| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609154
Identifier: 120609154
GI number: 120609154
Start: 487320
End: 488228
Strand: Reverse
Name: 120609154
Synonym: Aave_0451
Alternate gene names: NA
Gene position: 488228-487320 (Counterclockwise)
Preceding gene: 120609155
Following gene: 120609153
Centisome position: 9.12
GC content: 77.45
Gene sequence:
>909_bases GTGCAACGCGACCTCCCGCCATTGCGCCAGGGCCTGGCCAGCGGCCGCGGCACGCCCGCGGGCGCCCTGCCGCCCGCGCC CGGCGCCGCGCTCAGGTTCCAGCGCCACCTGCTGGGCGATGCGGCCGAAGACATCCCGCCGGCCACCGGCTTTCTCGCGC CCGGGCGCCGTGCGCTCGCGAGCGACCCGCGGGACCCGCGGGACCCGCTTCCTGCCGCACCGCCGCCGTCGCGGGCCACG GCCGATCCCGCGCCCGGCACGGACGGCGATGCGCCACCGCCCGCCACGTCCGCCCTGCCCGCCCCGCCCCCTCCCGTCGA CACGCCAGACCTTCCAGCCGCCTTCGGCATGCCGCGGGCCGGGGAAGCAGGCCTGCCGGCCGTCCCCGCCGCGCGACCGG ACGACGGCGCCTGCCAGGCCGGGCCCGAGGCATGTCCGCCGCCCGCCGGTCCGGCAACGGATGCCGCGGCGGTGCCCACG TGCCCTCCGCCCCCCGACCCGGTGCCGCCGCCCCCGCCCGCCTGCGGACGCCAGGACGGCGACGCATCCCGGCAACGGGG GCAGGATTCCGGAGCCGGGCCCTCGGCGGCTTCCGCCCCGGCGCGACCGGCGGCGGCCGATGCGCCCGCCTGGCTGCAGG ACACCGTGCAGCGCATCGCATGGCTGTGCGCCCAGGCGGATCCGGCCTTCCAGTCGTGGTCCGTCACGGTGCCGATGGAC CCCGCCGTGCTCCCGGAAAGCGAAGTGGCCCTCACCCTTTCGCCTTACGCGATGAGCCTTCGGTTCCGCACCCGGTCCTG CGAATCGGCACGACTAATCTCCCTCCATCGCGATCCACTGCGTGCGCAGCTCGAGGCATTGGGCCCCGGGCAGCGCGGCA TCGACATCGACCTGGAATCACCGCCGTGA
Upstream 100 bases:
>100_bases ATCGAAGGACGCATCGACTGGCTGCGCGTGTACTCCTTCCAGGAGCTGGGCAGCCTGATCGAGCTGCGGCCGATCGGCCG CGTTGCATAGCAGGCACGCC
Downstream 100 bases:
>100_bases ACGCACTTGCGCCCCACTCCGCCATCACCGCCGAACTGGCCGACCGCCTGCCGATCGTGCCCCCCGGCGAGGCGCATCTG GCGCGCATCGCCTTCGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MQRDLPPLRQGLASGRGTPAGALPPAPGAALRFQRHLLGDAAEDIPPATGFLAPGRRALASDPRDPRDPLPAAPPPSRAT ADPAPGTDGDAPPPATSALPAPPPPVDTPDLPAAFGMPRAGEAGLPAVPAARPDDGACQAGPEACPPPAGPATDAAAVPT CPPPPDPVPPPPPACGRQDGDASRQRGQDSGAGPSAASAPARPAAADAPAWLQDTVQRIAWLCAQADPAFQSWSVTVPMD PAVLPESEVALTLSPYAMSLRFRTRSCESARLISLHRDPLRAQLEALGPGQRGIDIDLESPP
Sequences:
>Translated_302_residues MQRDLPPLRQGLASGRGTPAGALPPAPGAALRFQRHLLGDAAEDIPPATGFLAPGRRALASDPRDPRDPLPAAPPPSRAT ADPAPGTDGDAPPPATSALPAPPPPVDTPDLPAAFGMPRAGEAGLPAVPAARPDDGACQAGPEACPPPAGPATDAAAVPT CPPPPDPVPPPPPACGRQDGDASRQRGQDSGAGPSAASAPARPAAADAPAWLQDTVQRIAWLCAQADPAFQSWSVTVPMD PAVLPESEVALTLSPYAMSLRFRTRSCESARLISLHRDPLRAQLEALGPGQRGIDIDLESPP >Mature_302_residues MQRDLPPLRQGLASGRGTPAGALPPAPGAALRFQRHLLGDAAEDIPPATGFLAPGRRALASDPRDPRDPLPAAPPPSRAT ADPAPGTDGDAPPPATSALPAPPPPVDTPDLPAAFGMPRAGEAGLPAVPAARPDDGACQAGPEACPPPAGPATDAAAVPT CPPPPDPVPPPPPACGRQDGDASRQRGQDSGAGPSAASAPARPAAADAPAWLQDTVQRIAWLCAQADPAFQSWSVTVPMD PAVLPESEVALTLSPYAMSLRFRTRSCESARLISLHRDPLRAQLEALGPGQRGIDIDLESPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30614; Mature: 30614
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRDLPPLRQGLASGRGTPAGALPPAPGAALRFQRHLLGDAAEDIPPATGFLAPGRRALA CCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH SDPRDPRDPLPAAPPPSRATADPAPGTDGDAPPPATSALPAPPPPVDTPDLPAAFGMPRA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC GEAGLPAVPAARPDDGACQAGPEACPPPAGPATDAAAVPTCPPPPDPVPPPPPACGRQDG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DASRQRGQDSGAGPSAASAPARPAAADAPAWLQDTVQRIAWLCAQADPAFQSWSVTVPMD CHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCC PAVLPESEVALTLSPYAMSLRFRTRSCESARLISLHRDPLRAQLEALGPGQRGIDIDLES CCCCCCCCEEEEECCCEEEEEECCCCCCCCEEHHHHCCHHHHHHHHCCCCCCCEEEECCC PP CC >Mature Secondary Structure MQRDLPPLRQGLASGRGTPAGALPPAPGAALRFQRHLLGDAAEDIPPATGFLAPGRRALA CCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH SDPRDPRDPLPAAPPPSRATADPAPGTDGDAPPPATSALPAPPPPVDTPDLPAAFGMPRA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC GEAGLPAVPAARPDDGACQAGPEACPPPAGPATDAAAVPTCPPPPDPVPPPPPACGRQDG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DASRQRGQDSGAGPSAASAPARPAAADAPAWLQDTVQRIAWLCAQADPAFQSWSVTVPMD CHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCC PAVLPESEVALTLSPYAMSLRFRTRSCESARLISLHRDPLRAQLEALGPGQRGIDIDLES CCCCCCCCEEEEECCCEEEEEECCCCCCCCEEHHHHCCHHHHHHHHCCCCCCCEEEECCC PP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA