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The map label for this gene is hrcR [H]

Identifier: 120609152

GI number: 120609152

Start: 485546

End: 486208

Strand: Reverse

Name: hrcR [H]

Synonym: Aave_0449

Alternate gene names: 120609152

Gene position: 486208-485546 (Counterclockwise)

Preceding gene: 120609153

Following gene: 120609151

Centisome position: 9.08

GC content: 65.31

Gene sequence:

>663_bases
ATGACCCCGATCTCGGGACTCGATCCCGTCTCGCTGGCGCTGGCGCTGATGCTGCTGGCGGTGCTGCCGTTCGCCGCCAT
GATCGTCACGTCCTACACCAAGGTGGTGGTGGTCCTGGGCCTGCTGCGCAACGCGCTCGGCGTGCAGCAGGTGCCGCCCA
ACATGGTGCTCAACGGCATCGCCATCATCATTTCGGTGTACGTGATGGCGCCGGTCGCCATGGAGGCTTCCGACCGCATG
CAGATGCTGCCGCCTTCCGCCCAAAGCTCCAACACCCAGCAGATGCTCGCTGCCGCCTCCGCCGCCCGTGAACCGTTCCG
CAAGTTCCTGGACAAGCATGCCGACGCCGCCGAGAAAGCGTTCTTCCTCAAGTCGGCCCAGGCGCTCTGGCCCGAGGAAC
GCGCCCGGTCGCTGCAGGCCGACGACCTCGTCGTGCTGGCGCCCGCCTTCCTGCTCACCGAACTCACGGCCGCCTTCCGC
ATCGGTTTCCTGCTGTACCTGGCCTTCATCATCGTGGAGCTGGTCATCGCCAACGTCCTGCTGGCCATGGGCCTATCCCA
GGTTTCCCCCACCAACGTCGCCATTCCCTTCAAGCTGCTGCTGTTCGTCGTGCTCGACGGATGGTCGCAGGTGATGCACG
GACTGGTCATGACCTACCGCTGA

Upstream 100 bases:

>100_bases
TGGGCACCGGCCGCCTGGTCGTCATCGGCGATCACCTGGGCGTGCGCATCGCGCACATGGCGGCGGCCGGCGCAGCGTCG
CCCACGGCCACAGGCGCGCC

Downstream 100 bases:

>100_bases
ACACGCAGGGCACGCCATGAACCACGACAACATCGTCCAGCTCACCTCCGAAGCACTCATGCTGTGCCTGCTGCTGTCGC
TGCCGGCCGTGGCCGTCGCG

Product: type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTPISGLDPVSLALALMLLAVLPFAAMIVTSYTKVVVVLGLLRNALGVQQVPPNMVLNGIAIIISVYVMAPVAMEASDRM
QMLPPSAQSSNTQQMLAAASAAREPFRKFLDKHADAAEKAFFLKSAQALWPEERARSLQADDLVVLAPAFLLTELTAAFR
IGFLLYLAFIIVELVIANVLLAMGLSQVSPTNVAIPFKLLLFVVLDGWSQVMHGLVMTYR

Sequences:

>Translated_220_residues
MTPISGLDPVSLALALMLLAVLPFAAMIVTSYTKVVVVLGLLRNALGVQQVPPNMVLNGIAIIISVYVMAPVAMEASDRM
QMLPPSAQSSNTQQMLAAASAAREPFRKFLDKHADAAEKAFFLKSAQALWPEERARSLQADDLVVLAPAFLLTELTAAFR
IGFLLYLAFIIVELVIANVLLAMGLSQVSPTNVAIPFKLLLFVVLDGWSQVMHGLVMTYR
>Mature_219_residues
TPISGLDPVSLALALMLLAVLPFAAMIVTSYTKVVVVLGLLRNALGVQQVPPNMVLNGIAIIISVYVMAPVAMEASDRMQ
MLPPSAQSSNTQQMLAAASAAREPFRKFLDKHADAAEKAFFLKSAQALWPEERARSLQADDLVVLAPAFLLTELTAAFRI
GFLLYLAFIIVELVIANVLLAMGLSQVSPTNVAIPFKLLLFVVLDGWSQVMHGLVMTYR

Specific function: Involved in the secretion of popA, a proteinaceous elicitor of the hypersensitivity response in plants [H]

COG id: COG4790

COG function: function code U; Type III secretory pathway, component EscR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=211, Percent_Identity=33.6492890995261, Blast_Score=130, Evalue=5e-32,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005838
- InterPro:   IPR005773 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 23811; Mature: 23680

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPISGLDPVSLALALMLLAVLPFAAMIVTSYTKVVVVLGLLRNALGVQQVPPNMVLNGI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AIIISVYVMAPVAMEASDRMQMLPPSAQSSNTQQMLAAASAAREPFRKFLDKHADAAEKA
HHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
FFLKSAQALWPEERARSLQADDLVVLAPAFLLTELTAAFRIGFLLYLAFIIVELVIANVL
HHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAMGLSQVSPTNVAIPFKLLLFVVLDGWSQVMHGLVMTYR
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPISGLDPVSLALALMLLAVLPFAAMIVTSYTKVVVVLGLLRNALGVQQVPPNMVLNGI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AIIISVYVMAPVAMEASDRMQMLPPSAQSSNTQQMLAAASAAREPFRKFLDKHADAAEKA
HHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
FFLKSAQALWPEERARSLQADDLVVLAPAFLLTELTAAFRIGFLLYLAFIIVELVIANVL
HHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAMGLSQVSPTNVAIPFKLLLFVVLDGWSQVMHGLVMTYR
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7623665; 11823852 [H]