| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608964
Identifier: 120608964
GI number: 120608964
Start: 291182
End: 291571
Strand: Reverse
Name: 120608964
Synonym: Aave_0261
Alternate gene names: NA
Gene position: 291571-291182 (Counterclockwise)
Preceding gene: 120608969
Following gene: 120608963
Centisome position: 5.45
GC content: 74.36
Gene sequence:
>390_bases ATGACCAAGAACACCGCACTTTCCGCATCGCGCCGCTGGCTGGTGGCCGCCCCGATCGCTCTGGCTTCGGTGCTGGCCCT GTCCGCCTGCGACCGCAACAAGGAAAGCAACGTGAACACCACGCCCTCCAGCACGCCGGCTCCGACCACCGCACCCGCCG CGTCCGACGCCGGCAGCATGGGTTCCGGCAGCACGGGCGGCACCGGCAGCATGGGCGGCACCGGCACCAGCTCCGGCGGC ATGGGTGCCGGCACGGGCACCACCACGGACGGCTCGACCGGCACCACCACCACCCCCTCCACACCGTCCTCCGGCGGTGC GGTCTTCGGCGGCACGGCGCCCACGCCCCTCGCCTCCGCGGCATCCGACGCCGCCAGCGCCGCGCGCTGA
Upstream 100 bases:
>100_bases CGTCGTCAACCCTATCCTACTCTGCGCGGGCGAAGCACTCCCTAGGATGGACCTCCCGGTGGCATGGCGCCGCCTTGTTT CCAGAACGGAGAACGAATCT
Downstream 100 bases:
>100_bases CGCATTTCTCCATTCCACGGGCGCGTACCGCGCCCGCAGCACAATAGCCCCTCGGGCCCGGCGCATCCATTTCTGTGCGC CGGGCGGTCCCGCGCCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MTKNTALSASRRWLVAAPIALASVLALSACDRNKESNVNTTPSSTPAPTTAPAASDAGSMGSGSTGGTGSMGGTGTSSGG MGAGTGTTTDGSTGTTTTPSTPSSGGAVFGGTAPTPLASAASDAASAAR
Sequences:
>Translated_129_residues MTKNTALSASRRWLVAAPIALASVLALSACDRNKESNVNTTPSSTPAPTTAPAASDAGSMGSGSTGGTGSMGGTGTSSGG MGAGTGTTTDGSTGTTTTPSTPSSGGAVFGGTAPTPLASAASDAASAAR >Mature_128_residues TKNTALSASRRWLVAAPIALASVLALSACDRNKESNVNTTPSSTPAPTTAPAASDAGSMGSGSTGGTGSMGGTGTSSGGM GAGTGTTTDGSTGTTTTPSTPSSGGAVFGGTAPTPLASAASDAASAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11899; Mature: 11768
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKNTALSASRRWLVAAPIALASVLALSACDRNKESNVNTTPSSTPAPTTAPAASDAGSM CCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSGSTGGTGSMGGTGTSSGGMGAGTGTTTDGSTGTTTTPSTPSSGGAVFGGTAPTPLASA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHH ASDAASAAR HHHHHHCCC >Mature Secondary Structure TKNTALSASRRWLVAAPIALASVLALSACDRNKESNVNTTPSSTPAPTTAPAASDAGSM CCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSGSTGGTGSMGGTGTSSGGMGAGTGTTTDGSTGTTTTPSTPSSGGAVFGGTAPTPLASA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHH ASDAASAAR HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA