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The map label for this gene is trbE [H]

Identifier: 120609425

GI number: 120609425

Start: 782053

End: 784503

Strand: Direct

Name: trbE [H]

Synonym: Aave_0729

Alternate gene names: 120609425

Gene position: 782053-784503 (Clockwise)

Preceding gene: 120609424

Following gene: 120609426

Centisome position: 14.61

GC content: 65.44

Gene sequence:

>2451_bases
ATGCTGAACCTTGCCGAATACCACCAGCGGCCCGCGCTGCTGGCCGACTGGTTGCCCTGGGCCGGGCTGATCGCGCCGGG
CGTGGTACTGAACAAGGATGGCTCGTTCCAGCGCACGGCACGTTTTCGTGGGCCGGATCTGGACAGCGCGACGCAAGGCG
AGCTGATCGCCACGTCGGCGCGGCTCAACAACGCGCTGCGTCGCCTGGGATCGGGCTGGGCCTTGTTTATCGAAGCTGAG
CGCCGCGCAGCGGCGGGCTATCCACGTTCCGACTTCCCCGAACCGTTGTCCTGGCTGGTGGAGGAAGAACGCCGCGCGGC
TTTCGAGGAATCCGGCCATCACTACGAGAGCGCCTATCACCTCACGCTGGCATATCTGCCACCAGAAGAATCCCGCGCCC
GCGCTGCCAAGATGCTCTATGAGAACGCGCCGGGCGACGGTGTGGACTGGCAGGGTCGGCTGGAAGCCTTCGTGGCTGAA
ACGGATCGAGTGTTCGACCTGCTCGACGGCGTCAAGCCAGAGATTGCCTGGCTGGATGACGCGCAGACACTGACCTACCT
GCACGCCACGGTGTCCACGCGGCGCTACCGCGTCGGCGTGCCCGACGTGCCATTCCACATCGACGCGCTGCTGGCCGATT
CCGCCCTGGTCGGTGGCCTGGCTCCCATGCTGGGCGACCGGCATCTACGCGTGGTGTCGGTGCGAGGATTTCCGACCTCA
ACCTGGCCGGGGATTCTGGACGACCTCAACCGCTTGGGCTTCGGCTACCGCTGGAGCACGCGCTTTTTGTGCCTGGACAA
AGCCGAGGCGGAAAAAGAACTGGGCCGTCTGCGCCGCCAGTGGTTCGCCAAGCGCAAGAACGTCGTCGCGCTGCTGCGCG
AAACGATCTTCCAGCAGGAAAGCCCGCTGGTCGATACCGACGCCAACAACAAAGCCGCCGATGCGGATGCCGCCTTGCAG
GAGCTGGGCAGCGATCAAGTTGCCTTCGGCTACCTGACGGCCACCGTCGCCGTCATGGATGCCGATGCCGCCGTGGCCGA
CGAGAAGCTGCGGATGGTGGAGCGCGTCATCCAGGGGCGCGGCTTCGTCACCATCCCCGAAACCTTAAACGCCGTGGATG
CCTGGCTGTCGTCCATTCCCGGCAACGCCTATGCCAACGTGCGCCAGCCCATCGTCTCGACGCTGAATCTGGCGCACCTG
ATGCCGGTGTCTGCCGTTTGGGCCGGGCCGGAGAAGAACGCGCATCTGGATGGCCCGCCGCTGATCGTCACCCGCACCGA
TGGCGCGACGCCGTTCCGGCTGGTGACGCATATCGGCGACGTGGGCCACACGCTGGTTGCCGGGCCGACCGGCATGGGCA
AGTCGGTCTTGCTCGCCACGCTGGCAATGCAGTTTCGCCGCTATCCCGGCTCGCGCATCTTCGCCTTCGACATGGGCCGC
TCGATGCGCGCCACCATCCTGGGGCTGGGCGGCGAGCATTACGACCTCGGCAACGATGGGGCGATCGCCTTCCAGCCACT
GGCCCGCATCGACCAGGAGGGCTACCGCACCTGGGCCGCTGAGTGGGTGGAAGGTCGCCTGCTGCATGAAGGTGTTGCCA
TCGGCCCGGACGAGAAGGCCGCGATCTGGTCAGCACTCGGCAGCCTCGCTGGTGCGCCGGTCGGGCAGCGCACGCTGACG
GGTCTGTCGGTGCTGTTGCAGTCGAACGCACTGCGCCAGGCGCTCGCGCCCTATGTGCTGGGTGGTGCCCACGGCAAGCT
GCTGGATGCCGATGCCGACCGCCTGGGTTCCGGCAGCGTGCAGGGCTTCGAGATGGAAGAACTGATGCACAGCAAAGCGG
CGGTGCTGGCCGTGCTGGGCTACCTGTTCGCCCGCTTCGATGAACGCTTCGACGGCGCGCCCACGCTGCTGATCCTCGAT
GAAGCCTGGTTGTTTCTCGATGACCCGGTGTTCGCCGCCCGCATCCGCCAGTGGCTCAAGACACTGCGCAAGAAAAACGT
CAGTGTCATCTTCGCCACGCAATCGTTGGCTGACATCAAGGATTCGAGCATTGCCCCGGCGGTGATCGAAAGCTGCGCGA
GTCGCATTTTCCTCCCCAATCCGCAGGCCACAGAGCCGCATATCCGCACGATCTACGAAGGCTTCGGGCTGAACGCGCGC
CAGATCGAGATCGTGGCGACCGCGCAGCCCAAGCGTGACTACTACTACCAATCGCGCATGGGCAATCGTCTGTTCGACCT
CGACCTGGGGCCAGCCACGTTGGCTTTCGCCGGGGCATCCACCCCACAAGACCAACGCGATATAGATCGCGTGCTGTTGG
ACGCAGGCACACCGGGCTTCGCCGGTGCGTGGCTGCGCCATCGTGGCCTCGATTGGGCCGCTGATCTGCTGCCGTCCTCG
CCGGCGGCAGCTTCTTTCCTCGCTTCTCAACGACCGGAGGTTTCACCATGA

Upstream 100 bases:

>100_bases
GCTGGCGGTGTGGGGTGCTCGTGTCGATCCGCAGTTCATGCAGGTCTTCGCTCGGCACATCAAGCACAAGCCGCTACTGG
ACGTATAGGGAGAAGCCGAC

Downstream 100 bases:

>100_bases
AGACCCAATTCCGTTTGCTGTCCGTCTCGCTCGCCGCCGTGCTGTCGGTATCGCTGCTGGCCTCACAACCTGCGTCCGCG
CTGACGGTGTTCGACCCGTC

Product: conjugal transfer ATPase TrbE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 816; Mature: 816

Protein sequence:

>816_residues
MLNLAEYHQRPALLADWLPWAGLIAPGVVLNKDGSFQRTARFRGPDLDSATQGELIATSARLNNALRRLGSGWALFIEAE
RRAAAGYPRSDFPEPLSWLVEEERRAAFEESGHHYESAYHLTLAYLPPEESRARAAKMLYENAPGDGVDWQGRLEAFVAE
TDRVFDLLDGVKPEIAWLDDAQTLTYLHATVSTRRYRVGVPDVPFHIDALLADSALVGGLAPMLGDRHLRVVSVRGFPTS
TWPGILDDLNRLGFGYRWSTRFLCLDKAEAEKELGRLRRQWFAKRKNVVALLRETIFQQESPLVDTDANNKAADADAALQ
ELGSDQVAFGYLTATVAVMDADAAVADEKLRMVERVIQGRGFVTIPETLNAVDAWLSSIPGNAYANVRQPIVSTLNLAHL
MPVSAVWAGPEKNAHLDGPPLIVTRTDGATPFRLVTHIGDVGHTLVAGPTGMGKSVLLATLAMQFRRYPGSRIFAFDMGR
SMRATILGLGGEHYDLGNDGAIAFQPLARIDQEGYRTWAAEWVEGRLLHEGVAIGPDEKAAIWSALGSLAGAPVGQRTLT
GLSVLLQSNALRQALAPYVLGGAHGKLLDADADRLGSGSVQGFEMEELMHSKAAVLAVLGYLFARFDERFDGAPTLLILD
EAWLFLDDPVFAARIRQWLKTLRKKNVSVIFATQSLADIKDSSIAPAVIESCASRIFLPNPQATEPHIRTIYEGFGLNAR
QIEIVATAQPKRDYYYQSRMGNRLFDLDLGPATLAFAGASTPQDQRDIDRVLLDAGTPGFAGAWLRHRGLDWAADLLPSS
PAAASFLASQRPEVSP

Sequences:

>Translated_816_residues
MLNLAEYHQRPALLADWLPWAGLIAPGVVLNKDGSFQRTARFRGPDLDSATQGELIATSARLNNALRRLGSGWALFIEAE
RRAAAGYPRSDFPEPLSWLVEEERRAAFEESGHHYESAYHLTLAYLPPEESRARAAKMLYENAPGDGVDWQGRLEAFVAE
TDRVFDLLDGVKPEIAWLDDAQTLTYLHATVSTRRYRVGVPDVPFHIDALLADSALVGGLAPMLGDRHLRVVSVRGFPTS
TWPGILDDLNRLGFGYRWSTRFLCLDKAEAEKELGRLRRQWFAKRKNVVALLRETIFQQESPLVDTDANNKAADADAALQ
ELGSDQVAFGYLTATVAVMDADAAVADEKLRMVERVIQGRGFVTIPETLNAVDAWLSSIPGNAYANVRQPIVSTLNLAHL
MPVSAVWAGPEKNAHLDGPPLIVTRTDGATPFRLVTHIGDVGHTLVAGPTGMGKSVLLATLAMQFRRYPGSRIFAFDMGR
SMRATILGLGGEHYDLGNDGAIAFQPLARIDQEGYRTWAAEWVEGRLLHEGVAIGPDEKAAIWSALGSLAGAPVGQRTLT
GLSVLLQSNALRQALAPYVLGGAHGKLLDADADRLGSGSVQGFEMEELMHSKAAVLAVLGYLFARFDERFDGAPTLLILD
EAWLFLDDPVFAARIRQWLKTLRKKNVSVIFATQSLADIKDSSIAPAVIESCASRIFLPNPQATEPHIRTIYEGFGLNAR
QIEIVATAQPKRDYYYQSRMGNRLFDLDLGPATLAFAGASTPQDQRDIDRVLLDAGTPGFAGAWLRHRGLDWAADLLPSS
PAAASFLASQRPEVSP
>Mature_816_residues
MLNLAEYHQRPALLADWLPWAGLIAPGVVLNKDGSFQRTARFRGPDLDSATQGELIATSARLNNALRRLGSGWALFIEAE
RRAAAGYPRSDFPEPLSWLVEEERRAAFEESGHHYESAYHLTLAYLPPEESRARAAKMLYENAPGDGVDWQGRLEAFVAE
TDRVFDLLDGVKPEIAWLDDAQTLTYLHATVSTRRYRVGVPDVPFHIDALLADSALVGGLAPMLGDRHLRVVSVRGFPTS
TWPGILDDLNRLGFGYRWSTRFLCLDKAEAEKELGRLRRQWFAKRKNVVALLRETIFQQESPLVDTDANNKAADADAALQ
ELGSDQVAFGYLTATVAVMDADAAVADEKLRMVERVIQGRGFVTIPETLNAVDAWLSSIPGNAYANVRQPIVSTLNLAHL
MPVSAVWAGPEKNAHLDGPPLIVTRTDGATPFRLVTHIGDVGHTLVAGPTGMGKSVLLATLAMQFRRYPGSRIFAFDMGR
SMRATILGLGGEHYDLGNDGAIAFQPLARIDQEGYRTWAAEWVEGRLLHEGVAIGPDEKAAIWSALGSLAGAPVGQRTLT
GLSVLLQSNALRQALAPYVLGGAHGKLLDADADRLGSGSVQGFEMEELMHSKAAVLAVLGYLFARFDERFDGAPTLLILD
EAWLFLDDPVFAARIRQWLKTLRKKNVSVIFATQSLADIKDSSIAPAVIESCASRIFLPNPQATEPHIRTIYEGFGLNAR
QIEIVATAQPKRDYYYQSRMGNRLFDLDLGPATLAFAGASTPQDQRDIDRVLLDAGTPGFAGAWLRHRGLDWAADLLPSS
PAAASFLASQRPEVSP

Specific function: Unknown

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbE/virB4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004346
- InterPro:   IPR018145 [H]

Pfam domain/function: PF03135 CagE_TrbE_VirB [H]

EC number: NA

Molecular weight: Translated: 89240; Mature: 89240

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLAEYHQRPALLADWLPWAGLIAPGVVLNKDGSFQRTARFRGPDLDSATQGELIATSA
CCCHHHHHCCCCHHHHHCCHHHHHCCCEEECCCCCCHHHHHCCCCCCCCCCCCCEEEHHH
RLNNALRRLGSGWALFIEAERRAAAGYPRSDFPEPLSWLVEEERRAAFEESGHHYESAYH
HHHHHHHHHCCCEEEEEEECCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE
LTLAYLPPEESRARAAKMLYENAPGDGVDWQGRLEAFVAETDRVFDLLDGVKPEIAWLDD
EEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCC
AQTLTYLHATVSTRRYRVGVPDVPFHIDALLADSALVGGLAPMLGDRHLRVVSVRGFPTS
CHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
TWPGILDDLNRLGFGYRWSTRFLCLDKAEAEKELGRLRRQWFAKRKNVVALLRETIFQQE
CCCHHHHHHHHCCCCEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPLVDTDANNKAADADAALQELGSDQVAFGYLTATVAVMDADAAVADEKLRMVERVIQGR
CCCCCCCCCCCCCHHHHHHHHCCCCCEEHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCC
GFVTIPETLNAVDAWLSSIPGNAYANVRQPIVSTLNLAHLMPVSAVWAGPEKNAHLDGPP
CCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCCCCCCC
LIVTRTDGATPFRLVTHIGDVGHTLVAGPTGMGKSVLLATLAMQFRRYPGSRIFAFDMGR
EEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
SMRATILGLGGEHYDLGNDGAIAFQPLARIDQEGYRTWAAEWVEGRLLHEGVAIGPDEKA
CCEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCHHHHCCCEECCCCHH
AIWSALGSLAGAPVGQRTLTGLSVLLQSNALRQALAPYVLGGAHGKLLDADADRLGSGSV
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHCCCCCC
QGFEMEELMHSKAAVLAVLGYLFARFDERFDGAPTLLILDEAWLFLDDPVFAARIRQWLK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCHHHHHHHHHHH
TLRKKNVSVIFATQSLADIKDSSIAPAVIESCASRIFLPNPQATEPHIRTIYEGFGLNAR
HHHHCCCEEEEEECHHHHCCCCCCCHHHHHHHHHCEECCCCCCCCCHHHHHHHHCCCCCE
QIEIVATAQPKRDYYYQSRMGNRLFDLDLGPATLAFAGASTPQDQRDIDRVLLDAGTPGF
EEEEEEECCCCHHHHHHHHCCCEEEEECCCCHHEEECCCCCCCHHHHHHHHHHHCCCCCH
AGAWLRHRGLDWAADLLPSSPAAASFLASQRPEVSP
HHHHHHHCCCCHHHHHCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLNLAEYHQRPALLADWLPWAGLIAPGVVLNKDGSFQRTARFRGPDLDSATQGELIATSA
CCCHHHHHCCCCHHHHHCCHHHHHCCCEEECCCCCCHHHHHCCCCCCCCCCCCCEEEHHH
RLNNALRRLGSGWALFIEAERRAAAGYPRSDFPEPLSWLVEEERRAAFEESGHHYESAYH
HHHHHHHHHCCCEEEEEEECCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE
LTLAYLPPEESRARAAKMLYENAPGDGVDWQGRLEAFVAETDRVFDLLDGVKPEIAWLDD
EEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCC
AQTLTYLHATVSTRRYRVGVPDVPFHIDALLADSALVGGLAPMLGDRHLRVVSVRGFPTS
CHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
TWPGILDDLNRLGFGYRWSTRFLCLDKAEAEKELGRLRRQWFAKRKNVVALLRETIFQQE
CCCHHHHHHHHCCCCEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SPLVDTDANNKAADADAALQELGSDQVAFGYLTATVAVMDADAAVADEKLRMVERVIQGR
CCCCCCCCCCCCCHHHHHHHHCCCCCEEHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCC
GFVTIPETLNAVDAWLSSIPGNAYANVRQPIVSTLNLAHLMPVSAVWAGPEKNAHLDGPP
CCEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHEECCCCCCCCCCCCC
LIVTRTDGATPFRLVTHIGDVGHTLVAGPTGMGKSVLLATLAMQFRRYPGSRIFAFDMGR
EEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
SMRATILGLGGEHYDLGNDGAIAFQPLARIDQEGYRTWAAEWVEGRLLHEGVAIGPDEKA
CCEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCHHHHCCCEECCCCHH
AIWSALGSLAGAPVGQRTLTGLSVLLQSNALRQALAPYVLGGAHGKLLDADADRLGSGSV
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHCCCCCC
QGFEMEELMHSKAAVLAVLGYLFARFDERFDGAPTLLILDEAWLFLDDPVFAARIRQWLK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCHHHHHHHHHHH
TLRKKNVSVIFATQSLADIKDSSIAPAVIESCASRIFLPNPQATEPHIRTIYEGFGLNAR
HHHHCCCEEEEEECHHHHCCCCCCCHHHHHHHHHCEECCCCCCCCCHHHHHHHHCCCCCE
QIEIVATAQPKRDYYYQSRMGNRLFDLDLGPATLAFAGASTPQDQRDIDRVLLDAGTPGF
EEEEEEECCCCHHHHHHHHCCCEEEEECCCCHHEEECCCCCCCHHHHHHHHHHHCCCCCH
AGAWLRHRGLDWAADLLPSSPAAASFLASQRPEVSP
HHHHHHHCCCCHHHHHCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]