| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608974
Identifier: 120608974
GI number: 120608974
Start: 300876
End: 301973
Strand: Reverse
Name: 120608974
Synonym: Aave_0271
Alternate gene names: NA
Gene position: 301973-300876 (Counterclockwise)
Preceding gene: 120608975
Following gene: 120608969
Centisome position: 5.64
GC content: 75.96
Gene sequence:
>1098_bases ATGCCGACGCCCGTCCCTCCATCCCGCCGCACTCCGCTGTTCGACCGCCTGGGCCTCACCCTGCCGATCGTGCAGGGCCC CATGACCGGCTCCGACACGCCCGCCCTGGCTGCCGCCGTGTCCGAAGCCGGCGGGCTGGGCATGCTGGGCTGCGGCATGC GCTCGCCCGCCGCCATGGCCGAAGCCGCCGCCGAAGTGCGCCGCCGCACGGCCCGCCCCTTCGGCATGAACCTCTTCGTG CTGGAGATGCCCGCGCCCGACGCCGCCACGGTGCGCGAAGCGCTGGACCGGCTGGCGCCGCTGTATGCCGACTTCGGGCT GGAGCCGGCCGTGCCCGCGCAATGGTGCGAAGACTTCGAGGCGCAGTTCGAGGCCCTGGTCGAGGCCCGCCCGGCCGTCG CGAGCTTCACCTTCGGCATCCTCGGCGCGCGCCAGGTGGAGCGGCTGCAGGCGGCGGGCTGCGTCGTGATCGGCACCGCC ACCACCGTGGCGGAGGCCCGTGCCTGGGCCGACGTGGGCGCCGATGCCGTCTGCGCCAGCGGGCTCGAGGCCGGCGGCCA CCGGGGCACCTTCCTGGCCGACTTCGAATCCAGCCAGGTCGGCACGCTGGCGCTGGTGCCGCCGTGCGTGGACGCGCTGC GCATTCCGGTCATCGCGGCCGGCGGCATCATGGACGGGCGCGGCATCGCCGCCGCGCAGGCCCTGGGTGCCGAAGGCGTC CAGATGGGCACGGCCTTCCTCGCGTGCCCCGAGTCGGCCATCGGCCCGGCCTACCGGGCCGCGCTGGCCCGGGCATGCGA AACCGATACGCGCATCACCCGGGTGTTCTCGGGCCGGCCCGCGCGCGGCATCGTCAACGCCACCATGGAACAGTTCGCCC CCTGGGAAGGCAGCGTGCCGGCCTACCCGGTGCAGAACGCACTGATGGGCCCGGTGCGCCGTGCGGCCGCCGCCCAGGGC CGTGCCGATGCGCTGGCCCTCTGGGCAGGCCAGGGCGTCGCGGCGGTGCGGCCGATGCCGGCCGGCGAACTGGTGGCGCT GCTGGCCAGGGAATGGCGGGCAGCGGCGGGCGGGGTCAGCGCGGGCTCGCCGGCGTGA
Upstream 100 bases:
>100_bases TGGATGCGCTGCTGGATGCGCTGCGCGACGTCCCTGCCGGCATGCCGCCGGGCGCCTGAAACCGACCACCCGCTGTTCCC AGCCCCCCCGGAGACCCGCC
Downstream 100 bases:
>100_bases CCGCGCCGGTTTCCGCCATGAGCTGCCGCGCGGCGATGCTGTCCGGAAGGTACAGGCCCCGCGCCAGATAGTCGTCCAGC CGCCTGCGGTCGGGCGCGCG
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MPTPVPPSRRTPLFDRLGLTLPIVQGPMTGSDTPALAAAVSEAGGLGMLGCGMRSPAAMAEAAAEVRRRTARPFGMNLFV LEMPAPDAATVREALDRLAPLYADFGLEPAVPAQWCEDFEAQFEALVEARPAVASFTFGILGARQVERLQAAGCVVIGTA TTVAEARAWADVGADAVCASGLEAGGHRGTFLADFESSQVGTLALVPPCVDALRIPVIAAGGIMDGRGIAAAQALGAEGV QMGTAFLACPESAIGPAYRAALARACETDTRITRVFSGRPARGIVNATMEQFAPWEGSVPAYPVQNALMGPVRRAAAAQG RADALALWAGQGVAAVRPMPAGELVALLAREWRAAAGGVSAGSPA
Sequences:
>Translated_365_residues MPTPVPPSRRTPLFDRLGLTLPIVQGPMTGSDTPALAAAVSEAGGLGMLGCGMRSPAAMAEAAAEVRRRTARPFGMNLFV LEMPAPDAATVREALDRLAPLYADFGLEPAVPAQWCEDFEAQFEALVEARPAVASFTFGILGARQVERLQAAGCVVIGTA TTVAEARAWADVGADAVCASGLEAGGHRGTFLADFESSQVGTLALVPPCVDALRIPVIAAGGIMDGRGIAAAQALGAEGV QMGTAFLACPESAIGPAYRAALARACETDTRITRVFSGRPARGIVNATMEQFAPWEGSVPAYPVQNALMGPVRRAAAAQG RADALALWAGQGVAAVRPMPAGELVALLAREWRAAAGGVSAGSPA >Mature_364_residues PTPVPPSRRTPLFDRLGLTLPIVQGPMTGSDTPALAAAVSEAGGLGMLGCGMRSPAAMAEAAAEVRRRTARPFGMNLFVL EMPAPDAATVREALDRLAPLYADFGLEPAVPAQWCEDFEAQFEALVEARPAVASFTFGILGARQVERLQAAGCVVIGTAT TVAEARAWADVGADAVCASGLEAGGHRGTFLADFESSQVGTLALVPPCVDALRIPVIAAGGIMDGRGIAAAQALGAEGVQ MGTAFLACPESAIGPAYRAALARACETDTRITRVFSGRPARGIVNATMEQFAPWEGSVPAYPVQNALMGPVRRAAAAQGR ADALALWAGQGVAAVRPMPAGELVALLAREWRAAAGGVSAGSPA
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=362, Percent_Identity=29.5580110497238, Blast_Score=122, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 37341; Mature: 37210
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPVPPSRRTPLFDRLGLTLPIVQGPMTGSDTPALAAAVSEAGGLGMLGCGMRSPAAMA CCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHH EAAAEVRRRTARPFGMNLFVLEMPAPDAATVREALDRLAPLYADFGLEPAVPAQWCEDFE HHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH AQFEALVEARPAVASFTFGILGARQVERLQAAGCVVIGTATTVAEARAWADVGADAVCAS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHCCHHHHHHH GLEAGGHRGTFLADFESSQVGTLALVPPCVDALRIPVIAAGGIMDGRGIAAAQALGAEGV HHHCCCCCCCEEEECCCCCCCEEEECCHHHHHHHCCEEEECCCCCCCCHHHHHHHCCCCH QMGTAFLACPESAIGPAYRAALARACETDTRITRVFSGRPARGIVNATMEQFAPWEGSVP HHCHHHEECCCHHCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCC AYPVQNALMGPVRRAAAAQGRADALALWAGQGVAAVRPMPAGELVALLAREWRAAAGGVS CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHCCCCC AGSPA CCCCC >Mature Secondary Structure PTPVPPSRRTPLFDRLGLTLPIVQGPMTGSDTPALAAAVSEAGGLGMLGCGMRSPAAMA CCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEECCCCCCHHHHH EAAAEVRRRTARPFGMNLFVLEMPAPDAATVREALDRLAPLYADFGLEPAVPAQWCEDFE HHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH AQFEALVEARPAVASFTFGILGARQVERLQAAGCVVIGTATTVAEARAWADVGADAVCAS HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHCCHHHHHHH GLEAGGHRGTFLADFESSQVGTLALVPPCVDALRIPVIAAGGIMDGRGIAAAQALGAEGV HHHCCCCCCCEEEECCCCCCCEEEECCHHHHHHHCCEEEECCCCCCCCHHHHHHHCCCCH QMGTAFLACPESAIGPAYRAALARACETDTRITRVFSGRPARGIVNATMEQFAPWEGSVP HHCHHHEECCCHHCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCC AYPVQNALMGPVRRAAAAQGRADALALWAGQGVAAVRPMPAGELVALLAREWRAAAGGVS CCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHCCCCC AGSPA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA