| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608969
Identifier: 120608969
GI number: 120608969
Start: 295225
End: 296172
Strand: Reverse
Name: 120608969
Synonym: Aave_0266
Alternate gene names: NA
Gene position: 296172-295225 (Counterclockwise)
Preceding gene: 120608974
Following gene: 120608964
Centisome position: 5.53
GC content: 71.31
Gene sequence:
>948_bases ATGACACATTCACTCCCCGCTTTCGCCTTCCGCGCCGTGTACGCCCTGCTGGCCCGGCTGCGCCCCCGCACGGCGGCGGC CTATGCCGGCAAGGCGCCGGCTGCGCCCGCCGCGCCGGACGAAGGGACCGGTGCCATTCCGCGCCGCATCTGGAGCTACT GGCACAGCGTGCAGCCCGATGCGTTCGTGGAGCGCTGCGTCGCCAACTGGCGCGCCCAGTGCCCGGGCTTCGAGGTGCAC GTGCTCAACCGACAGACGGTGCGCGACCGCGTGCCGCCTGGCGACTGGCCGGCAGGCTTCGAGCAGCTCGACCCCGTCAA GCAGTCGGACTGGATCCGGCTCTACCTGGTGAGCCGCTTCGGCGGCTACTGGCTGGATGCCACCGTGCTGCTGACCCGTC CGATCGACTGGCTGGAAGCGATGCGTGGCGCGCAGGGCGCCGATTTCGCGGGCTTCTATCTGCAGGGCTACACGCAGGAC GCGCAGTTCCCGGTGGTCGAGAACTGGACCTTCGGCGCGCCGTCCGGCGGCGCCTTCGTGACCGCGTGGCAGCGCGAATT CCACCATGCGCTCTTCGAGGTGGGCACGGCTGCCTATCTGGCGGCCCGGCAGGCCGAGCCCGGCTGGGAGGCGCTGCTGC AGGGCATTCCCGACCCGGTGTATCTGCTGGGGCACGTCACCGCGCAGCGGGTGCTGCGCCAGGGCGGCGCGGCCCATCGC CTGGCGCTGGCCAGGGCGGAAGACACGGCTTTCTTCTACCAGAAGGCCGTGGGCTGGAAGTGGTACCTGCTCTACCCGCG CCTCTGCCTGGTGCCGGCCGATGCGGAGGTGCCGCCGCTGGTCAAGCTGCGCGGCGGCGAGCGGCGGCATTTCGCGCAAC TCTTCGCACGGCATGGCGAACCCGGCTCGGACACCCTCTGGGGCCGTGCCTGCCGGCCACGGAAGTAA
Upstream 100 bases:
>100_bases TCGAACAATTGGCGCGGATCGTAACCCGGTGGCCAGCGTGCAGAATGCCGCCGTCGCGTATCCGGGCCTTTTGCTGCCAT TCGGTGCCTCTTCTGACTTC
Downstream 100 bases:
>100_bases GCCGGCACGGCAGCGTGGAAGGAGCGCCCGCGCGCCGGCCCGGGCAACCGGTCAGTGGCCTGCGCGGACCACTTCGCCCG CCTTCAGGCGGTACACCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MTHSLPAFAFRAVYALLARLRPRTAAAYAGKAPAAPAAPDEGTGAIPRRIWSYWHSVQPDAFVERCVANWRAQCPGFEVH VLNRQTVRDRVPPGDWPAGFEQLDPVKQSDWIRLYLVSRFGGYWLDATVLLTRPIDWLEAMRGAQGADFAGFYLQGYTQD AQFPVVENWTFGAPSGGAFVTAWQREFHHALFEVGTAAYLAARQAEPGWEALLQGIPDPVYLLGHVTAQRVLRQGGAAHR LALARAEDTAFFYQKAVGWKWYLLYPRLCLVPADAEVPPLVKLRGGERRHFAQLFARHGEPGSDTLWGRACRPRK
Sequences:
>Translated_315_residues MTHSLPAFAFRAVYALLARLRPRTAAAYAGKAPAAPAAPDEGTGAIPRRIWSYWHSVQPDAFVERCVANWRAQCPGFEVH VLNRQTVRDRVPPGDWPAGFEQLDPVKQSDWIRLYLVSRFGGYWLDATVLLTRPIDWLEAMRGAQGADFAGFYLQGYTQD AQFPVVENWTFGAPSGGAFVTAWQREFHHALFEVGTAAYLAARQAEPGWEALLQGIPDPVYLLGHVTAQRVLRQGGAAHR LALARAEDTAFFYQKAVGWKWYLLYPRLCLVPADAEVPPLVKLRGGERRHFAQLFARHGEPGSDTLWGRACRPRK >Mature_314_residues THSLPAFAFRAVYALLARLRPRTAAAYAGKAPAAPAAPDEGTGAIPRRIWSYWHSVQPDAFVERCVANWRAQCPGFEVHV LNRQTVRDRVPPGDWPAGFEQLDPVKQSDWIRLYLVSRFGGYWLDATVLLTRPIDWLEAMRGAQGADFAGFYLQGYTQDA QFPVVENWTFGAPSGGAFVTAWQREFHHALFEVGTAAYLAARQAEPGWEALLQGIPDPVYLLGHVTAQRVLRQGGAAHRL ALARAEDTAFFYQKAVGWKWYLLYPRLCLVPADAEVPPLVKLRGGERRHFAQLFARHGEPGSDTLWGRACRPRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35266; Mature: 35135
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHSLPAFAFRAVYALLARLRPRTAAAYAGKAPAAPAAPDEGTGAIPRRIWSYWHSVQPD CCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHH AFVERCVANWRAQCPGFEVHVLNRQTVRDRVPPGDWPAGFEQLDPVKQSDWIRLYLVSRF HHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCCCCHHHCCCCCCCCCEEEEEEHHC GGYWLDATVLLTRPIDWLEAMRGAQGADFAGFYLQGYTQDAQFPVVENWTFGAPSGGAFV CCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCCCEE TAWQREFHHALFEVGTAAYLAARQAEPGWEALLQGIPDPVYLLGHVTAQRVLRQGGAAHR HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHH LALARAEDTAFFYQKAVGWKWYLLYPRLCLVPADAEVPPLVKLRGGERRHFAQLFARHGE HHHHHHHHHHHHHHHHCCEEEEEECCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCC PGSDTLWGRACRPRK CCCCCCCCCCCCCCC >Mature Secondary Structure THSLPAFAFRAVYALLARLRPRTAAAYAGKAPAAPAAPDEGTGAIPRRIWSYWHSVQPD CCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHH AFVERCVANWRAQCPGFEVHVLNRQTVRDRVPPGDWPAGFEQLDPVKQSDWIRLYLVSRF HHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCCCCHHHCCCCCCCCCEEEEEEHHC GGYWLDATVLLTRPIDWLEAMRGAQGADFAGFYLQGYTQDAQFPVVENWTFGAPSGGAFV CCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEECCCCCCCCCCCCEE TAWQREFHHALFEVGTAAYLAARQAEPGWEALLQGIPDPVYLLGHVTAQRVLRQGGAAHR HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHH LALARAEDTAFFYQKAVGWKWYLLYPRLCLVPADAEVPPLVKLRGGERRHFAQLFARHGE HHHHHHHHHHHHHHHHCCEEEEEECCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCC PGSDTLWGRACRPRK CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA