| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is hyuE [H]
Identifier: 120610241
GI number: 120610241
Start: 1722350
End: 1723153
Strand: Direct
Name: hyuE [H]
Synonym: Aave_1556
Alternate gene names: 120610241
Gene position: 1722350-1723153 (Clockwise)
Preceding gene: 120610238
Following gene: 120610243
Centisome position: 32.18
GC content: 77.61
Gene sequence:
>804_bases GTGCCACCCCGCGAAGCGGCGGCGCAGCTCCGGCGGCGCGGCCCGCGCCAGGACCGCACCGCGTCCGGCCAGGCCCTGGC CGGCCGGCGAGGGGCCCGGCGTCCCGCGCACCCGCGTGCGGCCGGTGCTCGTGCGCCTGGCCGGCGAGCAGGTGGTCACG CTCACGCTCACGCCGCGGCGCGGCGCCTCCATCGCCCGCCCCACGGTGGACGAGGCCCGCGAGGTGTTCGAGGCCCGCCG CCTCATCGAGTCGCGCCCGACGCCGTGCTGATCGGCTGCTTCGGCGACCCGGGCCTGTTCGCGCTCCGGGAATGCAGCCC CGTGCCGGTCACCGGGCTGGCCGAAGCGTCCTTCCTGGCGGTCGCGCGCCATGGCCGCTTCGGCATCGTCACGGACGGTG AACGTTGGGAGGCCATGCTGCTGCGGCTCGCGCAGGCACTGGGCCATGCGGACCGGCTGGCCGGTGTGCGCACCGTGGCC CCTTCGGGCGCGGAGCTGGCGGCCGATCCCGCCGGAGCCCAGGCCCTGCTCGCCCGGGCGTGCCAGGCCATGGCGCGCGA GCCCGGCGTGCAGGCCGTGGTGCTGGGCGGGGCAGGGCTCGCGGGCATGGCGAAGGCCGTGCAGCCCCGGGTGGACGTGC CCGTCATCGACAGCGTCGAAGCCGGCGCGGGGTGGGCCTTGCAGGCGCCGCCGCCGGCGGGGCGCGAGGCACCCGGCTGC GACGTGGCATGGGAGAACGTGCCGGAAGCACTGCGGCGGATGGGCACGGGCCGCTTAGGGAAGGTCTGCACAACACGCGC ATGA
Upstream 100 bases:
>100_bases TCCAAAAGGGTCTGCAGGAGCGGCAGCCCGCCCCCGTTGTACTGTTGGGCGCCATGATCGTCCAGCGGCCCTGCCCGCCG GGTGTCCGATCCGAAGCGGA
Downstream 100 bases:
>100_bases GTGTGCGGATGCGCTTAACCTGTTGATGTGTATGGCGCTCCGGGCCCGTTTCGCTTCAGTTCGGGTGAATGCGACGTAGA TTGGCCGCCGCCTTGGCCTG
Product: Asp/Glu racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MPPREAAAQLRRRGPRQDRTASGQALAGRRGARRPAHPRAAGARAPGRRAGGHAHAHAAARRLHRPPHGGRGPRGVRGPP PHRVAPDAVLIGCFGDPGLFALRECSPVPVTGLAEASFLAVARHGRFGIVTDGERWEAMLLRLAQALGHADRLAGVRTVA PSGAELAADPAGAQALLARACQAMAREPGVQAVVLGGAGLAGMAKAVQPRVDVPVIDSVEAGAGWALQAPPPAGREAPGC DVAWENVPEALRRMGTGRLGKVCTTRA
Sequences:
>Translated_267_residues MPPREAAAQLRRRGPRQDRTASGQALAGRRGARRPAHPRAAGARAPGRRAGGHAHAHAAARRLHRPPHGGRGPRGVRGPP PHRVAPDAVLIGCFGDPGLFALRECSPVPVTGLAEASFLAVARHGRFGIVTDGERWEAMLLRLAQALGHADRLAGVRTVA PSGAELAADPAGAQALLARACQAMAREPGVQAVVLGGAGLAGMAKAVQPRVDVPVIDSVEAGAGWALQAPPPAGREAPGC DVAWENVPEALRRMGTGRLGKVCTTRA >Mature_266_residues PPREAAAQLRRRGPRQDRTASGQALAGRRGARRPAHPRAAGARAPGRRAGGHAHAHAAARRLHRPPHGGRGPRGVRGPPP HRVAPDAVLIGCFGDPGLFALRECSPVPVTGLAEASFLAVARHGRFGIVTDGERWEAMLLRLAQALGHADRLAGVRTVAP SGAELAADPAGAQALLARACQAMAREPGVQAVVLGGAGLAGMAKAVQPRVDVPVIDSVEAGAGWALQAPPPAGREAPGCD VAWENVPEALRRMGTGRLGKVCTTRA
Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]
COG id: COG4126
COG function: function code E; Hydantoin racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.99.5 [H]
Molecular weight: Translated: 27504; Mature: 27373
Theoretical pI: Translated: 12.09; Mature: 12.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPREAAAQLRRRGPRQDRTASGQALAGRRGARRPAHPRAAGARAPGRRAGGHAHAHAAA CCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH RRLHRPPHGGRGPRGVRGPPPHRVAPDAVLIGCFGDPGLFALRECSPVPVTGLAEASFLA HHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHH VARHGRFGIVTDGERWEAMLLRLAQALGHADRLAGVRTVAPSGAELAADPAGAQALLARA HHHCCCEEEEECCHHHHHHHHHHHHHHCHHHHHCCHHEECCCCCCCCCCCCHHHHHHHHH CQAMAREPGVQAVVLGGAGLAGMAKAVQPRVDVPVIDSVEAGAGWALQAPPPAGREAPGC HHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC DVAWENVPEALRRMGTGRLGKVCTTRA CCCHHHHHHHHHHHCCCCCCCHHCCCC >Mature Secondary Structure PPREAAAQLRRRGPRQDRTASGQALAGRRGARRPAHPRAAGARAPGRRAGGHAHAHAAA CCHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH RRLHRPPHGGRGPRGVRGPPPHRVAPDAVLIGCFGDPGLFALRECSPVPVTGLAEASFLA HHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHH VARHGRFGIVTDGERWEAMLLRLAQALGHADRLAGVRTVAPSGAELAADPAGAQALLARA HHHCCCEEEEECCHHHHHHHHHHHHHHCHHHHHCCHHEECCCCCCCCCCCCHHHHHHHHH CQAMAREPGVQAVVLGGAGLAGMAKAVQPRVDVPVIDSVEAGAGWALQAPPPAGREAPGC HHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC DVAWENVPEALRRMGTGRLGKVCTTRA CCCHHHHHHHHHHHCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339422 [H]