| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is braF [H]
Identifier: 120609480
GI number: 120609480
Start: 844559
End: 845350
Strand: Reverse
Name: braF [H]
Synonym: Aave_0786
Alternate gene names: 120609480
Gene position: 845350-844559 (Counterclockwise)
Preceding gene: 120609481
Following gene: 120609479
Centisome position: 15.79
GC content: 64.77
Gene sequence:
>792_bases ATGACCACTCCCAGCAAGAAGACCGGCGACGTGATCCTCGACGTGCGCAACATCAGCCTGCGCTTCGGCGGGGTGAAGGC GCTCACCGACATCTCGTTCGACGTGCGCGAGCACGAGATCCGCTCCATCATCGGCCCGAACGGCGCCGGCAAGAGCTCGA TGCTCAACTGCATCAACGGCGTCTATGCGCCGCAGGAAGGTTCCATCACCTTCCGGGGCAAGACCTTCGCCCACATGAAT TCGCGCCAGGTGGCCGAGATGGGCGTGGCGCGCACCTTCCAGAACCTGGCGCTGTTCAAGGGCATGAGCGTGCTGGACAA CATCATGTCCGGCCGCAACCTGAAGATCCGGAGCAACCTGCTGATGCAGGCCCTGCGCCTGGGGCCGGCGGTGGCCGAGG AGATCCGCCACCGCGAAGTGGTCGAGCGCATCATCGATTTCCTGGAGATCCAGGCCTGGCGCAAGGCGCCCGTGGGCCAA TTGCCCTACGGCCTGCAAAAGCGCGTGGACCTGGGACGGGCCCTGGCCATGGAGCCGCAGGTGCTGCTGCTCGACGAGCC CATGGCGGGCATGAACGTGGAAGAGAAGCAGGACATGTGCCGCTTCATCCTCGACGTGAACGACGAGTTCGGCACCACCA TCGTGCTGATCGAGCACGACATGGGCGTGGTGATGGACATCTCCGACCGTGTCGTGGTGCTGGACTACGGCAAGAAGATC GGCGACGGCACGCCGCAAGCGGTGCGCGAGAACGAAGACGTCATCCGCGCCTACCTCGGCGCCGGCCACTAG
Upstream 100 bases:
>100_bases CGGGCCGCGTGAGCGCCACGCTGCGCATCGAGGACGCGAAGACCTTCCCGCCCGTGCGGCAGGCCGCCTGACCCCGCGCC GCAGCGCAACGTACAACGCC
Downstream 100 bases:
>100_bases ACACGCAGGACATCGGAGGCATACGCCATGGGTTTCTTTCTCGAAACGGTGTTCGGCGGCCTGATGGCCGGCATGCTCTA TGCGCTGGTGGCGCTGGGGT
Product: ABC transporter-like protein
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTTPSKKTGDVILDVRNISLRFGGVKALTDISFDVREHEIRSIIGPNGAGKSSMLNCINGVYAPQEGSITFRGKTFAHMN SRQVAEMGVARTFQNLALFKGMSVLDNIMSGRNLKIRSNLLMQALRLGPAVAEEIRHREVVERIIDFLEIQAWRKAPVGQ LPYGLQKRVDLGRALAMEPQVLLLDEPMAGMNVEEKQDMCRFILDVNDEFGTTIVLIEHDMGVVMDISDRVVVLDYGKKI GDGTPQAVRENEDVIRAYLGAGH
Sequences:
>Translated_263_residues MTTPSKKTGDVILDVRNISLRFGGVKALTDISFDVREHEIRSIIGPNGAGKSSMLNCINGVYAPQEGSITFRGKTFAHMN SRQVAEMGVARTFQNLALFKGMSVLDNIMSGRNLKIRSNLLMQALRLGPAVAEEIRHREVVERIIDFLEIQAWRKAPVGQ LPYGLQKRVDLGRALAMEPQVLLLDEPMAGMNVEEKQDMCRFILDVNDEFGTTIVLIEHDMGVVMDISDRVVVLDYGKKI GDGTPQAVRENEDVIRAYLGAGH >Mature_262_residues TTPSKKTGDVILDVRNISLRFGGVKALTDISFDVREHEIRSIIGPNGAGKSSMLNCINGVYAPQEGSITFRGKTFAHMNS RQVAEMGVARTFQNLALFKGMSVLDNIMSGRNLKIRSNLLMQALRLGPAVAEEIRHREVVERIIDFLEIQAWRKAPVGQL PYGLQKRVDLGRALAMEPQVLLLDEPMAGMNVEEKQDMCRFILDVNDEFGTTIVLIEHDMGVVMDISDRVVVLDYGKKIG DGTPQAVRENEDVIRAYLGAGH
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI31657092, Length=235, Percent_Identity=25.9574468085106, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI27477115, Length=189, Percent_Identity=28.042328042328, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI45446740, Length=219, Percent_Identity=29.2237442922374, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI47078218, Length=219, Percent_Identity=29.2237442922374, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI27436953, Length=192, Percent_Identity=30.2083333333333, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI153792144, Length=191, Percent_Identity=29.8429319371728, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI27881501, Length=251, Percent_Identity=25.0996015936255, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI30795238, Length=251, Percent_Identity=25.0996015936255, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI9961252, Length=251, Percent_Identity=26.6932270916335, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI4505771, Length=251, Percent_Identity=26.6932270916335, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI21536376, Length=222, Percent_Identity=24.7747747747748, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI27262624, Length=169, Percent_Identity=26.6272189349112, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI27262626, Length=169, Percent_Identity=26.6272189349112, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI42741659, Length=223, Percent_Identity=26.0089686098655, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI9961250, Length=230, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1789864, Length=253, Percent_Identity=39.5256916996047, Blast_Score=196, Evalue=1e-51, Organism=Escherichia coli, GI1788761, Length=239, Percent_Identity=31.3807531380753, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1788472, Length=240, Percent_Identity=31.25, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI48995001, Length=233, Percent_Identity=29.1845493562232, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI87081709, Length=235, Percent_Identity=28.936170212766, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI87081791, Length=249, Percent_Identity=28.9156626506024, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1787029, Length=244, Percent_Identity=28.6885245901639, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1788210, Length=248, Percent_Identity=28.6290322580645, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1787712, Length=226, Percent_Identity=30.9734513274336, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI1789593, Length=248, Percent_Identity=29.0322580645161, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1790467, Length=233, Percent_Identity=30.9012875536481, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1788225, Length=245, Percent_Identity=29.3877551020408, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1786563, Length=226, Percent_Identity=30.0884955752212, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1789991, Length=255, Percent_Identity=29.0196078431373, Blast_Score=101, Evalue=4e-23, Organism=Escherichia coli, GI1786872, Length=253, Percent_Identity=28.0632411067194, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1789032, Length=256, Percent_Identity=30.078125, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1788644, Length=248, Percent_Identity=32.258064516129, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1790525, Length=252, Percent_Identity=25.7936507936508, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1788450, Length=253, Percent_Identity=27.2727272727273, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787370, Length=229, Percent_Identity=27.0742358078603, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1790190, Length=242, Percent_Identity=25.6198347107438, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI1786398, Length=222, Percent_Identity=27.9279279279279, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI1789672, Length=247, Percent_Identity=25.5060728744939, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1789586, Length=251, Percent_Identity=27.8884462151394, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI87082268, Length=251, Percent_Identity=28.2868525896414, Blast_Score=92, Evalue=2e-20, Organism=Escherichia coli, GI1790739, Length=236, Percent_Identity=27.9661016949153, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI87082267, Length=229, Percent_Identity=29.2576419213974, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1787089, Length=256, Percent_Identity=27.734375, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1786345, Length=250, Percent_Identity=27.6, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI48994997, Length=245, Percent_Identity=25.7142857142857, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87081782, Length=244, Percent_Identity=26.6393442622951, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788897, Length=238, Percent_Identity=26.4705882352941, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1789891, Length=215, Percent_Identity=26.5116279069767, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI145693107, Length=258, Percent_Identity=27.906976744186, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI48994883, Length=255, Percent_Identity=27.0588235294118, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI48994943, Length=262, Percent_Identity=24.4274809160305, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786253, Length=255, Percent_Identity=27.4509803921569, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1790162, Length=279, Percent_Identity=27.5985663082437, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1786803, Length=246, Percent_Identity=23.1707317073171, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1787759, Length=249, Percent_Identity=26.5060240963855, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787547, Length=251, Percent_Identity=24.3027888446215, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789873, Length=218, Percent_Identity=27.9816513761468, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1787792, Length=246, Percent_Identity=23.9837398373984, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1789962, Length=229, Percent_Identity=23.1441048034935, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1786319, Length=227, Percent_Identity=25.9911894273128, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786698, Length=227, Percent_Identity=25.5506607929515, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1787500, Length=238, Percent_Identity=23.9495798319328, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787758, Length=256, Percent_Identity=23.4375, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI87081834, Length=232, Percent_Identity=23.2758620689655, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788506, Length=270, Percent_Identity=24.0740740740741, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787164, Length=213, Percent_Identity=26.7605633802817, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786703, Length=214, Percent_Identity=25.2336448598131, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1788053, Length=233, Percent_Identity=27.0386266094421, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1786654, Length=223, Percent_Identity=26.457399103139, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787112, Length=244, Percent_Identity=23.7704918032787, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789963, Length=252, Percent_Identity=23.4126984126984, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787041, Length=241, Percent_Identity=22.4066390041494, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787105, Length=211, Percent_Identity=23.2227488151659, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1786981, Length=208, Percent_Identity=27.8846153846154, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17510237, Length=230, Percent_Identity=25.6521739130435, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI115534520, Length=248, Percent_Identity=26.6129032258064, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI115533608, Length=237, Percent_Identity=24.8945147679325, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71984940, Length=221, Percent_Identity=25.3393665158371, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17533971, Length=234, Percent_Identity=24.3589743589744, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71983510, Length=242, Percent_Identity=20.2479338842975, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71983516, Length=242, Percent_Identity=20.2479338842975, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71983523, Length=242, Percent_Identity=20.2479338842975, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI193202349, Length=251, Percent_Identity=22.3107569721116, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI25146777, Length=263, Percent_Identity=26.615969581749, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI221512771, Length=246, Percent_Identity=26.8292682926829, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI24648314, Length=240, Percent_Identity=25.4166666666667, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24666092, Length=226, Percent_Identity=26.9911504424779, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI24643674, Length=232, Percent_Identity=25.8620689655172, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI28571209, Length=202, Percent_Identity=25.7425742574257, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI28573571, Length=234, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI28574744, Length=210, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 29180; Mature: 29049
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPSKKTGDVILDVRNISLRFGGVKALTDISFDVREHEIRSIIGPNGAGKSSMLNCING CCCCCCCCCCEEEEEEEEEEEECCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHC VYAPQEGSITFRGKTFAHMNSRQVAEMGVARTFQNLALFKGMSVLDNIMSGRNLKIRSNL CCCCCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHH LMQALRLGPAVAEEIRHREVVERIIDFLEIQAWRKAPVGQLPYGLQKRVDLGRALAMEPQ HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC VLLLDEPMAGMNVEEKQDMCRFILDVNDEFGTTIVLIEHDMGVVMDISDRVVVLDYGKKI EEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCEEEEECCCCC GDGTPQAVRENEDVIRAYLGAGH CCCCHHHHHCCHHHHHHHHCCCC >Mature Secondary Structure TTPSKKTGDVILDVRNISLRFGGVKALTDISFDVREHEIRSIIGPNGAGKSSMLNCING CCCCCCCCCEEEEEEEEEEEECCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHC VYAPQEGSITFRGKTFAHMNSRQVAEMGVARTFQNLALFKGMSVLDNIMSGRNLKIRSNL CCCCCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHH LMQALRLGPAVAEEIRHREVVERIIDFLEIQAWRKAPVGQLPYGLQKRVDLGRALAMEPQ HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC VLLLDEPMAGMNVEEKQDMCRFILDVNDEFGTTIVLIEHDMGVVMDISDRVVVLDYGKKI EEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCEEEEECCCCC GDGTPQAVRENEDVIRAYLGAGH CCCCHHHHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]