Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598885

Identifier: 120598885

GI number: 120598885

Start: 2389065

End: 2390816

Strand: Direct

Name: 120598885

Synonym: Sputw3181_2077

Alternate gene names: NA

Gene position: 2389065-2390816 (Clockwise)

Preceding gene: 120598884

Following gene: 120598886

Centisome position: 50.74

GC content: 43.61

Gene sequence:

>1752_bases
ATGGGTAAACTCACTTTACTGACACTTGGATTATTGTTTAGCGGATTCATTTATGCCGCGCCAAGCCCTGTGCCATTGCT
TGTTGAGCAGTGTCTACGCTTACCTAGAATTGATTTAGCAGCAGCTTATGCAGAAGAGCAACTTCCTTTATCTATTGCAA
AGCAGGCATTGATCTTAGAGCAGCAAACCATTGGGCTTAATAATATCAATGATAGAGTGAATTATTACCGCGGGTTTACG
CTCTCCGCTGACGAGCGTTCTGGGTTATTACAATGCCAATTACGCCTTGCCGACACCTTGTCGGAACTCGTCAATCAAAC
TGAATTTCATCAGCTAACCCACGCTTTATCACAAGGTGATCGGGAGCAGATGCTGCTAAGCGGTAAGTTGCAATCACTGA
TAGACTCTCAGTTATCAATAACCGAAAAAGCAACACTACATACGGCTCAAGCGACGATAAGCCAAGGGTTAGCGAGTCAA
CAATTTAGTCTCGATATCCATGATAAAAAGTGCCAACTGATTACTGAAGATCAAACAGACGCGATCCTTGCATCACATGG
GGAAGAGGTTGCAGATACGCAACTGCGTCATTTTTCAGGTACGGTTGCCCACTATTTACTCAAACAACCACATCCTCAAT
GCCGCGCGCAAGTCTGGCAAGCTTATCAAGCTCGTGCACATCAGCGCAATCGCGATGCATTAAACCAGATTTTAGCACTT
CGTCAACAAACCGCTTGGGCCGCAGGCTTTGCCGATCACGCCAGTTTCAGCCTCAGTACACAACTCTTATCATCACCTGA
GCTTGTTAAGGCATTTCTCGATACTCAAACGCACTCAGTAGGGATAGCCCCTTGGGATCTTGGGCAAATATTGCCTCAAA
AGGCATTTGCACAAGCGCCGCAATTACTAACGGCACACATATTGGCTCAAAGTTTTGCTTATCTACAGCAATGGGGGCTC
CATTTTGAGCCTATTGAAACGATAAACATCCAAGAATCTTCACACCCAATATTTAGGGTTTACCACCAGCGCAGATTATT
AGGTGAACTCTATATTTCCTATGATGTTGCACGCCAGCGTCATCAGCAGCAAACGCTACGTCAAGGTGTTATCGGGCAGC
AATTTGGTCAACAAGCCTTAGATCTCAAACCTCAACTCAGTACGCACAAAGATGTTGAACAATTTACCCACGCTTTGGCC
CAAGCGGTAACATCGCTAGCAAAAGGTAGCCACTTTTACCTCAATAATACGCAAGATTCAATTCAGGAGAGCCATCATAT
TGGTAGTTTATGGTTAGCTGAAATACTTCAAAACGAACTGTTTCCACACTATGAACAAACCTATTTAAATGAACGCGAAA
TTCTTGTAAAAGCTTACACAAAGCAGCTCAAGGTATTTCGAGCCAAAGTAGCCCTGAACGTTTATCAAGCTCAATCTCAG
CAAAGCTATGGGGATCTCGCCACCGAGTTTACATACAGTTTTGGACAAGAGTGGTCACAAGTGGATGACTATCCATATAG
TTTTAATGCAATTGCCAATGAAGGGCCGCTTTACTATCAATCCCTTTGGCAAGAAGCGCTAGCAAAGCTCATCTATCAAA
TAACAGCCAATCGATCCGATAAACTCAGTTTATTTAATCTTCTCGTTGTAAACGAAGATTCACTTAGTTTAAGCGAACAA
TTAAGCGCATTTATCGAGGGGCCTACCGATCCAACGAGTCTTATTCAATATATTGCGAATATGTCGCGGTAA

Upstream 100 bases:

>100_bases
CTTGATCCCACTGATATCACTAAAACAATTGAGGGTTATCCAGCGCCTAAGCGAGCGACGATTATTGCAATAAAAAACCA
GCCTAACCAAGAAACAGTTA

Downstream 100 bases:

>100_bases
GCACATCCATTAGCGCAATAGTCTTTCATTTAATACCGTAATTTAATTGAAAAATAGATAAGAAGTCGACATTATAAGCT
AAATCTATCGCTTTTTTGGG

Product: peptidase M3A and M3B, thimet/oligopeptidase F

Products: NA

Alternate protein names: Peptidase M3A And M3B Thimet/Oligopeptidase F

Number of amino acids: Translated: 583; Mature: 582

Protein sequence:

>583_residues
MGKLTLLTLGLLFSGFIYAAPSPVPLLVEQCLRLPRIDLAAAYAEEQLPLSIAKQALILEQQTIGLNNINDRVNYYRGFT
LSADERSGLLQCQLRLADTLSELVNQTEFHQLTHALSQGDREQMLLSGKLQSLIDSQLSITEKATLHTAQATISQGLASQ
QFSLDIHDKKCQLITEDQTDAILASHGEEVADTQLRHFSGTVAHYLLKQPHPQCRAQVWQAYQARAHQRNRDALNQILAL
RQQTAWAAGFADHASFSLSTQLLSSPELVKAFLDTQTHSVGIAPWDLGQILPQKAFAQAPQLLTAHILAQSFAYLQQWGL
HFEPIETINIQESSHPIFRVYHQRRLLGELYISYDVARQRHQQQTLRQGVIGQQFGQQALDLKPQLSTHKDVEQFTHALA
QAVTSLAKGSHFYLNNTQDSIQESHHIGSLWLAEILQNELFPHYEQTYLNEREILVKAYTKQLKVFRAKVALNVYQAQSQ
QSYGDLATEFTYSFGQEWSQVDDYPYSFNAIANEGPLYYQSLWQEALAKLIYQITANRSDKLSLFNLLVVNEDSLSLSEQ
LSAFIEGPTDPTSLIQYIANMSR

Sequences:

>Translated_583_residues
MGKLTLLTLGLLFSGFIYAAPSPVPLLVEQCLRLPRIDLAAAYAEEQLPLSIAKQALILEQQTIGLNNINDRVNYYRGFT
LSADERSGLLQCQLRLADTLSELVNQTEFHQLTHALSQGDREQMLLSGKLQSLIDSQLSITEKATLHTAQATISQGLASQ
QFSLDIHDKKCQLITEDQTDAILASHGEEVADTQLRHFSGTVAHYLLKQPHPQCRAQVWQAYQARAHQRNRDALNQILAL
RQQTAWAAGFADHASFSLSTQLLSSPELVKAFLDTQTHSVGIAPWDLGQILPQKAFAQAPQLLTAHILAQSFAYLQQWGL
HFEPIETINIQESSHPIFRVYHQRRLLGELYISYDVARQRHQQQTLRQGVIGQQFGQQALDLKPQLSTHKDVEQFTHALA
QAVTSLAKGSHFYLNNTQDSIQESHHIGSLWLAEILQNELFPHYEQTYLNEREILVKAYTKQLKVFRAKVALNVYQAQSQ
QSYGDLATEFTYSFGQEWSQVDDYPYSFNAIANEGPLYYQSLWQEALAKLIYQITANRSDKLSLFNLLVVNEDSLSLSEQ
LSAFIEGPTDPTSLIQYIANMSR
>Mature_582_residues
GKLTLLTLGLLFSGFIYAAPSPVPLLVEQCLRLPRIDLAAAYAEEQLPLSIAKQALILEQQTIGLNNINDRVNYYRGFTL
SADERSGLLQCQLRLADTLSELVNQTEFHQLTHALSQGDREQMLLSGKLQSLIDSQLSITEKATLHTAQATISQGLASQQ
FSLDIHDKKCQLITEDQTDAILASHGEEVADTQLRHFSGTVAHYLLKQPHPQCRAQVWQAYQARAHQRNRDALNQILALR
QQTAWAAGFADHASFSLSTQLLSSPELVKAFLDTQTHSVGIAPWDLGQILPQKAFAQAPQLLTAHILAQSFAYLQQWGLH
FEPIETINIQESSHPIFRVYHQRRLLGELYISYDVARQRHQQQTLRQGVIGQQFGQQALDLKPQLSTHKDVEQFTHALAQ
AVTSLAKGSHFYLNNTQDSIQESHHIGSLWLAEILQNELFPHYEQTYLNEREILVKAYTKQLKVFRAKVALNVYQAQSQQ
SYGDLATEFTYSFGQEWSQVDDYPYSFNAIANEGPLYYQSLWQEALAKLIYQITANRSDKLSLFNLLVVNEDSLSLSEQL
SAFIEGPTDPTSLIQYIANMSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65817; Mature: 65686

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLTLLTLGLLFSGFIYAAPSPVPLLVEQCLRLPRIDLAAAYAEEQLPLSIAKQALILE
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHH
QQTIGLNNINDRVNYYRGFTLSADERSGLLQCQLRLADTLSELVNQTEFHQLTHALSQGD
HHHCCCCCCHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
REQMLLSGKLQSLIDSQLSITEKATLHTAQATISQGLASQQFSLDIHDKKCQLITEDQTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCH
AILASHGEEVADTQLRHFSGTVAHYLLKQPHPQCRAQVWQAYQARAHQRNRDALNQILAL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RQQTAWAAGFADHASFSLSTQLLSSPELVKAFLDTQTHSVGIAPWDLGQILPQKAFAQAP
HHHHHHHHCCHHHCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
QLLTAHILAQSFAYLQQWGLHFEPIETINIQESSHPIFRVYHQRRLLGELYISYDVARQR
HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HQQQTLRQGVIGQQFGQQALDLKPQLSTHKDVEQFTHALAQAVTSLAKGSHFYLNNTQDS
HHHHHHHHCHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHH
IQESHHIGSLWLAEILQNELFPHYEQTYLNEREILVKAYTKQLKVFRAKVALNVYQAQSQ
HHHHHCCHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSYGDLATEFTYSFGQEWSQVDDYPYSFNAIANEGPLYYQSLWQEALAKLIYQITANRSD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
KLSLFNLLVVNEDSLSLSEQLSAFIEGPTDPTSLIQYIANMSR
CEEEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
GKLTLLTLGLLFSGFIYAAPSPVPLLVEQCLRLPRIDLAAAYAEEQLPLSIAKQALILE
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHH
QQTIGLNNINDRVNYYRGFTLSADERSGLLQCQLRLADTLSELVNQTEFHQLTHALSQGD
HHHCCCCCCHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
REQMLLSGKLQSLIDSQLSITEKATLHTAQATISQGLASQQFSLDIHDKKCQLITEDQTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCH
AILASHGEEVADTQLRHFSGTVAHYLLKQPHPQCRAQVWQAYQARAHQRNRDALNQILAL
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RQQTAWAAGFADHASFSLSTQLLSSPELVKAFLDTQTHSVGIAPWDLGQILPQKAFAQAP
HHHHHHHHCCHHHCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
QLLTAHILAQSFAYLQQWGLHFEPIETINIQESSHPIFRVYHQRRLLGELYISYDVARQR
HHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HQQQTLRQGVIGQQFGQQALDLKPQLSTHKDVEQFTHALAQAVTSLAKGSHFYLNNTQDS
HHHHHHHHCHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHH
IQESHHIGSLWLAEILQNELFPHYEQTYLNEREILVKAYTKQLKVFRAKVALNVYQAQSQ
HHHHHCCHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSYGDLATEFTYSFGQEWSQVDDYPYSFNAIANEGPLYYQSLWQEALAKLIYQITANRSD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
KLSLFNLLVVNEDSLSLSEQLSAFIEGPTDPTSLIQYIANMSR
CEEEEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA