| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120598463
Identifier: 120598463
GI number: 120598463
Start: 1887329
End: 1887826
Strand: Direct
Name: 120598463
Synonym: Sputw3181_1646
Alternate gene names: NA
Gene position: 1887329-1887826 (Clockwise)
Preceding gene: 120598462
Following gene: 120598464
Centisome position: 40.08
GC content: 41.57
Gene sequence:
>498_bases TTGGAAACCTATTTGAATTTCAGTCACATCACTTGGCTTGATGATCAAGGCCATATCAAACCTCCCATTTTCCTCTACGC GATTTTAGCTTTTTTAGCCCGCGGCTGGTGTATTTTTATCGCATCTTTAACACAGGCAAATGATAGGACTGAATTAGTAC GGATTTTTTACCCTGAAAAATCTGACTTTTTACTTGCCCTTGCCACAGGCTTTGGGGCTGTACTGCTTTATATTTTAGTG CTTTGTGAGCGTCGTCGTTCACCTCAATGGTTAAGCCCTTTTTTTGCACTCCTAAAATGGGGCTTATGGCCGTTGTTATT GGTGGATGCTGTTCTGCTTGGGCAACGATTGACGCATGGGCAGTTTATGTTTCACTGGAGCCTTGCTCTTGATGCACTTG TATTGTTTTGGTCCAGTTTATATGTTCTAAAATCGAAACGGCTTCATTATTATCTTGCCGATTGGCCTAAAATGGTGGAT GTTGGACCCAAAATATAA
Upstream 100 bases:
>100_bases CTTTTTTAATTCAGTGTTAAGTATTTGGTATCGGACGAAGAACCATTGAAATTGGCAGAATAGACACCATCTTACCTTTA CACTGTAGTTACTTCTTTAA
Downstream 100 bases:
>100_bases ATTATCTATCTGTTTGTAATTAAAAATGATTTCACATTATTGGCATAAGGTTTTTAGCATAGTGTGTGTTACCCCCCAGT TTGATAAGCATTTTTTGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues METYLNFSHITWLDDQGHIKPPIFLYAILAFLARGWCIFIASLTQANDRTELVRIFYPEKSDFLLALATGFGAVLLYILV LCERRRSPQWLSPFFALLKWGLWPLLLVDAVLLGQRLTHGQFMFHWSLALDALVLFWSSLYVLKSKRLHYYLADWPKMVD VGPKI
Sequences:
>Translated_165_residues METYLNFSHITWLDDQGHIKPPIFLYAILAFLARGWCIFIASLTQANDRTELVRIFYPEKSDFLLALATGFGAVLLYILV LCERRRSPQWLSPFFALLKWGLWPLLLVDAVLLGQRLTHGQFMFHWSLALDALVLFWSSLYVLKSKRLHYYLADWPKMVD VGPKI >Mature_165_residues METYLNFSHITWLDDQGHIKPPIFLYAILAFLARGWCIFIASLTQANDRTELVRIFYPEKSDFLLALATGFGAVLLYILV LCERRRSPQWLSPFFALLKWGLWPLLLVDAVLLGQRLTHGQFMFHWSLALDALVLFWSSLYVLKSKRLHYYLADWPKMVD VGPKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19234; Mature: 19234
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METYLNFSHITWLDDQGHIKPPIFLYAILAFLARGWCIFIASLTQANDRTELVRIFYPEK CCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHEEEEECCCC SDFLLALATGFGAVLLYILVLCERRRSPQWLSPFFALLKWGLWPLLLVDAVLLGQRLTHG CCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCC QFMFHWSLALDALVLFWSSLYVLKSKRLHYYLADWPKMVDVGPKI CCEEHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCCCCCC >Mature Secondary Structure METYLNFSHITWLDDQGHIKPPIFLYAILAFLARGWCIFIASLTQANDRTELVRIFYPEK CCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHEEEEECCCC SDFLLALATGFGAVLLYILVLCERRRSPQWLSPFFALLKWGLWPLLLVDAVLLGQRLTHG CCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCC QFMFHWSLALDALVLFWSSLYVLKSKRLHYYLADWPKMVDVGPKI CCEEHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA