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The map label for this gene is rpfG [H]

Identifier: 120598464

GI number: 120598464

Start: 1888045

End: 1889253

Strand: Direct

Name: rpfG [H]

Synonym: Sputw3181_1647

Alternate gene names: 120598464

Gene position: 1888045-1889253 (Clockwise)

Preceding gene: 120598463

Following gene: 120598465

Centisome position: 40.1

GC content: 44.42

Gene sequence:

>1209_bases
GTGGCAAAAGCAGCTCAACGAAAACTATTATTGTCTGAACTTCAGCTAGGGATGAGAGTGAAGTTGCCTTTGTCATGGAC
AAATCATCCCTTTTTATTCAATCGTGTAGATATAAACAGCCCTGCTCAAATTGAAATGATCCGCGGCTTGGGTGTGCCAT
ATGTTTTTTTACTCTCCGAAGTTAATACTAAGAGTGAACAACTTAGTACAGATAACAAAATCATTGAAGTTCAAGAACAA
CCCAAAACGGAACGGGATATTAAGAGTGCTACACGCAAAGCGATGCGTTTAAGCCAAAAGCGGTTTTTGGAAGGGGTTAA
TCAATGCCGCAATATGTTTGGTAAGATTGTGAGTGATCCTGAAGGGGCGTATCGGCAGTCGGCAACGTTAGTTGAAGAGA
TGTTGAGCCATTTACAGGAAGTGGAGCAGCCTTTCTTGACGTTGGTAGGAATGGATGAAAACGAGGTGAGTGTCACCCAA
CATGGCGTATCTGTTGCGGTGATTGCAATGATGATAGGTCATGCCCTTGATTTAACTCCTCGAGAGTTAAGAGATATTGC
CCTTGGTAGTTTGCTCCACGATATTGGTAAGTTGAAAGTGCCAGAGAATATTCGCCGAAAGCTCAGCGCTCTAACCACAA
ATGAAGCGAATTATTTGCAGATGCACCCCAATTTTGGTTATGACATGCTCAACCGCAGCGGCTTATTTCCCAAAGAAGTG
CTTAATATTGTGTTACACCACCATGAATTTATTGATGGTTCAGGTTTTCCTGATGGATTAACGGGCAATAAAATTCCCAT
CGTGACTCAGATTGTGGCCCTTGCAAATGATTTTGATCAGCATCTCAGTGGGCAGCAGGCTTCGTCACCCCAAGTTGCTT
TGGGCTACTTATTTAAAAATCGAGCCGCCAAGCACGCTGAGTCCTTAATCTCTGTACTGGTCAAAATTTTGGGTATTTAT
CCCCCAGGTACGATAGTTAAGCTCTCGGATGACTCCGTCGCGAAAGTGATCATGACGACAAAAGAGGTTGCACAACCCCA
AGTATGGGCTTGTAAGCCGGACGGCAGTGAGGCTTCATTGCGTTTTTTAAGTGAGGAGGGCGTAACAGTGCAAAAAGCAC
TCAAGGCTGAAGAGTTGACGGAGGGCGCGATTCGTACACTACAGGTCGATAAAGGTGTCAGTTTTTATTTTAGTGCGCTG
CAGGCTTGA

Upstream 100 bases:

>100_bases
CTTAATCATCTATAGTTATATGTACTTAGCTTGAATATGTTGGTTGATTCATGGTGTGCCTATCCATTTTCTTCCGCATA
TTTTAAAGGAGTCATATTGC

Downstream 100 bases:

>100_bases
ATCTTATCTATTAAGTTCCGTATTCTATCGGCTGATGTTGAATCTTCGGGGCGAATATGGCTGATGTAGTAGATAAGGGT
ATCTCACCAAAAAGTGTTGC

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MAKAAQRKLLLSELQLGMRVKLPLSWTNHPFLFNRVDINSPAQIEMIRGLGVPYVFLLSEVNTKSEQLSTDNKIIEVQEQ
PKTERDIKSATRKAMRLSQKRFLEGVNQCRNMFGKIVSDPEGAYRQSATLVEEMLSHLQEVEQPFLTLVGMDENEVSVTQ
HGVSVAVIAMMIGHALDLTPRELRDIALGSLLHDIGKLKVPENIRRKLSALTTNEANYLQMHPNFGYDMLNRSGLFPKEV
LNIVLHHHEFIDGSGFPDGLTGNKIPIVTQIVALANDFDQHLSGQQASSPQVALGYLFKNRAAKHAESLISVLVKILGIY
PPGTIVKLSDDSVAKVIMTTKEVAQPQVWACKPDGSEASLRFLSEEGVTVQKALKAEELTEGAIRTLQVDKGVSFYFSAL
QA

Sequences:

>Translated_402_residues
MAKAAQRKLLLSELQLGMRVKLPLSWTNHPFLFNRVDINSPAQIEMIRGLGVPYVFLLSEVNTKSEQLSTDNKIIEVQEQ
PKTERDIKSATRKAMRLSQKRFLEGVNQCRNMFGKIVSDPEGAYRQSATLVEEMLSHLQEVEQPFLTLVGMDENEVSVTQ
HGVSVAVIAMMIGHALDLTPRELRDIALGSLLHDIGKLKVPENIRRKLSALTTNEANYLQMHPNFGYDMLNRSGLFPKEV
LNIVLHHHEFIDGSGFPDGLTGNKIPIVTQIVALANDFDQHLSGQQASSPQVALGYLFKNRAAKHAESLISVLVKILGIY
PPGTIVKLSDDSVAKVIMTTKEVAQPQVWACKPDGSEASLRFLSEEGVTVQKALKAEELTEGAIRTLQVDKGVSFYFSAL
QA
>Mature_401_residues
AKAAQRKLLLSELQLGMRVKLPLSWTNHPFLFNRVDINSPAQIEMIRGLGVPYVFLLSEVNTKSEQLSTDNKIIEVQEQP
KTERDIKSATRKAMRLSQKRFLEGVNQCRNMFGKIVSDPEGAYRQSATLVEEMLSHLQEVEQPFLTLVGMDENEVSVTQH
GVSVAVIAMMIGHALDLTPRELRDIALGSLLHDIGKLKVPENIRRKLSALTTNEANYLQMHPNFGYDMLNRSGLFPKEVL
NIVLHHHEFIDGSGFPDGLTGNKIPIVTQIVALANDFDQHLSGQQASSPQVALGYLFKNRAAKHAESLISVLVKILGIYP
PGTIVKLSDDSVAKVIMTTKEVAQPQVWACKPDGSEASLRFLSEEGVTVQKALKAEELTEGAIRTLQVDKGVSFYFSALQ
A

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 44563; Mature: 44432

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAAQRKLLLSELQLGMRVKLPLSWTNHPFLFNRVDINSPAQIEMIRGLGVPYVFLLSE
CCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHH
VNTKSEQLSTDNKIIEVQEQPKTERDIKSATRKAMRLSQKRFLEGVNQCRNMFGKIVSDP
CCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EGAYRQSATLVEEMLSHLQEVEQPFLTLVGMDENEVSVTQHGVSVAVIAMMIGHALDLTP
CHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH
RELRDIALGSLLHDIGKLKVPENIRRKLSALTTNEANYLQMHPNFGYDMLNRSGLFPKEV
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHCCCCCCHHHH
LNIVLHHHEFIDGSGFPDGLTGNKIPIVTQIVALANDFDQHLSGQQASSPQVALGYLFKN
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
RAAKHAESLISVLVKILGIYPPGTIVKLSDDSVAKVIMTTKEVAQPQVWACKPDGSEASL
HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCHHHH
RFLSEEGVTVQKALKAEELTEGAIRTLQVDKGVSFYFSALQA
HHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHCC
>Mature Secondary Structure 
AKAAQRKLLLSELQLGMRVKLPLSWTNHPFLFNRVDINSPAQIEMIRGLGVPYVFLLSE
CCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHH
VNTKSEQLSTDNKIIEVQEQPKTERDIKSATRKAMRLSQKRFLEGVNQCRNMFGKIVSDP
CCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EGAYRQSATLVEEMLSHLQEVEQPFLTLVGMDENEVSVTQHGVSVAVIAMMIGHALDLTP
CHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH
RELRDIALGSLLHDIGKLKVPENIRRKLSALTTNEANYLQMHPNFGYDMLNRSGLFPKEV
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEECCCCCHHHHCCCCCCHHHH
LNIVLHHHEFIDGSGFPDGLTGNKIPIVTQIVALANDFDQHLSGQQASSPQVALGYLFKN
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
RAAKHAESLISVLVKILGIYPPGTIVKLSDDSVAKVIMTTKEVAQPQVWACKPDGSEASL
HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCHHHH
RFLSEEGVTVQKALKAEELTEGAIRTLQVDKGVSFYFSALQA
HHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]