGATAGAGATCGAGCACAGGGAGGGCCGGGCATGA
Upstream 100 bases:
>100_bases GAGCGTGCTTTCACGGCCTATTTCGGCCCGCTGTGGGACTCCGATCTGCGTCGCACAACGCGACAAGAACCCCCGCACAT GAATGCGGTGCTCTGCTGAC
Downstream 100 bases:
>100_bases GCGCTCCTCTTCTGGGCTGGCTGGGTGGCGCAAACCGCATGGAGCCGCCGGCGAGCACCGACAACTTTGGCAACGGCTCC ATGGGTCGATACGTGGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSSLITAIVLSASPVCIELPGLEVLGRVQTLRNPADLHAARLDALGAVRTPWCFFLDDDDELPADYLDVLQVCATRADAM AVPLAYTDEILREPGRADVRRSWYDYDRDRHRCGPMGLHHLVLMRTISAKAAAARLPRGTYWTEHMLYWAMGAAGAAYVP RVGYIWNRRANGWSRDPRMLTAQVMARRWIEIEHREGRA
Sequences:
>Translated_199_residues MSSLITAIVLSASPVCIELPGLEVLGRVQTLRNPADLHAARLDALGAVRTPWCFFLDDDDELPADYLDVLQVCATRADAM AVPLAYTDEILREPGRADVRRSWYDYDRDRHRCGPMGLHHLVLMRTISAKAAAARLPRGTYWTEHMLYWAMGAAGAAYVP RVGYIWNRRANGWSRDPRMLTAQVMARRWIEIEHREGRA >Mature_198_residues SSLITAIVLSASPVCIELPGLEVLGRVQTLRNPADLHAARLDALGAVRTPWCFFLDDDDELPADYLDVLQVCATRADAMA VPLAYTDEILREPGRADVRRSWYDYDRDRHRCGPMGLHHLVLMRTISAKAAAARLPRGTYWTEHMLYWAMGAAGAAYVPR VGYIWNRRANGWSRDPRMLTAQVMARRWIEIEHREGRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22531; Mature: 22400
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLITAIVLSASPVCIELPGLEVLGRVQTLRNPADLHAARLDALGAVRTPWCFFLDDDD CHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCC ELPADYLDVLQVCATRADAMAVPLAYTDEILREPGRADVRRSWYDYDRDRHRCGPMGLHH CCCHHHHHHHHHHHHCHHHEECCHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCCCHHHH LVLMRTISAKAAAARLPRGTYWTEHMLYWAMGAAGAAYVPRVGYIWNRRANGWSRDPRML HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHCCCCCHHCCCCCCCCCCCHHHH TAQVMARRWIEIEHREGRA HHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SSLITAIVLSASPVCIELPGLEVLGRVQTLRNPADLHAARLDALGAVRTPWCFFLDDDD HHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCC ELPADYLDVLQVCATRADAMAVPLAYTDEILREPGRADVRRSWYDYDRDRHRCGPMGLHH CCCHHHHHHHHHHHHCHHHEECCHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCCCHHHH LVLMRTISAKAAAARLPRGTYWTEHMLYWAMGAAGAAYVPRVGYIWNRRANGWSRDPRML HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHCCCCCHHCCCCCCCCCCCHHHH TAQVMARRWIEIEHREGRA HHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA