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The map label for this gene is 120609153

Identifier: 120609153

GI number: 120609153

Start: 486205

End: 487263

Strand: Reverse

Name: 120609153

Synonym: Aave_0450

Alternate gene names: NA

Gene position: 487263-486205 (Counterclockwise)

Preceding gene: 120609154

Following gene: 120609152

Centisome position: 9.1

GC content: 75.83

Gene sequence:

>1059_bases
GTGCCCCCCGGCGAGGCGCATCTGGCGCGCATCGCCTTCGACCGCCGCTTCGCCCGCTGGGCGGCCCGGCTCTGCAGCCA
GCCGCCCGGCCGCGTGGCAGCCGCCGCGCCGGGCTGCCACCACGACGCGGTGTCGCTGGATTTCTCCTGCGTGCATGGCC
ACCTGCAGGTCTCCGTGCCCCTGTCGGCCTGGCCGACGCTCGGCATGGCGGCCCGCCTGGCGGATGCCGCGCTGGCCCGC
GAAGTGGCGGAAACCCTGATCGCCGCCCCCCTTGCCGCCGTGGCGCCGGTGCTGCCGGGGCTCGCACTGACCGGCGTGTC
CGTGCGCACCGCCCTGCAGGCGCCGCTGGAATGGACCCAGGGCGCCATGCGCATCGGCCTGCACGCCATCGACGGCGGCG
TGGCGGATCGGCTGTGCGCCCACCTGGCGCATTCCGCGCAGGCCGACGGCGAGCCCCTGGCCGCGCTGCGGCTGCCGGGC
ACCGTCCGCCTCGCCACCCGCCGCCTCGCGCCCGCCGACCTCGCCAGCCTGGCTGCGGGCGACGTCGTCTTGTGCGGCAC
GCTCTCCGCGGGCCGGCGGCGCCTTTGCCATCTTTCCTTCGGACTGGGAACCACCATGCACATACCCGCAGAACTCGATC
TCGACGATTCCGAAATCGCCCTCCACGCCGCGCCGCAGGCCGATGCCTTCGCGGAGCCGGCGGACGAAGACGGCGCGCCG
GACCCGGCCGGCGCCGCCGAGGAAGCCGCGCCGTGTTCCGGCAGCGATGCCGAACCCGAGGCCACGCCGCTGCCGCTGAC
CGACATCGGCGGCATCCGCGTTCCCGTCGCCATCGAGATCGACACCGCGCGCATCCGGCTGGACGAACTCGCCGCGCTCG
ATGCCGGCGCCATCGTCCCGCTCGCCGTCGCCGCCCGCGACGCCACAGTCCGCCTGGTCTGCCACGGCCAGGTCGTGGGC
ACCGGCCGCCTGGTCGTCATCGGCGATCACCTGGGCGTGCGCATCGCGCACATGGCGGCGGCCGGCGCAGCGTCGCCCAC
GGCCACAGGCGCGCCATGA

Upstream 100 bases:

>100_bases
CCGGGCAGCGCGGCATCGACATCGACCTGGAATCACCGCCGTGAACGCACTTGCGCCCCACTCCGCCATCACCGCCGAAC
TGGCCGACCGCCTGCCGATC

Downstream 100 bases:

>100_bases
CCCCGATCTCGGGACTCGATCCCGTCTCGCTGGCGCTGGCGCTGATGCTGCTGGCGGTGCTGCCGTTCGCCGCCATGATC
GTCACGTCCTACACCAAGGT

Product: type III secretion system apparatus protein YscQ/HrcQ

Products: NA

Alternate protein names: Surface Presentation Of Antigens Domain-Containing Protein; Type III Secretion Inner Membrane Protein SctQ

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MPPGEAHLARIAFDRRFARWAARLCSQPPGRVAAAAPGCHHDAVSLDFSCVHGHLQVSVPLSAWPTLGMAARLADAALAR
EVAETLIAAPLAAVAPVLPGLALTGVSVRTALQAPLEWTQGAMRIGLHAIDGGVADRLCAHLAHSAQADGEPLAALRLPG
TVRLATRRLAPADLASLAAGDVVLCGTLSAGRRRLCHLSFGLGTTMHIPAELDLDDSEIALHAAPQADAFAEPADEDGAP
DPAGAAEEAAPCSGSDAEPEATPLPLTDIGGIRVPVAIEIDTARIRLDELAALDAGAIVPLAVAARDATVRLVCHGQVVG
TGRLVVIGDHLGVRIAHMAAAGAASPTATGAP

Sequences:

>Translated_352_residues
MPPGEAHLARIAFDRRFARWAARLCSQPPGRVAAAAPGCHHDAVSLDFSCVHGHLQVSVPLSAWPTLGMAARLADAALAR
EVAETLIAAPLAAVAPVLPGLALTGVSVRTALQAPLEWTQGAMRIGLHAIDGGVADRLCAHLAHSAQADGEPLAALRLPG
TVRLATRRLAPADLASLAAGDVVLCGTLSAGRRRLCHLSFGLGTTMHIPAELDLDDSEIALHAAPQADAFAEPADEDGAP
DPAGAAEEAAPCSGSDAEPEATPLPLTDIGGIRVPVAIEIDTARIRLDELAALDAGAIVPLAVAARDATVRLVCHGQVVG
TGRLVVIGDHLGVRIAHMAAAGAASPTATGAP
>Mature_351_residues
PPGEAHLARIAFDRRFARWAARLCSQPPGRVAAAAPGCHHDAVSLDFSCVHGHLQVSVPLSAWPTLGMAARLADAALARE
VAETLIAAPLAAVAPVLPGLALTGVSVRTALQAPLEWTQGAMRIGLHAIDGGVADRLCAHLAHSAQADGEPLAALRLPGT
VRLATRRLAPADLASLAAGDVVLCGTLSAGRRRLCHLSFGLGTTMHIPAELDLDDSEIALHAAPQADAFAEPADEDGAPD
PAGAAEEAAPCSGSDAEPEATPLPLTDIGGIRVPVAIEIDTARIRLDELAALDAGAIVPLAVAARDATVRLVCHGQVVGT
GRLVVIGDHLGVRIAHMAAAGAASPTATGAP

Specific function: Unknown

COG id: COG1886

COG function: function code NU; Flagellar motor switch/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35716; Mature: 35585

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPGEAHLARIAFDRRFARWAARLCSQPPGRVAAAAPGCHHDAVSLDFSCVHGHLQVSVP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEEEECEEEEEEC
LSAWPTLGMAARLADAALAREVAETLIAAPLAAVAPVLPGLALTGVSVRTALQAPLEWTQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHCCHHHHC
GAMRIGLHAIDGGVADRLCAHLAHSAQADGEPLAALRLPGTVRLATRRLAPADLASLAAG
CHHHHEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEHHHHCCHHHHHHHCCC
DVVLCGTLSAGRRRLCHLSFGLGTTMHIPAELDLDDSEIALHAAPQADAFAEPADEDGAP
CEEEEECCHHCCCEEEEEEECCCCEEECCEECCCCCCCEEEEECCCCCCCCCCCCCCCCC
DPAGAAEEAAPCSGSDAEPEATPLPLTDIGGIRVPVAIEIDTARIRLDELAALDAGAIVP
CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHEEEHHHHHHCCCCCCEE
LAVAARDATVRLVCHGQVVGTGRLVVIGDHLGVRIAHMAAAGAASPTATGAP
EEEEECCCEEEEEEECEEECCCEEEEEECCCCEEEEHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PPGEAHLARIAFDRRFARWAARLCSQPPGRVAAAAPGCHHDAVSLDFSCVHGHLQVSVP
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEEEECEEEEEEC
LSAWPTLGMAARLADAALAREVAETLIAAPLAAVAPVLPGLALTGVSVRTALQAPLEWTQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHCCHHHHC
GAMRIGLHAIDGGVADRLCAHLAHSAQADGEPLAALRLPGTVRLATRRLAPADLASLAAG
CHHHHEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEHHHHCCHHHHHHHCCC
DVVLCGTLSAGRRRLCHLSFGLGTTMHIPAELDLDDSEIALHAAPQADAFAEPADEDGAP
CEEEEECCHHCCCEEEEEEECCCCEEECCEECCCCCCCEEEEECCCCCCCCCCCCCCCCC
DPAGAAEEAAPCSGSDAEPEATPLPLTDIGGIRVPVAIEIDTARIRLDELAALDAGAIVP
CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHEEEHHHHHHCCCCCCEE
LAVAARDATVRLVCHGQVVGTGRLVVIGDHLGVRIAHMAAAGAASPTATGAP
EEEEECCCEEEEEEECEEECCCEEEEEECCCCEEEEHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA