The gene/protein map for NC_008752 is currently unavailable.
Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120609426

Identifier: 120609426

GI number: 120609426

Start: 784500

End: 785243

Strand: Direct

Name: 120609426

Synonym: Aave_0730

Alternate gene names: NA

Gene position: 784500-785243 (Clockwise)

Preceding gene: 120609425

Following gene: 120609427

Centisome position: 14.66

GC content: 63.84

Gene sequence:

>744_bases
ATGAAGACCCAATTCCGTTTGCTGTCCGTCTCGCTCGCCGCCGTGCTGTCGGTATCGCTGCTGGCCTCACAACCTGCGTC
CGCGCTGACGGTGTTCGACCCGTCCAACTTCGTGCAGAACACGCTGACCGCCGTGCGCACGCTGGAGCAGATCAACAACC
AGATCAACCAGCTTCAGAACGAAGCGCAGATGCTGATGAACCAGGCGCGCAATCTGGCGAATCTGGACTTCAACATCGTC
AATCGCCTGCGTTCGACGCTGGCGACCACCGAACGCCTGATCGCCGAGGCGCGCGGCCTGGCCTACGACGTGCAGAGCAT
GGATTCCACCTTCGCCCGGCTGTACCCGGAGCAGTACGCCGCGACCGTCAGCGGCGACCAGATGCTGCGCGACGCGCAGG
AACGCTGGAAGAACACCTTGAATGGTCTGCATACCGCGATGCGGATGCAGGCGCAGGTGTCGCAGAACCTGGCCCAAGAC
GAAAGCGCACTGTCCGATCTGGTCAGCCAGAGTCAGTCCGCCACCGGCGCGCTGCAAGCCATGCAGGCGACCAACCAGCT
TCTGGCCTTGCAGGCCAAGCAGTCCATCCAGGCGCAGCAGCTCCAGATCACGCAGGAACGCGCCGCCGCGCTGGAACTGG
CACGCCAAGCGGCGGCAGTCGAACGTGGCCGTGAAGTGACGCGCCGCTTCCTGGGTGATGGCACGCCCTACACGCCGCAG
CGCGTGGATTTCTACGGTAACTGA

Upstream 100 bases:

>100_bases
CGTGGCTGCGCCATCGTGGCCTCGATTGGGCCGCTGATCTGCTGCCGTCCTCGCCGGCGGCAGCTTCTTTCCTCGCTTCT
CAACGACCGGAGGTTTCACC

Downstream 100 bases:

>100_bases
CGGGAGACGGCCATGCGATGCGTTTCCTTGTTGCTGCCTGTGCTGCTGGTCGCTTGCAGCCAACAGCCGACCGAAGACCT
GGCCGCTGCCCTGGCCGCCG

Product: conjugal transfer protein TrbJ

Products: NA

Alternate protein names: P-Type Conjugative Transfer Protein TrbJ; Conjugal Transfer TrbJ Signal Peptide Protein; Conjugal Transfer Protein Trbj; Conjugal Transfer Protein; P-Type Conjugative Transfer Protein Trbj; Conjugative Transfer Protein TrbJ

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKTQFRLLSVSLAAVLSVSLLASQPASALTVFDPSNFVQNTLTAVRTLEQINNQINQLQNEAQMLMNQARNLANLDFNIV
NRLRSTLATTERLIAEARGLAYDVQSMDSTFARLYPEQYAATVSGDQMLRDAQERWKNTLNGLHTAMRMQAQVSQNLAQD
ESALSDLVSQSQSATGALQAMQATNQLLALQAKQSIQAQQLQITQERAAALELARQAAAVERGREVTRRFLGDGTPYTPQ
RVDFYGN

Sequences:

>Translated_247_residues
MKTQFRLLSVSLAAVLSVSLLASQPASALTVFDPSNFVQNTLTAVRTLEQINNQINQLQNEAQMLMNQARNLANLDFNIV
NRLRSTLATTERLIAEARGLAYDVQSMDSTFARLYPEQYAATVSGDQMLRDAQERWKNTLNGLHTAMRMQAQVSQNLAQD
ESALSDLVSQSQSATGALQAMQATNQLLALQAKQSIQAQQLQITQERAAALELARQAAAVERGREVTRRFLGDGTPYTPQ
RVDFYGN
>Mature_247_residues
MKTQFRLLSVSLAAVLSVSLLASQPASALTVFDPSNFVQNTLTAVRTLEQINNQINQLQNEAQMLMNQARNLANLDFNIV
NRLRSTLATTERLIAEARGLAYDVQSMDSTFARLYPEQYAATVSGDQMLRDAQERWKNTLNGLHTAMRMQAQVSQNLAQD
ESALSDLVSQSQSATGALQAMQATNQLLALQAKQSIQAQQLQITQERAAALELARQAAAVERGREVTRRFLGDGTPYTPQ
RVDFYGN

Specific function: Unknown

COG id: COG5314

COG function: function code U; Conjugal transfer/entry exclusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27307; Mature: 27307

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCC
>Mature Secondary Structure
MKTQFRLLSVSLAAVLSVSLLASQPASALTVFDPSNFVQNTLTAVRTLEQINNQINQLQN
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
EAQMLMNQARNLANLDFNIVNRLRSTLATTERLIAEARGLAYDVQSMDSTFARLYPEQYA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATVSGDQMLRDAQERWKNTLNGLHTAMRMQAQVSQNLAQDESALSDLVSQSQSATGALQA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQATNQLLALQAKQSIQAQQLQITQERAAALELARQAAAVERGREVTRRFLGDGTPYTPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RVDFYGN
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA