| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609427
Identifier: 120609427
GI number: 120609427
Start: 785256
End: 785570
Strand: Direct
Name: 120609427
Synonym: Aave_0731
Alternate gene names: NA
Gene position: 785256-785570 (Clockwise)
Preceding gene: 120609426
Following gene: 120609428
Centisome position: 14.67
GC content: 67.62
Gene sequence:
>315_bases ATGCGATGCGTTTCCTTGTTGCTGCCTGTGCTGCTGGTCGCTTGCAGCCAACAGCCGACCGAAGACCTGGCCGCTGCCCT GGCCGCCGATCCCATGCGGCTCAAGGCTTTGCGTGCGCAGGGTGCCGCCGACAGGACGGTCGCAGGCGAAGACGCCTGCC TGGCCGCGGCCGACGCTTTCCGGCGGCGCTTCTTCGCCGGTGAAACCGGGCCTGATGAGTTCCGCACGCTGGCCGATCTG CCGCCGATCCCGCCGAGCTTCGACATACCCATCAGTGACCAGGACGCCATGCCCTTCGAGGGGGACGTGCCATGA
Upstream 100 bases:
>100_bases AGTCGAACGTGGCCGTGAAGTGACGCGCCGCTTCCTGGGTGATGGCACGCCCTACACGCCGCAGCGCGTGGATTTCTACG GTAACTGACGGGAGACGGCC
Downstream 100 bases:
>100_bases ATGACGTGACAGTGATCGACCGCTTCCTCGATACCTTCTCGCGCTACATCGACTCGGGCTTTGGGCTGCTGCAGGGCGAA GTCGCGTTCCTCACCGCCAC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MRCVSLLLPVLLVACSQQPTEDLAAALAADPMRLKALRAQGAADRTVAGEDACLAAADAFRRRFFAGETGPDEFRTLADL PPIPPSFDIPISDQDAMPFEGDVP
Sequences:
>Translated_104_residues MRCVSLLLPVLLVACSQQPTEDLAAALAADPMRLKALRAQGAADRTVAGEDACLAAADAFRRRFFAGETGPDEFRTLADL PPIPPSFDIPISDQDAMPFEGDVP >Mature_104_residues MRCVSLLLPVLLVACSQQPTEDLAAALAADPMRLKALRAQGAADRTVAGEDACLAAADAFRRRFFAGETGPDEFRTLADL PPIPPSFDIPISDQDAMPFEGDVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11056; Mature: 11056
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCVSLLLPVLLVACSQQPTEDLAAALAADPMRLKALRAQGAADRTVAGEDACLAAADAF CHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH RRRFFAGETGPDEFRTLADLPPIPPSFDIPISDQDAMPFEGDVP HHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRCVSLLLPVLLVACSQQPTEDLAAALAADPMRLKALRAQGAADRTVAGEDACLAAADAF CHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH RRRFFAGETGPDEFRTLADLPPIPPSFDIPISDQDAMPFEGDVP HHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA