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The map label for this gene is ocd2 [H]

Identifier: 120608859

GI number: 120608859

Start: 165897

End: 166880

Strand: Reverse

Name: ocd2 [H]

Synonym: Aave_0151

Alternate gene names: 120608859

Gene position: 166880-165897 (Counterclockwise)

Preceding gene: 120608860

Following gene: 120608853

Centisome position: 3.12

GC content: 73.37

Gene sequence:

>984_bases
ATGACGGCCTCCACCACACGGGATGCGCGGCTGCTGCTGCTCACCAAGGACCACGTGGAACAGCTGCTGCAGCCGGAAGG
CGTGCTGGCCGCCGTGCGCGAGGCCTTCGTCCTGCTCAGCGAGCGGGCCGGCCGGGTGTTCCCGGTGGTGCGCGAGCGCC
TGGAGACGGGCGGCATCTTCGGCATCAAGTCCGGCGACGTGCCCTCGCAGGGGCTGCTCGGCTTCAAGGCGGCAGGGTTC
TGGCCTTCCAACCGCGCGCTCGGCGGCGAGCCGCACCAGGCCACGATCCTGTTGATCGACCCCGCCACCGGCCGGCCCAC
CTGCCTGATCGACGGCAACGCCATCACCACGGCGCGCACCGGTGCCGCGGGCGGCCACGGCCTGGCGCTGCTGGCGCGCC
CGGACAGCCGGCGGCTGTGCCTGTTCGGGACGGGCGTGCAGGCCGCCGTGCAGCTCACCTACGCCCTGCGGCTGCTGCCG
CATCTGCGGGACGTGCGGTACGTGACGGCCGACGGCCGGCCCGACCCGGCGTTCGAGCAGCGGTTCGCGGGGCAATGCCT
GCTGCGCCATTCGACGGACCGCAACGCGGACGTGGCCGCGAGCGACGTGGTGATCACCGCGACGCCGGGCGGCGGCCCGC
TCTTCGACCTGGACGCCGTGCGCCCCGGCACGCACCTGAACTGCGTGGGCGCCGACACCCGCGGCAAGCGCGAAGCGCCG
CAAGGCCTGCTGGACAAGGTCCGGATCTACGTCGATGACGAGGCCCAGGCCCGCCAGATCGGCGAGATGCAATGGGCCCC
CGGGGCCGCATGCACGGAAATCGGCGATGTGATGCGGGGGAGCGCCTCCGTGGACAGGCAGCCCGAAGACATCACGCTGT
TCGACATGACGGGCCTGGCCCTGCAGGACCTGACCGTGGCCCGGCTGGTGCAGGAGCAGGCGGGTGCCGCCGGGCTCGGG
CTGCCGGTGGCCTGGCCCTGGTGA

Upstream 100 bases:

>100_bases
ACCTGATCCAGGCCGGAACGGTCCACGAGAGCGAGGAGACGGTGGTGATCCTGACGGCCACCGGCATCAAGAATGCCGAT
GCCATCGCGGAGATGTTCGC

Downstream 100 bases:

>100_bases
CGTTCACGGCCCGCAAGGCATCGCCTCTTCCATTCACGCAGCCCGGGCGCGCTCCTGCGCGGGCGTCCTGCCGCACCACT
GCCGGCAGGCGCGCGCGAAG

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MTASTTRDARLLLLTKDHVEQLLQPEGVLAAVREAFVLLSERAGRVFPVVRERLETGGIFGIKSGDVPSQGLLGFKAAGF
WPSNRALGGEPHQATILLIDPATGRPTCLIDGNAITTARTGAAGGHGLALLARPDSRRLCLFGTGVQAAVQLTYALRLLP
HLRDVRYVTADGRPDPAFEQRFAGQCLLRHSTDRNADVAASDVVITATPGGGPLFDLDAVRPGTHLNCVGADTRGKREAP
QGLLDKVRIYVDDEAQARQIGEMQWAPGAACTEIGDVMRGSASVDRQPEDITLFDMTGLALQDLTVARLVQEQAGAAGLG
LPVAWPW

Sequences:

>Translated_327_residues
MTASTTRDARLLLLTKDHVEQLLQPEGVLAAVREAFVLLSERAGRVFPVVRERLETGGIFGIKSGDVPSQGLLGFKAAGF
WPSNRALGGEPHQATILLIDPATGRPTCLIDGNAITTARTGAAGGHGLALLARPDSRRLCLFGTGVQAAVQLTYALRLLP
HLRDVRYVTADGRPDPAFEQRFAGQCLLRHSTDRNADVAASDVVITATPGGGPLFDLDAVRPGTHLNCVGADTRGKREAP
QGLLDKVRIYVDDEAQARQIGEMQWAPGAACTEIGDVMRGSASVDRQPEDITLFDMTGLALQDLTVARLVQEQAGAAGLG
LPVAWPW
>Mature_326_residues
TASTTRDARLLLLTKDHVEQLLQPEGVLAAVREAFVLLSERAGRVFPVVRERLETGGIFGIKSGDVPSQGLLGFKAAGFW
PSNRALGGEPHQATILLIDPATGRPTCLIDGNAITTARTGAAGGHGLALLARPDSRRLCLFGTGVQAAVQLTYALRLLPH
LRDVRYVTADGRPDPAFEQRFAGQCLLRHSTDRNADVAASDVVITATPGGGPLFDLDAVRPGTHLNCVGADTRGKREAPQ
GLLDKVRIYVDDEAQARQIGEMQWAPGAACTEIGDVMRGSASVDRQPEDITLFDMTGLALQDLTVARLVQEQAGAAGLGL
PVAWPW

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI62241008, Length=270, Percent_Identity=28.8888888888889, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI4503065, Length=270, Percent_Identity=28.8888888888889, Blast_Score=107, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 34794; Mature: 34663

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASTTRDARLLLLTKDHVEQLLQPEGVLAAVREAFVLLSERAGRVFPVVRERLETGGIF
CCCCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEE
GIKSGDVPSQGLLGFKAAGFWPSNRALGGEPHQATILLIDPATGRPTCLIDGNAITTART
EEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCEEEEECC
GAAGGHGLALLARPDSRRLCLFGTGVQAAVQLTYALRLLPHLRDVRYVTADGRPDPAFEQ
CCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHH
RFAGQCLLRHSTDRNADVAASDVVITATPGGGPLFDLDAVRPGTHLNCVGADTRGKREAP
HHHCCEEEECCCCCCCCEEECCEEEEECCCCCCEEEECCCCCCCEEEEECCCCCCCCCCH
QGLLDKVRIYVDDEAQARQIGEMQWAPGAACTEIGDVMRGSASVDRQPEDITLFDMTGLA
HHHHEEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCH
LQDLTVARLVQEQAGAAGLGLPVAWPW
HHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TASTTRDARLLLLTKDHVEQLLQPEGVLAAVREAFVLLSERAGRVFPVVRERLETGGIF
CCCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEE
GIKSGDVPSQGLLGFKAAGFWPSNRALGGEPHQATILLIDPATGRPTCLIDGNAITTART
EEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCEEEEECC
GAAGGHGLALLARPDSRRLCLFGTGVQAAVQLTYALRLLPHLRDVRYVTADGRPDPAFEQ
CCCCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHH
RFAGQCLLRHSTDRNADVAASDVVITATPGGGPLFDLDAVRPGTHLNCVGADTRGKREAP
HHHCCEEEECCCCCCCCEEECCEEEEECCCCCCEEEECCCCCCCEEEEECCCCCCCCCCH
QGLLDKVRIYVDDEAQARQIGEMQWAPGAACTEIGDVMRGSASVDRQPEDITLFDMTGLA
HHHHEEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCH
LQDLTVARLVQEQAGAAGLGLPVAWPW
HHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]