| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610243
Identifier: 120610243
GI number: 120610243
Start: 1724331
End: 1724888
Strand: Direct
Name: 120610243
Synonym: Aave_1558
Alternate gene names: NA
Gene position: 1724331-1724888 (Clockwise)
Preceding gene: 120610241
Following gene: 120610245
Centisome position: 32.21
GC content: 52.69
Gene sequence:
>558_bases GTGCCTGGTGAAGTCCCGCAGGCTGGCGCATTCACTGCTCTGGACTATGCTCGGCGGGGTTTCGATGCATTGGTCGGGGT TGTGGGAGGCTCCCACGGGAGGGCGCAAAGCCGTTCGCCCGATGCAGAAGTCTCCTGTTTTCAGCCATGTTCAGAAATGC ATAAGATTTTTTTGCCCTTCGTGCTTTGGGTGGGTTTGAATGCCGCGGCGGAAGAGGGTTTGGATGCTTCAAAGCTCGAT GCCCATCAATTTACATTGGGCCATGCTGGTTTTGCCGGGCATATTTCCGAGCCGGAAAGATATATGGAAATGGTGGCAAA AAATCCCAATGCCGTGAAGTTCTTCTCGGGGGTGATTGATGATGCTTCCTCAACGAGCGTCGCCAAGCTTTATGCGCTCT GCGGAATGAAGAAGGCTGGAGCCCGGGACTTACAGTCGTATGAGGAAAAGGTTTTGAAAGTGGGTGGCAAGGTCTCGACC ATGCACGGAGATCAAATGCAAAAGGAGGAGATCGGCTTTTTCGTCCATCGCATAAGAACAGGCGGTTGCAATCAATGA
Upstream 100 bases:
>100_bases GTTTCATGCGACGTATCGTCTCAGGGCTTCATGCCGATGCCAAGCATGTCGTGGGGCGGTTTATGCAGACCTTCCTTAGG CGATTGATGCCCGGGCGGGA
Downstream 100 bases:
>100_bases ACCGTTGATTGGCGAGTGGGTTTTCAGGACTTTGGCGCGGATCAGTCCGATCCGCGCTCACGGTGCCAATGCGGGGGCCG TCGCGCGCCTCGCCCCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MPGEVPQAGAFTALDYARRGFDALVGVVGGSHGRAQSRSPDAEVSCFQPCSEMHKIFLPFVLWVGLNAAAEEGLDASKLD AHQFTLGHAGFAGHISEPERYMEMVAKNPNAVKFFSGVIDDASSTSVAKLYALCGMKKAGARDLQSYEEKVLKVGGKVST MHGDQMQKEEIGFFVHRIRTGGCNQ
Sequences:
>Translated_185_residues MPGEVPQAGAFTALDYARRGFDALVGVVGGSHGRAQSRSPDAEVSCFQPCSEMHKIFLPFVLWVGLNAAAEEGLDASKLD AHQFTLGHAGFAGHISEPERYMEMVAKNPNAVKFFSGVIDDASSTSVAKLYALCGMKKAGARDLQSYEEKVLKVGGKVST MHGDQMQKEEIGFFVHRIRTGGCNQ >Mature_184_residues PGEVPQAGAFTALDYARRGFDALVGVVGGSHGRAQSRSPDAEVSCFQPCSEMHKIFLPFVLWVGLNAAAEEGLDASKLDA HQFTLGHAGFAGHISEPERYMEMVAKNPNAVKFFSGVIDDASSTSVAKLYALCGMKKAGARDLQSYEEKVLKVGGKVSTM HGDQMQKEEIGFFVHRIRTGGCNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19912; Mature: 19781
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGEVPQAGAFTALDYARRGFDALVGVVGGSHGRAQSRSPDAEVSCFQPCSEMHKIFLPF CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VLWVGLNAAAEEGLDASKLDAHQFTLGHAGFAGHISEPERYMEMVAKNPNAVKFFSGVID HHHHCCCHHHHCCCCCHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHC DASSTSVAKLYALCGMKKAGARDLQSYEEKVLKVGGKVSTMHGDQMQKEEIGFFVHRIRT CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHC GGCNQ CCCCC >Mature Secondary Structure PGEVPQAGAFTALDYARRGFDALVGVVGGSHGRAQSRSPDAEVSCFQPCSEMHKIFLPF CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VLWVGLNAAAEEGLDASKLDAHQFTLGHAGFAGHISEPERYMEMVAKNPNAVKFFSGVID HHHHCCCHHHHCCCCCHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHC DASSTSVAKLYALCGMKKAGARDLQSYEEKVLKVGGKVSTMHGDQMQKEEIGFFVHRIRT CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHC GGCNQ CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA