| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is yceG [C]
Identifier: 120598610
GI number: 120598610
Start: 2064688
End: 2065725
Strand: Direct
Name: yceG [C]
Synonym: Sputw3181_1794
Alternate gene names: 120598610
Gene position: 2064688-2065725 (Clockwise)
Preceding gene: 120598609
Following gene: 120598611
Centisome position: 43.85
GC content: 44.7
Gene sequence:
>1038_bases ATGAAAAAACTGATCCTGATTGCCAGTTCAACTCTACTTACCTTACTGACATTAGTTTGTTTAGTGGGTTACTGGGGTTA TCAAACTATTGTTGATTATAGTAATACACCACTGAACCTTGTTGAGCCTAAAGAGCTCACCATTGCACGAGGCACCAGTG TTAACCAACTTGCTCAGCAGTTAGCCGATGACGGCGTTATTCAAGACACATGGAAACTTAAATGGTTACTTAAGTTTCGC CCAGAGCTTGCCAAGATTCGTACAGGCCTTTATGAAATGTCGTCCTCACAAACCGTGATGGACTTACTCAACGACTTAGT GGCAGGTAAAGTCAAAATCTTCAGCATTACTTTAGTTGAAGGTAAAACCATTGCTGAGTGGGAACAACAGCTAGCAAGCG CACCACATTTACAAGTGACTCCAAAAGTATTTACTGCAGTATTAACAGAGCAGGGGGACGATTCCACTTTGCCAGAAGGT AAATTCTTCCCCGATACCTACCATTATACTGCCGAGGCGGATGCTAAAGTCATGCTGACTCAAAGTTATAAAATGATGGA GCAGGAGCTTGCTAAAGCGTGGGCGGAACGGGCGCCGAATTTGCCGTTAAAATCGCCCTATGAAATGCTGATTTTGGCAT CGATAGTCGAAAAGGAAACAGGCCAAGCCCATGAGCGTGAGCAAATCGCCGGTGTATTTGTTAATCGTCTGAATCTAGGT ATGCGTCTGCAAACCGATCCGACGGTGATTTACGGTATGGGCGATCGCTATAAGGGCAATATTACCCGCAAGGATTTAGT CGAAGAGACACCTTTTAATACCTATCGTATCTTTGGCTTACCGCCAACACCGATAGCTGCACCGAGTAAAGCATCCTTGA TGGCAGTGTCAAAGCCTGCGAGTGTGAGTTACCTTTATTTTGTATCGCGCAACGATGGCACCCATGTGTTCTCAACCACA CTAGAAGAACACAACCATGCTGTAGACATATATCAGCGTAAGATAAAACCGGCGCCCCCAGAAAAATCACCAAAGTAA
Upstream 100 bases:
>100_bases ACAGTGTTTTAGGTGTTGTGGATGTACTGGCGATAGATTCGCTTAAGTTCACTCGATCCCCTATAACCGCCAACCTTAGA CAGACACTTTCACTCACACT
Downstream 100 bases:
>100_bases AAATGCAGAGAAAGAAAATCTAATGTCAGTTCTTGCAAAATTTATCGTTATTGAAGGTTTAGAAGGCGCTGGTAAGTCGA GTGCAATTACCCTTATTCGG
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MKKLILIASSTLLTLLTLVCLVGYWGYQTIVDYSNTPLNLVEPKELTIARGTSVNQLAQQLADDGVIQDTWKLKWLLKFR PELAKIRTGLYEMSSSQTVMDLLNDLVAGKVKIFSITLVEGKTIAEWEQQLASAPHLQVTPKVFTAVLTEQGDDSTLPEG KFFPDTYHYTAEADAKVMLTQSYKMMEQELAKAWAERAPNLPLKSPYEMLILASIVEKETGQAHEREQIAGVFVNRLNLG MRLQTDPTVIYGMGDRYKGNITRKDLVEETPFNTYRIFGLPPTPIAAPSKASLMAVSKPASVSYLYFVSRNDGTHVFSTT LEEHNHAVDIYQRKIKPAPPEKSPK
Sequences:
>Translated_345_residues MKKLILIASSTLLTLLTLVCLVGYWGYQTIVDYSNTPLNLVEPKELTIARGTSVNQLAQQLADDGVIQDTWKLKWLLKFR PELAKIRTGLYEMSSSQTVMDLLNDLVAGKVKIFSITLVEGKTIAEWEQQLASAPHLQVTPKVFTAVLTEQGDDSTLPEG KFFPDTYHYTAEADAKVMLTQSYKMMEQELAKAWAERAPNLPLKSPYEMLILASIVEKETGQAHEREQIAGVFVNRLNLG MRLQTDPTVIYGMGDRYKGNITRKDLVEETPFNTYRIFGLPPTPIAAPSKASLMAVSKPASVSYLYFVSRNDGTHVFSTT LEEHNHAVDIYQRKIKPAPPEKSPK >Mature_345_residues MKKLILIASSTLLTLLTLVCLVGYWGYQTIVDYSNTPLNLVEPKELTIARGTSVNQLAQQLADDGVIQDTWKLKWLLKFR PELAKIRTGLYEMSSSQTVMDLLNDLVAGKVKIFSITLVEGKTIAEWEQQLASAPHLQVTPKVFTAVLTEQGDDSTLPEG KFFPDTYHYTAEADAKVMLTQSYKMMEQELAKAWAERAPNLPLKSPYEMLILASIVEKETGQAHEREQIAGVFVNRLNLG MRLQTDPTVIYGMGDRYKGNITRKDLVEETPFNTYRIFGLPPTPIAAPSKASLMAVSKPASVSYLYFVSRNDGTHVFSTT LEEHNHAVDIYQRKIKPAPPEKSPK
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=322, Percent_Identity=39.4409937888199, Blast_Score=234, Evalue=8e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 38655; Mature: 38655
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLILIASSTLLTLLTLVCLVGYWGYQTIVDYSNTPLNLVEPKELTIARGTSVNQLAQQ CCEEEEEECHHHHHHHHHHHHHHCCCHHEEEECCCCCCEEECCCEEEEECCCCHHHHHHH LADDGVIQDTWKLKWLLKFRPELAKIRTGLYEMSSSQTVMDLLNDLVAGKVKIFSITLVE HHCCCCEECHHHEEEHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEEEEC GKTIAEWEQQLASAPHLQVTPKVFTAVLTEQGDDSTLPEGKFFPDTYHYTAEADAKVMLT CCHHHHHHHHHHCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEH QSYKMMEQELAKAWAERAPNLPLKSPYEMLILASIVEKETGQAHEREQIAGVFVNRLNLG HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC MRLQTDPTVIYGMGDRYKGNITRKDLVEETPFNTYRIFGLPPTPIAAPSKASLMAVSKPA EEEECCCEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEECCCC SVSYLYFVSRNDGTHVFSTTLEEHNHAVDIYQRKIKPAPPEKSPK CEEEEEEEECCCCCEEEEEHHHHCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKKLILIASSTLLTLLTLVCLVGYWGYQTIVDYSNTPLNLVEPKELTIARGTSVNQLAQQ CCEEEEEECHHHHHHHHHHHHHHCCCHHEEEECCCCCCEEECCCEEEEECCCCHHHHHHH LADDGVIQDTWKLKWLLKFRPELAKIRTGLYEMSSSQTVMDLLNDLVAGKVKIFSITLVE HHCCCCEECHHHEEEHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEEEEEEC GKTIAEWEQQLASAPHLQVTPKVFTAVLTEQGDDSTLPEGKFFPDTYHYTAEADAKVMLT CCHHHHHHHHHHCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEEH QSYKMMEQELAKAWAERAPNLPLKSPYEMLILASIVEKETGQAHEREQIAGVFVNRLNLG HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC MRLQTDPTVIYGMGDRYKGNITRKDLVEETPFNTYRIFGLPPTPIAAPSKASLMAVSKPA EEEECCCEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEECCCC SVSYLYFVSRNDGTHVFSTTLEEHNHAVDIYQRKIKPAPPEKSPK CEEEEEEEECCCCCEEEEEHHHHCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]