| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is thrC [H]
Identifier: 120608860
GI number: 120608860
Start: 166877
End: 168004
Strand: Reverse
Name: thrC [H]
Synonym: Aave_0152
Alternate gene names: 120608860
Gene position: 168004-166877 (Counterclockwise)
Preceding gene: 120608871
Following gene: 120608859
Centisome position: 3.14
GC content: 68.53
Gene sequence:
>1128_bases ATGACGACTTCGCTCTACATCGACCCGGCCAGCGGCCGGACCTACCCCCTGGACGTGCCGCGGTGGTGCTCCGACGACCG CAAGCCGCTGCTGGTCACGCCGCAGCCCGGCATGTCGCGCGACGACATCGACCGCACGTGCCGCTCCCAGTGGCGCTACC GGGCATCGCTGCCGCTGGATGTCGCGCGCCCGATCTCCATGGGCGAGGGCTGCACGCCCCTCGTGCAGAAGGAATGGGGT GCCCACCGGCCATATTTCAAGCTCGAATGGTTCCACCCGACCGGCAGCTTCAAGGACCGCGGCACCACGGTGATGCTCTC CGTGCTGCGCCAGCAGGGCGTCGATGCGGTGCTGGAGGACAGCTCGGGCAACGGGGGTGCGTCGGTGTCCGCGTACGGTG CCGCGGGCGGCATGCGGGTGAAGATCCTCGCGCCGGCCTATGCCTCGAAGCCGAAGATCGCGCAAATGCGTGCCTACGGG GCGGAAGTGCAGCTGGTCGATGGGCCGCGCCAGGCCTGCGAGGACGAGGCGGTGCGGCAATCGGCCCACATCTTCTATTC GAGCCACAACTGGCAGCCCTTCTTCCTCGAAGGCACGAAGGCGATCGGCTACGAAATCTGGGAAGACCTGAATTTCCGCG CGCCGGACAACATCGTCATGCCCGCCGGGGCCGGCAGCAACGTGCTGGGGTGCTTCATGGCGTTTTCCGAGCTGCTGCGC GCGGGCCAGATCGCGAAGATGCCGCGCCTGTTCGTCTGCCAGCCGCTGAACTGCTCGCCGATCGACGCGAGCTTCCAGGC GGGCGTGACGACCCCGGTGGCGCGCGAGGTGCGCAAGACGGTGGCCGAGGGAACGGCGATTGCGCACCCCCTGCGGCTGC GGGAGCTCGTCTCGGCGGTGCAGGTCACCGGCGGCGCCACCGTGGCGCTGCAGGAGCAGGCCATCGTCGATGCGTTCAGG AAGGCGGCGCGCACGGGCCTGCTGCCCGAACTCACGTCTGCCACGGCGATCGCCGGGCTCGATCACCTGATCCAGGCCGG AACGGTCCACGAGAGCGAGGAGACGGTGGTGATCCTGACGGCCACCGGCATCAAGAATGCCGATGCCATCGCGGAGATGT TCGCATGA
Upstream 100 bases:
>100_bases GGGAGTGCTCCAGGAGGTCATGGACAGCTTCTGTCCAAAACCAAACATATTGTCTAATTTTGGATTTATCATCCACATCC GATTGCAGGAGAACCGAGAC
Downstream 100 bases:
>100_bases CGGCCTCCACCACACGGGATGCGCGGCTGCTGCTGCTCACCAAGGACCACGTGGAACAGCTGCTGCAGCCGGAAGGCGTG CTGGCCGCCGTGCGCGAGGC
Product: L-threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MTTSLYIDPASGRTYPLDVPRWCSDDRKPLLVTPQPGMSRDDIDRTCRSQWRYRASLPLDVARPISMGEGCTPLVQKEWG AHRPYFKLEWFHPTGSFKDRGTTVMLSVLRQQGVDAVLEDSSGNGGASVSAYGAAGGMRVKILAPAYASKPKIAQMRAYG AEVQLVDGPRQACEDEAVRQSAHIFYSSHNWQPFFLEGTKAIGYEIWEDLNFRAPDNIVMPAGAGSNVLGCFMAFSELLR AGQIAKMPRLFVCQPLNCSPIDASFQAGVTTPVAREVRKTVAEGTAIAHPLRLRELVSAVQVTGGATVALQEQAIVDAFR KAARTGLLPELTSATAIAGLDHLIQAGTVHESEETVVILTATGIKNADAIAEMFA
Sequences:
>Translated_375_residues MTTSLYIDPASGRTYPLDVPRWCSDDRKPLLVTPQPGMSRDDIDRTCRSQWRYRASLPLDVARPISMGEGCTPLVQKEWG AHRPYFKLEWFHPTGSFKDRGTTVMLSVLRQQGVDAVLEDSSGNGGASVSAYGAAGGMRVKILAPAYASKPKIAQMRAYG AEVQLVDGPRQACEDEAVRQSAHIFYSSHNWQPFFLEGTKAIGYEIWEDLNFRAPDNIVMPAGAGSNVLGCFMAFSELLR AGQIAKMPRLFVCQPLNCSPIDASFQAGVTTPVAREVRKTVAEGTAIAHPLRLRELVSAVQVTGGATVALQEQAIVDAFR KAARTGLLPELTSATAIAGLDHLIQAGTVHESEETVVILTATGIKNADAIAEMFA >Mature_374_residues TTSLYIDPASGRTYPLDVPRWCSDDRKPLLVTPQPGMSRDDIDRTCRSQWRYRASLPLDVARPISMGEGCTPLVQKEWGA HRPYFKLEWFHPTGSFKDRGTTVMLSVLRQQGVDAVLEDSSGNGGASVSAYGAAGGMRVKILAPAYASKPKIAQMRAYGA EVQLVDGPRQACEDEAVRQSAHIFYSSHNWQPFFLEGTKAIGYEIWEDLNFRAPDNIVMPAGAGSNVLGCFMAFSELLRA GQIAKMPRLFVCQPLNCSPIDASFQAGVTTPVAREVRKTVAEGTAIAHPLRLRELVSAVQVTGGATVALQEQAIVDAFRK AARTGLLPELTSATAIAGLDHLIQAGTVHESEETVVILTATGIKNADAIAEMFA
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 40609; Mature: 40478
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSLYIDPASGRTYPLDVPRWCSDDRKPLLVTPQPGMSRDDIDRTCRSQWRYRASLPLD CCCEEEEECCCCCEECCCCCHHCCCCCCCEEECCCCCCCHHHHHHHHHHHCEEECCCCCH VARPISMGEGCTPLVQKEWGAHRPYFKLEWFHPTGSFKDRGTTVMLSVLRQQGVDAVLED HCCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEC SSGNGGASVSAYGAAGGMRVKILAPAYASKPKIAQMRAYGAEVQLVDGPRQACEDEAVRQ CCCCCCCEEEEECCCCCEEEEEEECCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHHH SAHIFYSSHNWQPFFLEGTKAIGYEIWEDLNFRAPDNIVMPAGAGSNVLGCFMAFSELLR HEEEEEECCCCCEEEEECCHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHH AGQIAKMPRLFVCQPLNCSPIDASFQAGVTTPVAREVRKTVAEGTAIAHPLRLRELVSAV CCCHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH QVTGGATVALQEQAIVDAFRKAARTGLLPELTSATAIAGLDHLIQAGTVHESEETVVILT HHCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE ATGIKNADAIAEMFA ECCCCCHHHHHHHHC >Mature Secondary Structure TTSLYIDPASGRTYPLDVPRWCSDDRKPLLVTPQPGMSRDDIDRTCRSQWRYRASLPLD CCEEEEECCCCCEECCCCCHHCCCCCCCEEECCCCCCCHHHHHHHHHHHCEEECCCCCH VARPISMGEGCTPLVQKEWGAHRPYFKLEWFHPTGSFKDRGTTVMLSVLRQQGVDAVLED HCCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEC SSGNGGASVSAYGAAGGMRVKILAPAYASKPKIAQMRAYGAEVQLVDGPRQACEDEAVRQ CCCCCCCEEEEECCCCCEEEEEEECCCCCCCCHHHHHHCCCEEEEECCCHHHHHHHHHHH SAHIFYSSHNWQPFFLEGTKAIGYEIWEDLNFRAPDNIVMPAGAGSNVLGCFMAFSELLR HEEEEEECCCCCEEEEECCHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHH AGQIAKMPRLFVCQPLNCSPIDASFQAGVTTPVAREVRKTVAEGTAIAHPLRLRELVSAV CCCHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH QVTGGATVALQEQAIVDAFRKAARTGLLPELTSATAIAGLDHLIQAGTVHESEETVVILT HHCCCEEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE ATGIKNADAIAEMFA ECCCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]